Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ad/65cc6fefb50ba4a715021192bbfd25/aih-tih-sc-28eb14-R1_A23YTGFLT4_1_1.fastp.fastq.gz
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ad/65cc6fefb50ba4a715021192bbfd25/aih-tih-sc-28eb14-R1_A23YTGFLT4_1_2.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/23/dc8b38716a915ccf13d9ce8862dcc3/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/23/dc8b38716a915ccf13d9ce8862dcc3/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/48/0b405e7195aed83c0db02fdfe02b84/aih-tih-sc-28eb14-R1_A23YTGFLT4_1.Chimeric.out.junction
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.jredZNjfdC/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.jredZNjfdC/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.jredZNjfdC/./star-fusion.preliminary
-sample contains 296714219 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.jredZNjfdC/ctat_genome_lib_build_dir  -J /tmp/nxf.jredZNjfdC/aih-tih-sc-28eb14-R1_A23YTGFLT4_1.Chimeric.out.junction  -O /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.jredZNjfdC/aih-tih-sc-28eb14-R1_A23YTGFLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.jredZNjfdC/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[2190000], rate=53048.04/min -building interval tree based on /tmp/nxf.jredZNjfdC/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[2180000], rate=50717.33/min 
[2190000], rate=50753.19/min -building interval tree based on /tmp/nxf.jredZNjfdC/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=120000.00/min 
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[2180000], rate=43397.48/min 
[2190000], rate=43438.02/min -building interval tree based on /tmp/nxf.jredZNjfdC/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=60000.00/min 
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[2170000], rate=39695.12/min 
[2180000], rate=39781.02/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.jredZNjfdC/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 0.00 reads per min processed...  
 12000000.00 reads per min processed...  
 9000000.00 reads per min processed...  
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 5000000.00 reads per min processed...  
 4000000.00 reads per min processed...  
 3500000.00 reads per min processed...  
 3428571.43 reads per min processed...  
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 3000000.00 reads per min processed...  
 3142857.14 reads per min processed...  
 3000000.00 reads per min processed...  
 2888888.89 reads per min processed...  
 2896551.72 reads per min processed...  
 2812500.00 reads per min processed...  
 2742857.14 reads per min processed...  
 2756756.76 reads per min processed...  
 2700000.00 reads per min processed...  
 2651162.79 reads per min processed...  
 2666666.67 reads per min processed...  
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 2588235.29 reads per min processed...  
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 2526315.79 reads per min processed...  
 2500000.00 reads per min processed...  
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 2583333.33 reads per min processed...  
 2571428.57 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.jredZNjfdC/aih-tih-sc-28eb14-R1_A23YTGFLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.jredZNjfdC/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -1146727.112592
EM: Round [1] log likelihood: -1146288.294039
EM: Round [2] log likelihood: -1146139.672592
EM: Round [3] log likelihood: -1146069.839553
EM: Round [4] log likelihood: -1146032.953330
EM: Round [5] log likelihood: -1146012.037499
EM: Round [6] log likelihood: -1145999.484697
EM: Round [7] log likelihood: -1145991.552625
EM: Round [8] log likelihood: -1145986.293638
EM: Round [9] log likelihood: -1145982.650660
EM: Round [10] log likelihood: -1145980.027265
EM: Round [11] log likelihood: -1145978.073574
EM: Round [12] log likelihood: -1145976.576288
EM: Round [13] log likelihood: -1145975.400523
EM: Round [14] log likelihood: -1145974.458020
EM: Round [15] log likelihood: -1145973.689189
EM: Round [16] log likelihood: -1145973.052629
EM: Round [17] log likelihood: -1145972.518822
EM: Round [18] log likelihood: -1145972.066224
EM: Round [19] log likelihood: -1145971.678782
EM: Round [20] log likelihood: -1145971.344306
EM: Round [21] log likelihood: -1145971.053390
EM: Round [22] log likelihood: -1145970.798669
EM: Round [23] log likelihood: -1145970.574298
EM: Round [24] log likelihood: -1145970.375588
EM: Round [25] log likelihood: -1145970.198733
EM: Round [26] log likelihood: -1145970.040622
EM: Round [27] log likelihood: -1145969.898684
EM: Round [28] log likelihood: -1145969.770782
EM: Round [29] log likelihood: -1145969.655125
EM: Round [30] log likelihood: -1145969.550202
EM: Round [31] log likelihood: -1145969.454732
EM: Round [32] log likelihood: -1145969.367623
EM: Round [33] log likelihood: -1145969.287936
EM: Round [34] log likelihood: -1145969.214864
EM: Round [35] log likelihood: -1145969.147707
EM: Round [36] log likelihood: -1145969.085857
EM: Round [37] log likelihood: -1145969.028781
EM: Round [38] log likelihood: -1145968.976015
EM: Round [39] log likelihood: -1145968.927148
EM: Round [40] log likelihood: -1145968.881818
EM: Round [41] log likelihood: -1145968.839704
EM: Round [42] log likelihood: -1145968.800521
EM: Round [43] log likelihood: -1145968.764016
EM: Round [44] log likelihood: -1145968.729960
EM: Round [45] log likelihood: -1145968.698151
EM: Round [46] log likelihood: -1145968.668405
EM: Round [47] log likelihood: -1145968.640557
EM: Round [48] log likelihood: -1145968.614459
EM: Round [49] log likelihood: -1145968.589975
EM: Round [50] log likelihood: -1145968.566984
EM: Round [51] log likelihood: -1145968.545374
EM: Round [52] log likelihood: -1145968.525044
EM: Round [53] log likelihood: -1145968.505902
EM: Round [54] log likelihood: -1145968.487863
EM: Round [55] log likelihood: -1145968.470851
EM: Round [56] log likelihood: -1145968.454795
EM: Round [57] log likelihood: -1145968.439629
EM: Round [58] log likelihood: -1145968.425294
EM: Round [59] log likelihood: -1145968.411735
EM: Round [60] log likelihood: -1145968.398901
EM: Round [61] log likelihood: -1145968.386745
EM: Round [62] log likelihood: -1145968.375225
EM: Round [63] log likelihood: -1145968.364300
EM: Round [64] log likelihood: -1145968.353933
EM: Round [65] log likelihood: -1145968.344090
EM: Round [66] log likelihood: -1145968.334738
