Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3b/6a80b4509cfbc6bb22fb0f92ca6b5f/aih-tih-sc-790e56-R1_A23YTGFLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/39d1e14e1381b95da636c8b2ce3530/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/39d1e14e1381b95da636c8b2ce3530/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory