Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f7/dba10930bba1c7eecdf910c6a65f57/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f7/dba10930bba1c7eecdf910c6a65f57/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a3/44c0536fe3e1116b879afd049fd7c6/aih-tih-sc-790e56-R1_A23YTGFLT4_1_2.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a3/44c0536fe3e1116b879afd049fd7c6/aih-tih-sc-790e56-R1_A23YTGFLT4_1_1.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3b/6a80b4509cfbc6bb22fb0f92ca6b5f/aih-tih-sc-790e56-R1_A23YTGFLT4_1.Chimeric.out.junction
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.BGsP583Cu6/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.BGsP583Cu6/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary
-sample contains 169818666 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.BGsP583Cu6/ctat_genome_lib_build_dir  -J /tmp/nxf.BGsP583Cu6/aih-tih-sc-790e56-R1_A23YTGFLT4_1.Chimeric.out.junction  -O /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.BGsP583Cu6/aih-tih-sc-790e56-R1_A23YTGFLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.BGsP583Cu6/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[1350000], rate=71808.51/min -building interval tree based on /tmp/nxf.BGsP583Cu6/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[1340000], rate=70837.00/min -building interval tree based on /tmp/nxf.BGsP583Cu6/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=46153.85/min 
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[1350000], rate=67500.00/min -building interval tree based on /tmp/nxf.BGsP583Cu6/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[1030000], rate=56541.63/min 
[1040000], rate=56419.53/min 
[1050000], rate=56401.07/min 
[1060000], rate=56382.98/min 
[1070000], rate=56365.23/min 
[1080000], rate=56347.83/min 
[1090000], rate=56427.96/min 
[1100000], rate=56506.85/min 
[1110000], rate=56584.54/min 
[1120000], rate=56756.76/min 
[1130000], rate=56926.95/min 
[1140000], rate=57095.16/min 
[1150000], rate=57261.41/min 
[1160000], rate=57378.40/min 
[1170000], rate=56842.11/min 
[1180000], rate=56101.43/min 
[1190000], rate=55737.70/min 
[1200000], rate=55598.46/min 
[1210000], rate=55419.85/min 
[1220000], rate=55245.28/min 
[1230000], rate=54992.55/min 
[1240000], rate=54746.14/min 
[1250000], rate=54664.72/min 
[1260000], rate=54545.45/min 
[1270000], rate=54428.57/min 
[1280000], rate=54275.62/min 
[1290000], rate=54239.66/min 
[1300000], rate=54242.00/min 
[1310000], rate=54244.31/min 
[1320000], rate=54172.37/min 
[1330000], rate=53882.51/min 
[1340000], rate=53887.40/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.BGsP583Cu6/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 0.00 reads per min processed...  
 12000000.00 reads per min processed...  
 4500000.00 reads per min processed...  
 3428571.43 reads per min processed...  
 3000000.00 reads per min processed...  
 2769230.77 reads per min processed...  
 2625000.00 reads per min processed...  
 2526315.79 reads per min processed...  
 2454545.45 reads per min processed...  
 2400000.00 reads per min processed...  
 2357142.86 reads per min processed...  
 2250000.00 reads per min processed...  
 2166666.67 reads per min processed...  
 2153846.15 reads per min processed...  
 2093023.26 reads per min processed...  
 2086956.52 reads per min processed...  
 2081632.65 reads per min processed...  
 2076923.08 reads per min processed...  
 2111111.11 reads per min processed...  
 2105263.16 reads per min processed...  
 2065573.77 reads per min processed...  
 2062500.00 reads per min processed...  
 2059701.49 reads per min processed...  
 2086956.52 reads per min processed...  
 2142857.14 reads per min processed...  
 2166666.67 reads per min processed...  
 2160000.00 reads per min processed...  
 2153846.15 reads per min processed...  
 2175000.00 reads per min processed...  
 2168674.70 reads per min processed...  
 2162790.70 reads per min processed...  
 2157303.37 reads per min processed...  
 2152173.91 reads per min processed...  
 2170212.77 reads per min processed...  
 2164948.45 reads per min processed...  
 2160000.00 reads per min processed...  