EM: Round [67] log likelihood: -1145968.325849
EM: Round [68] log likelihood: -1145968.317395
EM: Round [69] log likelihood: -1145968.309349
EM: Round [70] log likelihood: -1145968.301689
EM: Round [71] log likelihood: -1145968.294392
EM: Round [72] log likelihood: -1145968.287436
EM: Round [73] log likelihood: -1145968.280804
EM: Round [74] log likelihood: -1145968.274475
EM: Round [75] log likelihood: -1145968.268435
EM: Round [76] log likelihood: -1145968.262666
EM: Round [77] log likelihood: -1145968.257155
EM: Round [78] log likelihood: -1145968.251886
EM: Round [79] log likelihood: -1145968.246847
EM: Round [80] log likelihood: -1145968.242026
EM: Round [81] log likelihood: -1145968.237412
EM: Round [82] log likelihood: -1145968.232992
EM: Round [83] log likelihood: -1145968.228759
EM: Round [84] log likelihood: -1145968.224701
EM: Round [85] log likelihood: -1145968.220809
EM: Round [86] log likelihood: -1145968.217077
EM: Round [87] log likelihood: -1145968.213495
EM: Round [88] log likelihood: -1145968.210056
EM: Round [89] log likelihood: -1145968.206753
EM: Round [90] log likelihood: -1145968.203579
EM: Round [91] log likelihood: -1145968.200528
EM: Round [92] log likelihood: -1145968.197595
EM: Round [93] log likelihood: -1145968.194773
EM: Round [94] log likelihood: -1145968.192058
EM: Round [95] log likelihood: -1145968.189444
EM: Round [96] log likelihood: -1145968.186926
EM: Round [97] log likelihood: -1145968.184501
EM: Round [98] log likelihood: -1145968.182163
EM: Round [99] log likelihood: -1145968.179910
EM: Round [100] log likelihood: -1145968.177736
EM: Round [101] log likelihood: -1145968.175640
EM: Round [102] log likelihood: -1145968.173616
EM: Round [103] log likelihood: -1145968.171663
EM: Round [104] log likelihood: -1145968.169776
EM: Round [105] log likelihood: -1145968.167953
EM: Round [106] log likelihood: -1145968.166192
EM: Round [107] log likelihood: -1145968.164489
EM: Round [108] log likelihood: -1145968.162843
EM: Round [109] log likelihood: -1145968.161250
EM: Round [110] log likelihood: -1145968.159709
EM: Round [111] log likelihood: -1145968.158218
EM: Round [112] log likelihood: -1145968.156774
EM: Round [113] log likelihood: -1145968.155375
EM: Round [114] log likelihood: -1145968.154021
EM: Round [115] log likelihood: -1145968.152708
EM: Round [116] log likelihood: -1145968.151435
EM: Round [117] log likelihood: -1145968.150201
EM: Round [118] log likelihood: -1145968.149005
EM: Round [119] log likelihood: -1145968.147844
EM: Round [120] log likelihood: -1145968.146717
EM: Round [121] log likelihood: -1145968.145624
EM: Round [122] log likelihood: -1145968.144562
EM: Round [123] log likelihood: -1145968.143531
EM: Round [124] log likelihood: -1145968.142530
EM: Round [125] log likelihood: -1145968.141557
EM: Round [126] log likelihood: -1145968.140611
EM: Round [127] log likelihood: -1145968.139692
EM: Round [128] log likelihood: -1145968.138798
EM: Round [129] log likelihood: -1145968.137929
EM: Round [130] log likelihood: -1145968.137083
EM: Round [131] log likelihood: -1145968.136261
EM: Round [132] log likelihood: -1145968.135460
EM: Round [133] log likelihood: -1145968.134680
EM: Round [134] log likelihood: -1145968.133921
EM: Round [135] log likelihood: -1145968.133182
EM: Round [136] log likelihood: -1145968.132462
EM: Round [137] log likelihood: -1145968.131761
EM: Round [138] log likelihood: -1145968.131077
EM: Round [139] log likelihood: -1145968.130411
EM: Round [140] log likelihood: -1145968.129762
EM: Round [141] log likelihood: -1145968.129129
EM: Round [142] log likelihood: -1145968.128511
EM: Round [143] log likelihood: -1145968.127909
EM: Round [144] log likelihood: -1145968.127322
EM: Round [145] log likelihood: -1145968.126748
EM: Round [146] log likelihood: -1145968.126189
EM: Round [147] log likelihood: -1145968.125643
EM: Round [148] log likelihood: -1145968.125109
EM: Round [149] log likelihood: -1145968.124589
EM: Round [150] log likelihood: -1145968.124080
EM: Round [151] log likelihood: -1145968.123584
EM: Round [152] log likelihood: -1145968.123099
EM: Round [153] log likelihood: -1145968.122625
EM: Round [154] log likelihood: -1145968.122162
EM: Round [155] log likelihood: -1145968.121709
EM: Round [156] log likelihood: -1145968.121266
EM: Round [157] log likelihood: -1145968.120834
EM: Round [158] log likelihood: -1145968.120411
EM: Round [159] log likelihood: -1145968.119997
EM: Round [160] log likelihood: -1145968.119593
EM: Round [161] log likelihood: -1145968.119197
EM: Round [162] log likelihood: -1145968.118810
EM: Round [163] log likelihood: -1145968.118431
EM: Round [164] log likelihood: -1145968.118060
EM: Round [165] log likelihood: -1145968.117698
EM: Round [166] log likelihood: -1145968.117342
EM: Round [167] log likelihood: -1145968.116995
EM: Round [168] log likelihood: -1145968.116654
EM: Round [169] log likelihood: -1145968.116321
EM: Round [170] log likelihood: -1145968.115995
EM: Round [171] log likelihood: -1145968.115675
EM: Round [172] log likelihood: -1145968.115362
EM: Round [173] log likelihood: -1145968.115055
EM: Round [174] log likelihood: -1145968.114755
EM: Round [175] log likelihood: -1145968.114460
EM: Round [176] log likelihood: -1145968.114172
EM: Round [177] log likelihood: -1145968.113889
EM: Round [178] log likelihood: -1145968.113612
EM: Round [179] log likelihood: -1145968.113340
EM: Round [180] log likelihood: -1145968.113074
EM: Round [181] log likelihood: -1145968.112813
EM: Round [182] log likelihood: -1145968.112557
EM: Round [183] log likelihood: -1145968.112305
EM: Round [184] log likelihood: -1145968.112059
EM: Round [185] log likelihood: -1145968.111818
EM: Round [186] log likelihood: -1145968.111581
EM: Round [187] log likelihood: -1145968.111348
EM: Round [188] log likelihood: -1145968.111120
EM: Round [189] log likelihood: -1145968.110897
EM: Round [190] log likelihood: -1145968.110677
EM: Round [191] log likelihood: -1145968.110462
EM: Round [192] log likelihood: -1145968.110251
EM: Round [193] log likelihood: -1145968.110043
EM: Round [194] log likelihood: -1145968.109839
EM: Round [195] log likelihood: -1145968.109640
EM: Round [196] log likelihood: -1145968.109443
EM: Round [197] log likelihood: -1145968.109251
EM: Round [198] log likelihood: -1145968.109062
EM: Round [199] log likelihood: -1145968.108876
EM: Round [200] log likelihood: -1145968.108693
EM: Round [201] log likelihood: -1145968.108514
EM: Round [202] log likelihood: -1145968.108338
EM: Round [203] log likelihood: -1145968.108166
