Started job on | Jun 08 10:22:02
Started mapping on | Jun 08 10:28:30
Finished on | Jun 08 12:34:08
Mapping speed, Million of reads per hour | 138.78
Number of input reads | 290592443
Average input read length | 218
UNIQUE READS:
Uniquely mapped reads number | 276461612
Uniquely mapped reads % | 95.14%
Average mapped length | 217.88
Number of splices: Total | 221351832
Number of splices: Annotated (sjdb) | 217230705
Number of splices: GT/AG | 218337822
Number of splices: GC/AG | 1555473
Number of splices: AT/AC | 142909
Number of splices: Non-canonical | 1315628
Mismatch rate per base, % | 0.39%
Deletion rate per base | 0.03%
Deletion average length | 2.13
Insertion rate per base | 0.00%
Insertion average length | 1.58
MULTI-MAPPING READS:
Number of reads mapped to multiple loci | 10507498
% of reads mapped to multiple loci | 3.62%
Number of reads mapped to too many loci | 651174
% of reads mapped to too many loci | 0.22%
UNMAPPED READS:
Number of reads unmapped: too many mismatches | 0
% of reads unmapped: too many mismatches | 0.00%
Number of reads unmapped: too short | 2115588
% of reads unmapped: too short | 0.73%
Number of reads unmapped: other | 856571
% of reads unmapped: other | 0.29%
CHIMERIC READS:
Number of chimeric reads | 0
% of chimeric reads | 0.00%