 2155339.81 reads per min processed...  
 2150943.40 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.BGsP583Cu6/aih-tih-sc-790e56-R1_A23YTGFLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.BGsP583Cu6/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -598692.632385
EM: Round [1] log likelihood: -598439.786806
EM: Round [2] log likelihood: -598352.008866
EM: Round [3] log likelihood: -598311.999851
EM: Round [4] log likelihood: -598291.364313
EM: Round [5] log likelihood: -598279.847950
EM: Round [6] log likelihood: -598273.013159
EM: Round [7] log likelihood: -598268.732484
EM: Round [8] log likelihood: -598265.914719
EM: Round [9] log likelihood: -598263.972041
EM: Round [10] log likelihood: -598262.575015
EM: Round [11] log likelihood: -598261.532295
EM: Round [12] log likelihood: -598260.728801
EM: Round [13] log likelihood: -598260.092839
EM: Round [14] log likelihood: -598259.578150
EM: Round [15] log likelihood: -598259.153848
EM: Round [16] log likelihood: -598258.798641
EM: Round [17] log likelihood: -598258.497414
EM: Round [18] log likelihood: -598258.239154
EM: Round [19] log likelihood: -598258.015649
EM: Round [20] log likelihood: -598257.820657
EM: Round [21] log likelihood: -598257.649340
EM: Round [22] log likelihood: -598257.497898
EM: Round [23] log likelihood: -598257.363298
EM: Round [24] log likelihood: -598257.243094
EM: Round [25] log likelihood: -598257.135285
EM: Round [26] log likelihood: -598257.038225
EM: Round [27] log likelihood: -598256.950540
EM: Round [28] log likelihood: -598256.871078
EM: Round [29] log likelihood: -598256.798864
EM: Round [30] log likelihood: -598256.733067
EM: Round [31] log likelihood: -598256.672975
EM: Round [32] log likelihood: -598256.617972
EM: Round [33] log likelihood: -598256.567527
EM: Round [34] log likelihood: -598256.521173
EM: Round [35] log likelihood: -598256.478504
EM: Round [36] log likelihood: -598256.439163
EM: Round [37] log likelihood: -598256.402832
EM: Round [38] log likelihood: -598256.369232
EM: Round [39] log likelihood: -598256.338115
EM: Round [40] log likelihood: -598256.309258
EM: Round [41] log likelihood: -598256.282464
EM: Round [42] log likelihood: -598256.257555
EM: Round [43] log likelihood: -598256.234371
EM: Round [44] log likelihood: -598256.212769
EM: Round [45] log likelihood: -598256.192619
EM: Round [46] log likelihood: -598256.173804
EM: Round [47] log likelihood: -598256.156217
EM: Round [48] log likelihood: -598256.139763
EM: Round [49] log likelihood: -598256.124354
EM: Round [50] log likelihood: -598256.109910
EM: Round [51] log likelihood: -598256.096359
EM: Round [52] log likelihood: -598256.083634
EM: Round [53] log likelihood: -598256.071674
EM: Round [54] log likelihood: -598256.060426
EM: Round [55] log likelihood: -598256.049836
EM: Round [56] log likelihood: -598256.039860
EM: Round [57] log likelihood: -598256.030453
EM: Round [58] log likelihood: -598256.021578
EM: Round [59] log likelihood: -598256.013197
EM: Round [60] log likelihood: -598256.005277
EM: Round [61] log likelihood: -598255.997788
EM: Round [62] log likelihood: -598255.990701
EM: Round [63] log likelihood: -598255.983990
EM: Round [64] log likelihood: -598255.977630
EM: Round [65] log likelihood: -598255.971600
EM: Round [66] log likelihood: -598255.965877
EM: Round [67] log likelihood: -598255.960444
EM: Round [68] log likelihood: -598255.955283
EM: Round [69] log likelihood: -598255.950376
EM: Round [70] log likelihood: -598255.945708
EM: Round [71] log likelihood: -598255.941265
EM: Round [72] log likelihood: -598255.937034
EM: Round [73] log likelihood: -598255.933002
EM: Round [74] log likelihood: -598255.929158