EM: Round [204] log likelihood: -1145968.107996
EM: Round [205] log likelihood: -1145968.107829
EM: Round [206] log likelihood: -1145968.107666
EM: Round [207] log likelihood: -1145968.107505
EM: Round [208] log likelihood: -1145968.107347
EM: Round [209] log likelihood: -1145968.107191
EM: Round [210] log likelihood: -1145968.107039
EM: Round [211] log likelihood: -1145968.106889
EM: Round [212] log likelihood: -1145968.106741
EM: Round [213] log likelihood: -1145968.106596
EM: Round [214] log likelihood: -1145968.106454
EM: Round [215] log likelihood: -1145968.106314
EM: Round [216] log likelihood: -1145968.106176
EM: Round [217] log likelihood: -1145968.106041
EM: Round [218] log likelihood: -1145968.105908
EM: Round [219] log likelihood: -1145968.105778
EM: Round [220] log likelihood: -1145968.105649
EM: Round [221] log likelihood: -1145968.105523
EM: Round [222] log likelihood: -1145968.105398
EM: Round [223] log likelihood: -1145968.105276
EM: Round [224] log likelihood: -1145968.105156
EM: Round [225] log likelihood: -1145968.105038
EM: Round [226] log likelihood: -1145968.104922
EM: Round [227] log likelihood: -1145968.104807
EM: Round [228] log likelihood: -1145968.104695
EM: Round [229] log likelihood: -1145968.104584
EM: Round [230] log likelihood: -1145968.104475
EM: Round [231] log likelihood: -1145968.104368
EM: Round [232] log likelihood: -1145968.104263
EM: Round [233] log likelihood: -1145968.104160
EM: Round [234] log likelihood: -1145968.104058
EM: Round [235] log likelihood: -1145968.103957
EM: Round [236] log likelihood: -1145968.103859
EM: Stopping iterations at round 236 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -1139108.148480
EM: Round [1] log likelihood: -1138744.430050
EM: Round [2] log likelihood: -1138626.278592
EM: Round [3] log likelihood: -1138573.044456
EM: Round [4] log likelihood: -1138545.704714
EM: Round [5] log likelihood: -1138530.548040
EM: Round [6] log likelihood: -1138521.648954
EM: Round [7] log likelihood: -1138516.147903
EM: Round [8] log likelihood: -1138512.577538
EM: Round [9] log likelihood: -1138510.152917
EM: Round [10] log likelihood: -1138508.438038
EM: Round [11] log likelihood: -1138507.181222
EM: Round [12] log likelihood: -1138506.231440
EM: Round [13] log likelihood: -1138505.494585
EM: Round [14] log likelihood: -1138504.909919
EM: Round [15] log likelihood: -1138504.436954
EM: Round [16] log likelihood: -1138504.047905
EM: Round [17] log likelihood: -1138503.723206
EM: Round [18] log likelihood: -1138503.448755
EM: Round [19] log likelihood: -1138503.214181
EM: Round [20] log likelihood: -1138503.011716
EM: Round [21] log likelihood: -1138502.835444
EM: Round [22] log likelihood: -1138502.680796
EM: Round [23] log likelihood: -1138502.544194
EM: Round [24] log likelihood: -1138502.422799
EM: Round [25] log likelihood: -1138502.314336
EM: Round [26] log likelihood: -1138502.216961
EM: Round [27] log likelihood: -1138502.129165
EM: Round [28] log likelihood: -1138502.049700
EM: Round [29] log likelihood: -1138501.977526
EM: Round [30] log likelihood: -1138501.911771
EM: Round [31] log likelihood: -1138501.851695
EM: Round [32] log likelihood: -1138501.796668
EM: Round [33] log likelihood: -1138501.746150
EM: Round [34] log likelihood: -1138501.699672
EM: Round [35] log likelihood: -1138501.656831
EM: Round [36] log likelihood: -1138501.617270
EM: Round [37] log likelihood: -1138501.580681
EM: Round [38] log likelihood: -1138501.546789
EM: Round [39] log likelihood: -1138501.515352
EM: Round [40] log likelihood: -1138501.486154
EM: Round [41] log likelihood: -1138501.459003
EM: Round [42] log likelihood: -1138501.433728
EM: Round [43] log likelihood: -1138501.410174
EM: Round [44] log likelihood: -1138501.388202
EM: Round [45] log likelihood: -1138501.367688
EM: Round [46] log likelihood: -1138501.348516
EM: Round [47] log likelihood: -1138501.330585
EM: Round [48] log likelihood: -1138501.313800
EM: Round [49] log likelihood: -1138501.298077
EM: Round [50] log likelihood: -1138501.283337
EM: Round [51] log likelihood: -1138501.269510
EM: Round [52] log likelihood: -1138501.256530
EM: Round [53] log likelihood: -1138501.244337
EM: Round [54] log likelihood: -1138501.232877
EM: Round [55] log likelihood: -1138501.222098
EM: Round [56] log likelihood: -1138501.211955
EM: Round [57] log likelihood: -1138501.202405
EM: Round [58] log likelihood: -1138501.193407
EM: Round [59] log likelihood: -1138501.184926
EM: Round [60] log likelihood: -1138501.176927
EM: Round [61] log likelihood: -1138501.169379
EM: Round [62] log likelihood: -1138501.162253
EM: Round [63] log likelihood: -1138501.155522
EM: Round [64] log likelihood: -1138501.149161
EM: Round [65] log likelihood: -1138501.143146
EM: Round [66] log likelihood: -1138501.137457
EM: Round [67] log likelihood: -1138501.132073
EM: Round [68] log likelihood: -1138501.126975
EM: Round [69] log likelihood: -1138501.122146
EM: Round [70] log likelihood: -1138501.117569
EM: Round [71] log likelihood: -1138501.113230
EM: Round [72] log likelihood: -1138501.109114
EM: Round [73] log likelihood: -1138501.105207
EM: Round [74] log likelihood: -1138501.101499
EM: Round [75] log likelihood: -1138501.097976
EM: Round [76] log likelihood: -1138501.094628
EM: Round [77] log likelihood: -1138501.091446
EM: Round [78] log likelihood: -1138501.088419
EM: Round [79] log likelihood: -1138501.085538
EM: Round [80] log likelihood: -1138501.082796
EM: Round [81] log likelihood: -1138501.080185
EM: Round [82] log likelihood: -1138501.077696
EM: Round [83] log likelihood: -1138501.075324
EM: Round [84] log likelihood: -1138501.073062
EM: Round [85] log likelihood: -1138501.070904
EM: Round [86] log likelihood: -1138501.068844
EM: Round [87] log likelihood: -1138501.066877
EM: Round [88] log likelihood: -1138501.064997
EM: Round [89] log likelihood: -1138501.063200
EM: Round [90] log likelihood: -1138501.061482
EM: Round [91] log likelihood: -1138501.059839
EM: Round [92] log likelihood: -1138501.058266
EM: Round [93] log likelihood: -1138501.056759
EM: Round [94] log likelihood: -1138501.055316
EM: Round [95] log likelihood: -1138501.053933
EM: Round [96] log likelihood: -1138501.052607
EM: Round [97] log likelihood: -1138501.051334
EM: Round [98] log likelihood: -1138501.050113
EM: Round [99] log likelihood: -1138501.048940
EM: Round [100] log likelihood: -1138501.047813
EM: Round [101] log likelihood: -1138501.046730
EM: Round [102] log likelihood: -1138501.045689
