AIH curated blacklist: matched 11 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 173
Pass (FILTER=PASS): 4 (2.3%)
Fail (FILTER=FAIL): 169 (97.7%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 11
All 11 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 31
confidence_below_min(low<high): 28
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 21
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 16
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 15
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 7
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 6
confidence_below_min(medium<high);aih_curated_blacklist: 5
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 3
confidence_below_min(low<high);aih_curated_blacklist: 3
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 2
Breakdown by confidence:
high: 4 pass, 3 fail (total: 7)
low: 0 pass, 101 fail (total: 101)
medium: 0 pass, 65 fail (total: 65)
Arriba filter: 173 rows -> 4 PASS; wrote aih-tih-sc-49909d-R1_A23YTGFLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-49909d-R1_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-49909d-R1_A23YTGFLT4_1.arriba.fusions.filter_summary.txt