Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-eb5d3959-7137-45a9-9f26-41f9201dcf7f/9d/27ef28c083f97facc14cc8364be994/dummy_file_fusioncatcher.txt
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/23/fbd5dabbde1c92aa91a4484bffc665/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/23/fbd5dabbde1c92aa91a4484bffc665/.command.run
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/dc/f01e0374fccc6ae8b89ea133baf967/aih-tih-sc-e1cae1-R1_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/fusion_report_db
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1d/e0031281dc4d52592a278d01ffcc73/aih-tih-sc-e1cae1-R1_A23YTGFLT4_1.starfusion.starfusion.fusion_predictions.filtered_pass_only.tsv
==> STAGING COMPLETE (6 inputs)
[32mRunning application...[0m
RNF213--ENDOV
starfusion
arriba
TLK2P1--AC110079.1
starfusion
STX16--NPEPL1
starfusion
arriba
TVP23C--CDRT4
arriba
0%| | 0/4 [00:00<?, ?it/s]
Processing RNF213--ENDOV: 0%| | 0/4 [00:00<?, ?it/s]
Processing RNF213--ENDOV: 25%|██▌ | 1/4 [00:00<00:00, 9.09it/s]
Processing TLK2P1--AC110079.1: 25%|██▌ | 1/4 [00:00<00:00, 9.09it/s]
Processing TLK2P1--AC110079.1: 50%|█████ | 2/4 [00:00<00:00, 9.25it/s]
Processing STX16--NPEPL1: 50%|█████ | 2/4 [00:00<00:00, 9.25it/s]
Processing STX16--NPEPL1: 75%|███████▌ | 3/4 [00:00<00:00, 9.30it/s]
Processing TVP23C--CDRT4: 75%|███████▌ | 3/4 [00:00<00:00, 9.30it/s]
Processing TVP23C--CDRT4: 100%|██████████| 4/4 [00:00<00:00, 9.36it/s]
Processing TVP23C--CDRT4: 100%|██████████| 4/4 [00:00<00:00, 9.31it/s]
cat: fusion_report_db/DB-timestamp.txt: No such file or directory