EM: Round [103] log likelihood: -1138501.044687
EM: Round [104] log likelihood: -1138501.043722
EM: Round [105] log likelihood: -1138501.042793
EM: Round [106] log likelihood: -1138501.041899
EM: Round [107] log likelihood: -1138501.041036
EM: Round [108] log likelihood: -1138501.040204
EM: Round [109] log likelihood: -1138501.039402
EM: Round [110] log likelihood: -1138501.038627
EM: Round [111] log likelihood: -1138501.037878
EM: Round [112] log likelihood: -1138501.037155
EM: Round [113] log likelihood: -1138501.036456
EM: Round [114] log likelihood: -1138501.035780
EM: Round [115] log likelihood: -1138501.035126
EM: Round [116] log likelihood: -1138501.034493
EM: Round [117] log likelihood: -1138501.033880
EM: Round [118] log likelihood: -1138501.033285
EM: Round [119] log likelihood: -1138501.032709
EM: Round [120] log likelihood: -1138501.032150
EM: Round [121] log likelihood: -1138501.031608
EM: Round [122] log likelihood: -1138501.031082
EM: Round [123] log likelihood: -1138501.030571
EM: Round [124] log likelihood: -1138501.030074
EM: Round [125] log likelihood: -1138501.029591
EM: Round [126] log likelihood: -1138501.029121
EM: Round [127] log likelihood: -1138501.028664
EM: Round [128] log likelihood: -1138501.028220
EM: Round [129] log likelihood: -1138501.027787
EM: Round [130] log likelihood: -1138501.027365
EM: Round [131] log likelihood: -1138501.026954
EM: Round [132] log likelihood: -1138501.026553
EM: Round [133] log likelihood: -1138501.026162
EM: Round [134] log likelihood: -1138501.025780
EM: Round [135] log likelihood: -1138501.025408
EM: Round [136] log likelihood: -1138501.025044
EM: Round [137] log likelihood: -1138501.024689
EM: Round [138] log likelihood: -1138501.024341
EM: Round [139] log likelihood: -1138501.024002
EM: Round [140] log likelihood: -1138501.023670
EM: Round [141] log likelihood: -1138501.023345
EM: Round [142] log likelihood: -1138501.023027
EM: Round [143] log likelihood: -1138501.022716
EM: Round [144] log likelihood: -1138501.022412
EM: Round [145] log likelihood: -1138501.022113
EM: Round [146] log likelihood: -1138501.021821
EM: Round [147] log likelihood: -1138501.021534
EM: Round [148] log likelihood: -1138501.021253
EM: Round [149] log likelihood: -1138501.020977
EM: Round [150] log likelihood: -1138501.020707
EM: Round [151] log likelihood: -1138501.020441
EM: Round [152] log likelihood: -1138501.020181
EM: Round [153] log likelihood: -1138501.019925
EM: Round [154] log likelihood: -1138501.019674
EM: Round [155] log likelihood: -1138501.019427
EM: Round [156] log likelihood: -1138501.019184
EM: Round [157] log likelihood: -1138501.018946
EM: Round [158] log likelihood: -1138501.018712
EM: Round [159] log likelihood: -1138501.018481
EM: Round [160] log likelihood: -1138501.018255
EM: Round [161] log likelihood: -1138501.018032
EM: Round [162] log likelihood: -1138501.017813
EM: Round [163] log likelihood: -1138501.017597
EM: Round [164] log likelihood: -1138501.017384
EM: Round [165] log likelihood: -1138501.017175
EM: Round [166] log likelihood: -1138501.016969
EM: Round [167] log likelihood: -1138501.016767
EM: Round [168] log likelihood: -1138501.016567
EM: Round [169] log likelihood: -1138501.016370
EM: Round [170] log likelihood: -1138501.016176
EM: Round [171] log likelihood: -1138501.015985
EM: Round [172] log likelihood: -1138501.015797
EM: Round [173] log likelihood: -1138501.015611
EM: Round [174] log likelihood: -1138501.015428
EM: Round [175] log likelihood: -1138501.015248
EM: Round [176] log likelihood: -1138501.015070
EM: Round [177] log likelihood: -1138501.014895
EM: Round [178] log likelihood: -1138501.014722
EM: Round [179] log likelihood: -1138501.014551
EM: Round [180] log likelihood: -1138501.014383
EM: Round [181] log likelihood: -1138501.014217
EM: Round [182] log likelihood: -1138501.014053
EM: Round [183] log likelihood: -1138501.013891
EM: Round [184] log likelihood: -1138501.013731
EM: Round [185] log likelihood: -1138501.013574
EM: Round [186] log likelihood: -1138501.013418
EM: Round [187] log likelihood: -1138501.013265
EM: Round [188] log likelihood: -1138501.013113
EM: Round [189] log likelihood: -1138501.012964
EM: Round [190] log likelihood: -1138501.012816
EM: Round [191] log likelihood: -1138501.012670
EM: Round [192] log likelihood: -1138501.012526
EM: Round [193] log likelihood: -1138501.012383
EM: Round [194] log likelihood: -1138501.012243
EM: Round [195] log likelihood: -1138501.012104
EM: Round [196] log likelihood: -1138501.011967
EM: Round [197] log likelihood: -1138501.011832
EM: Round [198] log likelihood: -1138501.011698
EM: Round [199] log likelihood: -1138501.011566
EM: Round [200] log likelihood: -1138501.011435
EM: Round [201] log likelihood: -1138501.011306
EM: Round [202] log likelihood: -1138501.011178
EM: Round [203] log likelihood: -1138501.011052
EM: Round [204] log likelihood: -1138501.010928
EM: Round [205] log likelihood: -1138501.010805
EM: Round [206] log likelihood: -1138501.010683
EM: Round [207] log likelihood: -1138501.010563
EM: Round [208] log likelihood: -1138501.010445
EM: Round [209] log likelihood: -1138501.010327
EM: Round [210] log likelihood: -1138501.010211
EM: Round [211] log likelihood: -1138501.010097
EM: Round [212] log likelihood: -1138501.009983
EM: Round [213] log likelihood: -1138501.009872
EM: Round [214] log likelihood: -1138501.009761
EM: Round [215] log likelihood: -1138501.009651
EM: Round [216] log likelihood: -1138501.009543
EM: Round [217] log likelihood: -1138501.009436
EM: Round [218] log likelihood: -1138501.009331
EM: Round [219] log likelihood: -1138501.009226
EM: Round [220] log likelihood: -1138501.009123
EM: Round [221] log likelihood: -1138501.009021
EM: Round [222] log likelihood: -1138501.008920
EM: Round [223] log likelihood: -1138501.008820
EM: Stopping iterations at round 223 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.jredZNjfdC/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.jredZNjfdC/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.jredZNjfdC/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 296714219 > /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.jredZNjfdC/ctat_genome_lib_build_dir > /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.jredZNjfdC/ctat_genome_lib_build_dir --annotate /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.jredZNjfdC/ctat_genome_lib_build_dir
