File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/aa/eded6786c4a93711ae5f62ac14aef4/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:01:10
                             Started mapping on |	Jun 08 10:07:47
                                    Finished on |	Jun 08 11:10:58
       Mapping speed, Million of reads per hour |	281.26

                          Number of input reads |	296187060
                      Average input read length |	249
                                    UNIQUE READS:
                   Uniquely mapped reads number |	283895027
                        Uniquely mapped reads % |	95.85%
                          Average mapped length |	248.91
                       Number of splices: Total |	264314331
            Number of splices: Annotated (sjdb) |	260112917
                       Number of splices: GT/AG |	261176878
                       Number of splices: GC/AG |	1863219
                       Number of splices: AT/AC |	186708
               Number of splices: Non-canonical |	1087526
                      Mismatch rate per base, % |	0.22%
                         Deletion rate per base |	0.02%
                        Deletion average length |	2.05
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.79
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	9190850
             % of reads mapped to multiple loci |	3.10%
        Number of reads mapped to too many loci |	634476
             % of reads mapped to too many loci |	0.21%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2177006
                 % of reads unmapped: too short |	0.74%
                Number of reads unmapped: other |	289701
                     % of reads unmapped: other |	0.10%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%