File Info
- Filename
- aih-tih-sc-e1cae1-R1_A23YTGFLT4_1.fusions.csv
- Full Path
- s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/23/fbd5dabbde1c92aa91a4484bffc665/aih-tih-sc-e1cae1-R1_A23YTGFLT4_1.fusions.csv
- Size
- 1.1 KB
- Task
- NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (aih-tih-sc-e1cae1-R1_A23YTGFLT4_1)
- Attempt
Content
View in new tab| Fusion | Databases | Score | Explained score | arriba | starfusion |
| RNF213--ENDOV | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr17:80390196#chr17:80423520,reading-frame: in-frame,type: deletion/read-through,split_reads1: 163,split_reads2: 222,discordant_mates: 1,coverage1: 2840,coverage2: 3371,confidence: high | position: chr17:80390196:+#chr17:80423520:+,junction_reads: 47,spanning_reads: 0,ffmp: 0.2681 | |
| TLK2P1--AC110079.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:34039043:-#chr4:118595912:+,junction_reads: 10,spanning_reads: 0,ffmp: 0.0553 | ||
| STX16--NPEPL1 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr20:58673711#chr20:58691724,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 23,split_reads2: 27,discordant_mates: 0,coverage1: 2595,coverage2: 569,confidence: high | position: chr20:58673711:+#chr20:58691724:+,junction_reads: 8,spanning_reads: 0,ffmp: 0.0456 | |
| TVP23C--CDRT4 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr17:15503098#chr17:15440285,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 17,split_reads2: 14,discordant_mates: 0,coverage1: 797,coverage2: 298,confidence: high |
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