-done, see /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.jredZNjfdC/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 2102, filtered: 9781)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.jredZNjfdC/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.jredZNjfdC/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000253361.3]
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WARNING, no entry stored in dbm for [ENSG00000257621.8]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000226240.2]
WARNING, no entry stored in dbm for [ENSG00000286591.1]
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WARNING, no entry stored in dbm for [ENSG00000236393.2]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000183822.3]
WARNING, no entry stored in dbm for [ENSG00000228801.6]
WARNING, no entry stored in dbm for [ENSG00000203761.5]
WARNING, no entry stored in dbm for [ENSG00000247151.7]
WARNING, no entry stored in dbm for [ENSG00000233459.1]
WARNING, no entry stored in dbm for [ENSG00000200156.1]
WARNING, no entry stored in dbm for [ENSG00000232596.3]
WARNING, no entry stored in dbm for [ENSG00000237604.1]
WARNING, no entry stored in dbm for [ENSG00000235499.1]
WARNING, no entry stored in dbm for [ENSG00000206228.4]
WARNING, no entry stored in dbm for [ENSG00000274605.2]
WARNING, no entry stored in dbm for [ENSG00000255146.1]
WARNING, no entry stored in dbm for [ENSG00000212719.13]
WARNING, no entry stored in dbm for [ENSG00000276116.2]
WARNING, no entry stored in dbm for [ENSG00000270518.2]
WARNING, no entry stored in dbm for [ENSG00000286907.1]
WARNING, no entry stored in dbm for [ENSG00000287516.1]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000255680.1]
WARNING, no entry stored in dbm for [ENSG00000247809.9]
WARNING, no entry stored in dbm for [ENSG00000214807.2]
WARNING, no entry stored in dbm for [ENSG00000226703.1]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000284966.3]
WARNING, no entry stored in dbm for [ENSG00000232729.8]
WARNING, no entry stored in dbm for [ENSG00000235033.7]
WARNING, no entry stored in dbm for [ENSG00000236526.1]
WARNING, no entry stored in dbm for [ENSG00000139239.7]
WARNING, no entry stored in dbm for [ENSG00000237406.1]
WARNING, no entry stored in dbm for [ENSG00000234039.2]
WARNING, no entry stored in dbm for [ENSG00000283117.1]
WARNING, no entry stored in dbm for [ENSG00000287291.1]
WARNING, no entry stored in dbm for [ENSG00000184669.9]
WARNING, no entry stored in dbm for [ENSG00000253333.1]
WARNING, no entry stored in dbm for [ENSG00000236703.1]
WARNING, no entry stored in dbm for [ENSG00000173209.23]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000214135.8]
WARNING, no entry stored in dbm for [ENSG00000236833.1]
WARNING, no entry stored in dbm for [ENSG00000249119.1]
WARNING, no entry stored in dbm for [ENSG00000235531.11]
WARNING, no entry stored in dbm for [ENSG00000241162.3]
WARNING, no entry stored in dbm for [ENSG00000266875.2]
WARNING, no entry stored in dbm for [ENSG00000240490.3]
WARNING, no entry stored in dbm for [ENSG00000251141.6]
WARNING, no entry stored in dbm for [ENSG00000287963.1]
WARNING, no entry stored in dbm for [ENSG00000224870.7]
WARNING, no entry stored in dbm for [ENSG00000226721.2]
WARNING, no entry stored in dbm for [ENSG00000236172.7]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000283498.1]
WARNING, no entry stored in dbm for [ENSG00000197744.5]
WARNING, no entry stored in dbm for [ENSG00000284378.1]
WARNING, no entry stored in dbm for [ENSG00000258414.1]
WARNING, no entry stored in dbm for [ENSG00000231434.1]
WARNING, no entry stored in dbm for [ENSG00000196312.15]
WARNING, no entry stored in dbm for [ENSG00000253557.6]
WARNING, no entry stored in dbm for [ENSG00000253369.2]
WARNING, no entry stored in dbm for [ENSG00000225746.13]
WARNING, no entry stored in dbm for [ENSG00000225746.13]
WARNING, no entry stored in dbm for [ENSG00000213777.5]
WARNING, no entry stored in dbm for [ENSG00000278182.1]
WARNING, no entry stored in dbm for [ENSG00000231689.2]
WARNING, no entry stored in dbm for [ENSG00000286295.1]
WARNING, no entry stored in dbm for [ENSG00000271978.1]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000279439.1]
WARNING, no entry stored in dbm for [ENSG00000231999.7]
WARNING, no entry stored in dbm for [ENSG00000125122.16]
WARNING, no entry stored in dbm for [ENSG00000284428.1]
WARNING, no entry stored in dbm for [ENSG00000254815.6]
WARNING, no entry stored in dbm for [ENSG00000255335.2]
WARNING, no entry stored in dbm for [ENSG00000251432.7]
WARNING, no entry stored in dbm for [ENSG00000241288.8]
WARNING, no entry stored in dbm for [ENSG00000281903.2]
WARNING, no entry stored in dbm for [ENSG00000259786.7]
WARNING, no entry stored in dbm for [ENSG00000267065.2]
WARNING, no entry stored in dbm for [ENSG00000239205.1]
WARNING, no entry stored in dbm for [ENSG00000226383.7]
WARNING, no entry stored in dbm for [ENSG00000236008.3]
WARNING, no entry stored in dbm for [ENSG00000223883.2]
WARNING, no entry stored in dbm for [ENSG00000214900.11]
WARNING, no entry stored in dbm for [ENSG00000214900.11]
WARNING, no entry stored in dbm for [ENSG00000237339.5]
WARNING, no entry stored in dbm for [ENSG00000225564.6]
WARNING, no entry stored in dbm for [ENSG00000215866.8]
WARNING, no entry stored in dbm for [ENSG00000251396.7]
WARNING, no entry stored in dbm for [ENSG00000247157.7]
WARNING, no entry stored in dbm for [ENSG00000231346.5]
WARNING, no entry stored in dbm for [ENSG00000228794.10]
WARNING, no entry stored in dbm for [ENSG00000235687.9]
WARNING, no entry stored in dbm for [ENSG00000235703.6]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000231419.6]
WARNING, no entry stored in dbm for [ENSG00000256271.1]
WARNING, no entry stored in dbm for [ENSG00000236854.2]
WARNING, no entry stored in dbm for [ENSG00000228295.2]
WARNING, no entry stored in dbm for [ENSG00000231028.9]
WARNING, no entry stored in dbm for [ENSG00000223768.2]
WARNING, no entry stored in dbm for [ENSG00000259527.2]
WARNING, no entry stored in dbm for [ENSG00000259527.2]
WARNING, no entry stored in dbm for [ENSG00000225370.1]
WARNING, no entry stored in dbm for [ENSG00000237854.3]
WARNING, no entry stored in dbm for [ENSG00000165121.11]
WARNING, no entry stored in dbm for [ENSG00000267374.2]
WARNING, no entry stored in dbm for [ENSG00000246067.8]
WARNING, no entry stored in dbm for [ENSG00000238223.1]
WARNING, no entry stored in dbm for [ENSG00000214930.2]
WARNING, no entry stored in dbm for [ENSG00000248971.2]
WARNING, no entry stored in dbm for [ENSG00000272077.1]
WARNING, no entry stored in dbm for [ENSG00000250412.1]
