Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a2/1dcb33579091c4d73f7d283fd6a36f/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a8/f75c124a6e48eca19f43a142816839/aih-tih-sc-776623-R1_A23YTGFLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a2/1dcb33579091c4d73f7d283fd6a36f/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory