File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9d/bacb5ddad45aa89e83a2f8717ba1a2/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 09:35:35
                             Started mapping on |	Jun 08 09:41:05
                                    Finished on |	Jun 08 10:25:18
       Mapping speed, Million of reads per hour |	327.18

                          Number of input reads |	241112810
                      Average input read length |	246
                                    UNIQUE READS:
                   Uniquely mapped reads number |	231289766
                        Uniquely mapped reads % |	95.93%
                          Average mapped length |	245.85
                       Number of splices: Total |	238825711
            Number of splices: Annotated (sjdb) |	235619058
                       Number of splices: GT/AG |	236434434
                       Number of splices: GC/AG |	1290321
                       Number of splices: AT/AC |	125205
               Number of splices: Non-canonical |	975751
                      Mismatch rate per base, % |	0.28%
                         Deletion rate per base |	0.02%
                        Deletion average length |	2.00
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.76
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	7460586
             % of reads mapped to multiple loci |	3.09%
        Number of reads mapped to too many loci |	461450
             % of reads mapped to too many loci |	0.19%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	1590778
                 % of reads unmapped: too short |	0.66%
                Number of reads unmapped: other |	310230
                     % of reads unmapped: other |	0.13%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%