WARNING, no entry stored in dbm for [ENSG00000230832.3]
WARNING, no entry stored in dbm for [ENSG00000259994.1]
WARNING, no entry stored in dbm for [ENSG00000283972.1]
WARNING, no entry stored in dbm for [ENSG00000227874.1]
WARNING, no entry stored in dbm for [ENSG00000234420.7]
WARNING, no entry stored in dbm for [ENSG00000214870.9]
WARNING, no entry stored in dbm for [ENSG00000259673.6]
WARNING, no entry stored in dbm for [ENSG00000106610.15]
WARNING, no entry stored in dbm for [ENSG00000226002.1]
WARNING, no entry stored in dbm for [ENSG00000286084.2]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000214223.4]
WARNING, no entry stored in dbm for [ENSG00000254702.1]
WARNING, no entry stored in dbm for [ENSG00000226942.2]
WARNING, no entry stored in dbm for [ENSG00000251297.1]
WARNING, no entry stored in dbm for [ENSG00000205482.9]
WARNING, no entry stored in dbm for [ENSG00000244040.7]
WARNING, no entry stored in dbm for [ENSG00000270763.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000199664.1]
WARNING, no entry stored in dbm for [ENSG00000205940.8]
WARNING, no entry stored in dbm for [ENSG00000231434.1]
WARNING, no entry stored in dbm for [ENSG00000230647.2]
WARNING, no entry stored in dbm for [ENSG00000214145.7]
WARNING, no entry stored in dbm for [ENSG00000228063.2]
WARNING, no entry stored in dbm for [ENSG00000253552.8]
WARNING, no entry stored in dbm for [ENSG00000230330.1]
WARNING, no entry stored in dbm for [ENSG00000253774.1]
WARNING, no entry stored in dbm for [ENSG00000206341.7]
WARNING, no entry stored in dbm for [ENSG00000214558.4]
WARNING, no entry stored in dbm for [ENSG00000282508.2]
WARNING, no entry stored in dbm for [ENSG00000278239.1]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000250494.1]
WARNING, no entry stored in dbm for [ENSG00000258741.4]
WARNING, no entry stored in dbm for [ENSG00000232433.2]
WARNING, no entry stored in dbm for [ENSG00000239650.4]
WARNING, no entry stored in dbm for [ENSG00000108448.22]
WARNING, no entry stored in dbm for [ENSG00000226045.1]
WARNING, no entry stored in dbm for [ENSG00000227038.3]
WARNING, no entry stored in dbm for [ENSG00000255199.2]
WARNING, no entry stored in dbm for [ENSG00000277053.4]
WARNING, no entry stored in dbm for [ENSG00000215068.8]
WARNING, no entry stored in dbm for [ENSG00000154608.14]
WARNING, no entry stored in dbm for [ENSG00000174680.10]
WARNING, no entry stored in dbm for [ENSG00000230596.3]
WARNING, no entry stored in dbm for [ENSG00000236526.1]
WARNING, no entry stored in dbm for [ENSG00000269553.1]
WARNING, no entry stored in dbm for [ENSG00000267305.2]
WARNING, no entry stored in dbm for [ENSG00000231900.3]
WARNING, no entry stored in dbm for [ENSG00000134612.12]
WARNING, no entry stored in dbm for [ENSG00000263649.1]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000238105.7]
WARNING, no entry stored in dbm for [ENSG00000231434.1]
WARNING, no entry stored in dbm for [ENSG00000211451.12]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000231084.2]
WARNING, no entry stored in dbm for [ENSG00000250959.2]
WARNING, no entry stored in dbm for [ENSG00000278175.4]
WARNING, no entry stored in dbm for [ENSG00000227582.2]
WARNING, no entry stored in dbm for [ENSG00000267419.2]
WARNING, no entry stored in dbm for [ENSG00000257803.2]
WARNING, no entry stored in dbm for [ENSG00000254247.1]
WARNING, no entry stored in dbm for [ENSG00000287885.1]
WARNING, no entry stored in dbm for [ENSG00000232732.11]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000258464.2]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000231160.10]
WARNING, no entry stored in dbm for [ENSG00000198468.9]
WARNING, no entry stored in dbm for [ENSG00000200156.1]
WARNING, no entry stored in dbm for [ENSG00000175147.13]
WARNING, no entry stored in dbm for [ENSG00000223652.2]
WARNING, no entry stored in dbm for [ENSG00000227744.4]
WARNING, no entry stored in dbm for [ENSG00000254638.1]
WARNING, no entry stored in dbm for [ENSG00000254638.1]
WARNING, no entry stored in dbm for [ENSG00000244383.2]
WARNING, no entry stored in dbm for [ENSG00000250198.3]
WARNING, no entry stored in dbm for [ENSG00000231528.3]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000279616.1]
WARNING, no entry stored in dbm for [ENSG00000244952.2]
WARNING, no entry stored in dbm for [ENSG00000227304.3]
WARNING, no entry stored in dbm for [ENSG00000230314.7]
WARNING, no entry stored in dbm for [ENSG00000254016.3]
WARNING, no entry stored in dbm for [ENSG00000231672.8]
WARNING, no entry stored in dbm for [ENSG00000233300.1]
WARNING, no entry stored in dbm for [ENSG00000236698.1]
WARNING, no entry stored in dbm for [ENSG00000180229.12]
WARNING, no entry stored in dbm for [ENSG00000267943.1]
WARNING, no entry stored in dbm for [ENSG00000258792.4]
WARNING, no entry stored in dbm for [ENSG00000267506.5]
WARNING, no entry stored in dbm for [ENSG00000224652.2]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000233084.2]
WARNING, no entry stored in dbm for [ENSG00000228303.1]
WARNING, no entry stored in dbm for [ENSG00000235123.5]
WARNING, no entry stored in dbm for [ENSG00000248079.3]
WARNING, no entry stored in dbm for [ENSG00000284128.1]
WARNING, no entry stored in dbm for [ENSG00000232907.8]
WARNING, no entry stored in dbm for [ENSG00000233175.2]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000203364.2]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000259461.1]
WARNING, no entry stored in dbm for [ENSG00000226950.8]
WARNING, no entry stored in dbm for [ENSG00000251381.8]
WARNING, no entry stored in dbm for [ENSG00000226562.4]
WARNING, no entry stored in dbm for [ENSG00000255031.5]
WARNING, no entry stored in dbm for [ENSG00000215105.4]
WARNING, no entry stored in dbm for [ENSG00000234273.1]
WARNING, no entry stored in dbm for [ENSG00000233025.1]
WARNING, no entry stored in dbm for [ENSG00000259736.1]
WARNING, no entry stored in dbm for [ENSG00000236526.1]
WARNING, no entry stored in dbm for [ENSG00000237243.1]
WARNING, no entry stored in dbm for [ENSG00000270533.2]
WARNING, no entry stored in dbm for [ENSG00000270020.1]
WARNING, no entry stored in dbm for [ENSG00000272455.1]
WARNING, no entry stored in dbm for [ENSG00000236088.10]
WARNING, no entry stored in dbm for [ENSG00000235824.5]
WARNING, no entry stored in dbm for [ENSG00000177112.8]
WARNING, no entry stored in dbm for [ENSG00000244738.1]
WARNING, no entry stored in dbm for [ENSG00000232748.3]
WARNING, no entry stored in dbm for [ENSG00000256988.2]
