Started job on | Jun 08 07:23:39
Started mapping on | Jun 08 07:25:29
Finished on | Jun 08 07:31:30
Mapping speed, Million of reads per hour | 287.05
Number of input reads | 28784902
Average input read length | 208
UNIQUE READS:
Uniquely mapped reads number | 26797922
Uniquely mapped reads % | 93.10%
Average mapped length | 208.00
Number of splices: Total | 15518541
Number of splices: Annotated (sjdb) | 15270262
Number of splices: GT/AG | 15342183
Number of splices: GC/AG | 113100
Number of splices: AT/AC | 10355
Number of splices: Non-canonical | 52903
Mismatch rate per base, % | 0.58%
Deletion rate per base | 0.01%
Deletion average length | 1.01
Insertion rate per base | 0.00%
Insertion average length | 1.56
MULTI-MAPPING READS:
Number of reads mapped to multiple loci | 1217522
% of reads mapped to multiple loci | 4.23%
Number of reads mapped to too many loci | 86070
% of reads mapped to too many loci | 0.30%
UNMAPPED READS:
Number of reads unmapped: too many mismatches | 90339
% of reads unmapped: too many mismatches | 0.31%
Number of reads unmapped: too short | 264675
% of reads unmapped: too short | 0.92%
Number of reads unmapped: other | 48145
% of reads unmapped: other | 0.17%
CHIMERIC READS:
Number of chimeric reads | 439075
% of chimeric reads | 1.53%