WARNING, no entry stored in dbm for [ENSG00000224523.1]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000272990.1]
WARNING, no entry stored in dbm for [ENSG00000243389.1]
WARNING, no entry stored in dbm for [ENSG00000217769.4]
WARNING, no entry stored in dbm for [ENSG00000263345.1]
WARNING, no entry stored in dbm for [ENSG00000227617.9]
WARNING, no entry stored in dbm for [ENSG00000154608.14]
WARNING, no entry stored in dbm for [ENSG00000213753.11]
WARNING, no entry stored in dbm for [ENSG00000262081.2]
WARNING, no entry stored in dbm for [ENSG00000273828.2]
WARNING, no entry stored in dbm for [ENSG00000252010.1]
WARNING, no entry stored in dbm for [ENSG00000236526.1]
WARNING, no entry stored in dbm for [ENSG00000230711.2]
WARNING, no entry stored in dbm for [ENSG00000234936.1]
WARNING, no entry stored in dbm for [ENSG00000236830.7]
WARNING, no entry stored in dbm for [ENSG00000204054.14]
WARNING, no entry stored in dbm for [ENSG00000205771.6]
WARNING, no entry stored in dbm for [ENSG00000271821.1]
WARNING, no entry stored in dbm for [ENSG00000196166.5]
WARNING, no entry stored in dbm for [ENSG00000288596.2]
WARNING, no entry stored in dbm for [ENSG00000227145.2]
WARNING, no entry stored in dbm for [ENSG00000218175.2]
WARNING, no entry stored in dbm for [ENSG00000257985.1]
WARNING, no entry stored in dbm for [ENSG00000280424.1]
WARNING, no entry stored in dbm for [ENSG00000280424.1]
WARNING, no entry stored in dbm for [ENSG00000216657.1]
WARNING, no entry stored in dbm for [ENSG00000228730.2]
WARNING, no entry stored in dbm for [ENSG00000203414.2]
WARNING, no entry stored in dbm for [ENSG00000272742.1]
WARNING, no entry stored in dbm for [ENSG00000219547.1]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000286156.1]
WARNING, no entry stored in dbm for [ENSG00000237238.3]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000267422.1]
WARNING, no entry stored in dbm for [ENSG00000238153.1]
WARNING, no entry stored in dbm for [ENSG00000251136.9]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000249641.2]
WARNING, no entry stored in dbm for [ENSG00000215196.5]
WARNING, no entry stored in dbm for [ENSG00000259078.2]
WARNING, no entry stored in dbm for [ENSG00000278768.2]
WARNING, no entry stored in dbm for [ENSG00000184809.13]
WARNING, no entry stored in dbm for [ENSG00000227883.1]
WARNING, no entry stored in dbm for [ENSG00000271147.8]
WARNING, no entry stored in dbm for [ENSG00000271147.8]
WARNING, no entry stored in dbm for [ENSG00000271147.8]
WARNING, no entry stored in dbm for [ENSG00000215409.4]
WARNING, no entry stored in dbm for [ENSG00000280350.1]
WARNING, no entry stored in dbm for [ENSG00000254561.4]
WARNING, no entry stored in dbm for [ENSG00000254420.1]
WARNING, no entry stored in dbm for [ENSG00000254682.1]
WARNING, no entry stored in dbm for [ENSG00000224790.3]
WARNING, no entry stored in dbm for [ENSG00000273199.1]
WARNING, no entry stored in dbm for [ENSG00000246889.2]
WARNING, no entry stored in dbm for [ENSG00000246889.2]
WARNING, no entry stored in dbm for [ENSG00000261019.1]
WARNING, no entry stored in dbm for [ENSG00000254775.2]
WARNING, no entry stored in dbm for [ENSG00000275734.2]
WARNING, no entry stored in dbm for [ENSG00000177112.8]
WARNING, no entry stored in dbm for [ENSG00000260848.2]
WARNING, no entry stored in dbm for [ENSG00000253981.5]
WARNING, no entry stored in dbm for [ENSG00000286895.1]
WARNING, no entry stored in dbm for [ENSG00000235085.3]
WARNING, no entry stored in dbm for [ENSG00000286724.1]
WARNING, no entry stored in dbm for [ENSG00000285799.1]
WARNING, no entry stored in dbm for [ENSG00000254741.1]
WARNING, no entry stored in dbm for [ENSG00000230521.1]
WARNING, no entry stored in dbm for [ENSG00000228955.2]
WARNING, no entry stored in dbm for [ENSG00000285778.2]
WARNING, no entry stored in dbm for [ENSG00000286270.2]
WARNING, no entry stored in dbm for [ENSG00000285570.1]
WARNING, no entry stored in dbm for [ENSG00000228506.2]
WARNING, no entry stored in dbm for [ENSG00000229422.2]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000285280.2]
WARNING, no entry stored in dbm for [ENSG00000236512.1]
WARNING, no entry stored in dbm for [ENSG00000238122.1]
WARNING, no entry stored in dbm for [ENSG00000264044.1]
WARNING, no entry stored in dbm for [ENSG00000224356.5]
WARNING, no entry stored in dbm for [ENSG00000224356.5]
WARNING, no entry stored in dbm for [ENSG00000224356.5]
WARNING, no entry stored in dbm for [ENSG00000259033.2]
WARNING, no entry stored in dbm for [ENSG00000285796.1]
WARNING, no entry stored in dbm for [ENSG00000232905.2]
WARNING, no entry stored in dbm for [ENSG00000285907.1]
WARNING, no entry stored in dbm for [ENSG00000261060.1]
WARNING, no entry stored in dbm for [ENSG00000285257.1]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000287126.1]
WARNING, no entry stored in dbm for [ENSG00000228436.3]
WARNING, no entry stored in dbm for [ENSG00000230615.7]
WARNING, no entry stored in dbm for [ENSG00000287904.1]
WARNING, no entry stored in dbm for [ENSG00000217648.1]
WARNING, no entry stored in dbm for [ENSG00000257285.6]
WARNING, no entry stored in dbm for [ENSG00000271335.6]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000278822.1]
WARNING, no entry stored in dbm for [ENSG00000262528.2]
WARNING, no entry stored in dbm for [ENSG00000273253.2]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000215022.7]
WARNING, no entry stored in dbm for [ENSG00000231405.1]
WARNING, no entry stored in dbm for [ENSG00000178162.8]
WARNING, no entry stored in dbm for [ENSG00000232160.7]
WARNING, no entry stored in dbm for [ENSG00000279058.2]
WARNING, no entry stored in dbm for [ENSG00000225178.5]
WARNING, no entry stored in dbm for [ENSG00000259904.1]
WARNING, no entry stored in dbm for [ENSG00000172900.12]
WARNING, no entry stored in dbm for [ENSG00000279569.1]
WARNING, no entry stored in dbm for [ENSG00000235316.1]
WARNING, no entry stored in dbm for [ENSG00000236276.2]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000177410.13]
WARNING, no entry stored in dbm for [ENSG00000250878.3]
WARNING, no entry stored in dbm for [ENSG00000237017.1]
WARNING, no entry stored in dbm for [ENSG00000278936.1]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000246596.7]
WARNING, no entry stored in dbm for [ENSG00000233836.7]
WARNING, no entry stored in dbm for [ENSG00000233836.7]
WARNING, no entry stored in dbm for [ENSG00000250999.2]
WARNING, no entry stored in dbm for [ENSG00000250999.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000279880.1]
WARNING, no entry stored in dbm for [ENSG00000231546.1]
WARNING, no entry stored in dbm for [ENSG00000198555.7]
WARNING, no entry stored in dbm for [ENSG00000286743.1]
WARNING, no entry stored in dbm for [ENSG00000224660.2]
WARNING, no entry stored in dbm for [ENSG00000260261.2]
WARNING, no entry stored in dbm for [ENSG00000279608.1]
WARNING, no entry stored in dbm for [ENSG00000235421.1]
WARNING, no entry stored in dbm for [ENSG00000249244.1]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000239521.9]
WARNING, no entry stored in dbm for [ENSG00000277332.1]
WARNING, no entry stored in dbm for [ENSG00000232648.4]
WARNING, no entry stored in dbm for [ENSG00000261026.1]
WARNING, no entry stored in dbm for [ENSG00000241770.1]
WARNING, no entry stored in dbm for [ENSG00000224479.6]
WARNING, no entry stored in dbm for [ENSG00000286998.1]
WARNING, no entry stored in dbm for [ENSG00000265218.1]
WARNING, no entry stored in dbm for [ENSG00000131484.4]
WARNING, no entry stored in dbm for [ENSG00000238901.1]
WARNING, no entry stored in dbm for [ENSG00000225386.2]
WARNING, no entry stored in dbm for [ENSG00000228303.1]
WARNING, no entry stored in dbm for [ENSG00000228303.1]
WARNING, no entry stored in dbm for [ENSG00000266844.1]
WARNING, no entry stored in dbm for [ENSG00000240086.7]
WARNING, no entry stored in dbm for [ENSG00000284634.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000268362.6]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000253766.1]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000259363.6]
WARNING, no entry stored in dbm for [ENSG00000285632.1]
WARNING, no entry stored in dbm for [ENSG00000232499.2]
WARNING, no entry stored in dbm for [ENSG00000259820.1]
WARNING, no entry stored in dbm for [ENSG00000242536.2]
WARNING, no entry stored in dbm for [ENSG00000278981.1]
WARNING, no entry stored in dbm for [ENSG00000236513.1]
WARNING, no entry stored in dbm for [ENSG00000255686.1]
WARNING, no entry stored in dbm for [ENSG00000234129.8]
WARNING, no entry stored in dbm for [ENSG00000283537.2]
WARNING, no entry stored in dbm for [ENSG00000272693.4]
WARNING, no entry stored in dbm for [ENSG00000259299.1]
WARNING, no entry stored in dbm for [ENSG00000267711.1]
WARNING, no entry stored in dbm for [ENSG00000253125.1]
WARNING, no entry stored in dbm for [ENSG00000263624.1]
WARNING, no entry stored in dbm for [ENSG00000250251.6]
WARNING, no entry stored in dbm for [ENSG00000260035.1]
WARNING, no entry stored in dbm for [ENSG00000259932.1]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000259909.1]
WARNING, no entry stored in dbm for [ENSG00000254951.7]
WARNING, no entry stored in dbm for [ENSG00000267787.7]
WARNING, no entry stored in dbm for [ENSG00000257817.2]
WARNING, no entry stored in dbm for [ENSG00000248569.1]
WARNING, no entry stored in dbm for [ENSG00000286451.1]
WARNING, no entry stored in dbm for [ENSG00000258732.1]
WARNING, no entry stored in dbm for [ENSG00000180229.12]
WARNING, no entry stored in dbm for [ENSG00000259563.1]
WARNING, no entry stored in dbm for [ENSG00000251131.2]
WARNING, no entry stored in dbm for [ENSG00000259429.5]
WARNING, no entry stored in dbm for [ENSG00000215068.8]
WARNING, no entry stored in dbm for [ENSG00000214883.4]
WARNING, no entry stored in dbm for [ENSG00000248898.3]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000268516.2]
WARNING, no entry stored in dbm for [ENSG00000235978.6]
WARNING, no entry stored in dbm for [ENSG00000235978.6]
WARNING, no entry stored in dbm for [ENSG00000235978.6]
WARNING, no entry stored in dbm for [ENSG00000268047.1]
WARNING, no entry stored in dbm for [ENSG00000267062.1]
WARNING, no entry stored in dbm for [ENSG00000266573.6]
WARNING, no entry stored in dbm for [ENSG00000264920.2]
WARNING, no entry stored in dbm for [ENSG00000241556.1]
WARNING, no entry stored in dbm for [ENSG00000233862.7]
WARNING, no entry stored in dbm for [ENSG00000267605.7]
WARNING, no entry stored in dbm for [ENSG00000285582.1]
WARNING, no entry stored in dbm for [ENSG00000224746.2]
WARNING, no entry stored in dbm for [ENSG00000279036.1]
WARNING, no entry stored in dbm for [ENSG00000265125.5]
WARNING, no entry stored in dbm for [ENSG00000267723.1]
WARNING, no entry stored in dbm for [ENSG00000266983.1]
WARNING, no entry stored in dbm for [ENSG00000249839.1]
WARNING, no entry stored in dbm for [ENSG00000272622.2]
WARNING, no entry stored in dbm for [ENSG00000269439.6]
WARNING, no entry stored in dbm for [ENSG00000262732.1]
WARNING, no entry stored in dbm for [ENSG00000270804.1]
WARNING, no entry stored in dbm for [ENSG00000257489.6]
WARNING, no entry stored in dbm for [ENSG00000235726.7]
WARNING, no entry stored in dbm for [ENSG00000259933.6]
WARNING, no entry stored in dbm for [ENSG00000176593.8]
WARNING, no entry stored in dbm for [ENSG00000240388.2]
WARNING, no entry stored in dbm for [ENSG00000286741.1]
WARNING, no entry stored in dbm for [ENSG00000267633.1]
WARNING, no entry stored in dbm for [ENSG00000287611.1]
WARNING, no entry stored in dbm for [ENSG00000161132.6]
WARNING, no entry stored in dbm for [ENSG00000264421.1]
WARNING, no entry stored in dbm for [ENSG00000260850.2]
WARNING, no entry stored in dbm for [ENSG00000269318.1]
WARNING, no entry stored in dbm for [ENSG00000267575.7]
WARNING, no entry stored in dbm for [ENSG00000265630.2]
WARNING, no entry stored in dbm for [ENSG00000233619.1]
WARNING, no entry stored in dbm for [ENSG00000267436.1]
WARNING, no entry stored in dbm for [ENSG00000262879.6]
WARNING, no entry stored in dbm for [ENSG00000262879.6]
WARNING, no entry stored in dbm for [ENSG00000230882.1]
WARNING, no entry stored in dbm for [ENSG00000278920.1]
WARNING, no entry stored in dbm for [ENSG00000250778.1]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000243554.1]
WARNING, no entry stored in dbm for [ENSG00000228434.1]
WARNING, no entry stored in dbm for [ENSG00000272655.2]
WARNING, no entry stored in dbm for [ENSG00000255306.1]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000214870.9]
WARNING, no entry stored in dbm for [ENSG00000254180.2]
WARNING, no entry stored in dbm for [ENSG00000278922.1]
WARNING, no entry stored in dbm for [ENSG00000263271.1]
WARNING, no entry stored in dbm for [ENSG00000226383.7]
WARNING, no entry stored in dbm for [ENSG00000257759.2]
WARNING, no entry stored in dbm for [ENSG00000233064.2]


	* STAR-Fusion complete.  See output: /tmp/nxf.jredZNjfdC/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)