EM: Round [75] log likelihood: -598255.925491
EM: Round [76] log likelihood: -598255.921991
EM: Round [77] log likelihood: -598255.918648
EM: Round [78] log likelihood: -598255.915453
EM: Round [79] log likelihood: -598255.912400
EM: Round [80] log likelihood: -598255.909479
EM: Round [81] log likelihood: -598255.906684
EM: Round [82] log likelihood: -598255.904008
EM: Round [83] log likelihood: -598255.901445
EM: Round [84] log likelihood: -598255.898989
EM: Round [85] log likelihood: -598255.896634
EM: Round [86] log likelihood: -598255.894375
EM: Round [87] log likelihood: -598255.892207
EM: Round [88] log likelihood: -598255.890126
EM: Round [89] log likelihood: -598255.888128
EM: Round [90] log likelihood: -598255.886208
EM: Round [91] log likelihood: -598255.884362
EM: Round [92] log likelihood: -598255.882587
EM: Round [93] log likelihood: -598255.880880
EM: Round [94] log likelihood: -598255.879238
EM: Round [95] log likelihood: -598255.877656
EM: Round [96] log likelihood: -598255.876134
EM: Round [97] log likelihood: -598255.874667
EM: Round [98] log likelihood: -598255.873253
EM: Round [99] log likelihood: -598255.871891
EM: Round [100] log likelihood: -598255.870577
EM: Round [101] log likelihood: -598255.869309
EM: Round [102] log likelihood: -598255.868087
EM: Round [103] log likelihood: -598255.866906
EM: Round [104] log likelihood: -598255.865767
EM: Round [105] log likelihood: -598255.864667
EM: Round [106] log likelihood: -598255.863604
EM: Round [107] log likelihood: -598255.862577
EM: Round [108] log likelihood: -598255.861584
EM: Round [109] log likelihood: -598255.860625
EM: Round [110] log likelihood: -598255.859697
EM: Round [111] log likelihood: -598255.858799
EM: Round [112] log likelihood: -598255.857931
EM: Round [113] log likelihood: -598255.857091
EM: Round [114] log likelihood: -598255.856277
EM: Round [115] log likelihood: -598255.855490
EM: Round [116] log likelihood: -598255.854728
EM: Round [117] log likelihood: -598255.853989
EM: Round [118] log likelihood: -598255.853274
EM: Round [119] log likelihood: -598255.852581
EM: Round [120] log likelihood: -598255.851909
EM: Round [121] log likelihood: -598255.851258
EM: Round [122] log likelihood: -598255.850627
EM: Round [123] log likelihood: -598255.850015
EM: Round [124] log likelihood: -598255.849421
EM: Round [125] log likelihood: -598255.848846
EM: Round [126] log likelihood: -598255.848287
EM: Round [127] log likelihood: -598255.847745
EM: Round [128] log likelihood: -598255.847219
EM: Round [129] log likelihood: -598255.846709
EM: Round [130] log likelihood: -598255.846213
EM: Round [131] log likelihood: -598255.845732
EM: Round [132] log likelihood: -598255.845265
EM: Round [133] log likelihood: -598255.844811
EM: Round [134] log likelihood: -598255.844370
EM: Round [135] log likelihood: -598255.843942
EM: Round [136] log likelihood: -598255.843526
EM: Round [137] log likelihood: -598255.843122
EM: Round [138] log likelihood: -598255.842729
EM: Round [139] log likelihood: -598255.842347
EM: Round [140] log likelihood: -598255.841976
EM: Round [141] log likelihood: -598255.841615
EM: Round [142] log likelihood: -598255.841265
EM: Round [143] log likelihood: -598255.840924
EM: Round [144] log likelihood: -598255.840592
EM: Round [145] log likelihood: -598255.840269
EM: Round [146] log likelihood: -598255.839955
EM: Round [147] log likelihood: -598255.839650
EM: Round [148] log likelihood: -598255.839353
EM: Round [149] log likelihood: -598255.839064
EM: Round [150] log likelihood: -598255.838782
EM: Round [151] log likelihood: -598255.838509
EM: Round [152] log likelihood: -598255.838242
EM: Round [153] log likelihood: -598255.837983
EM: Round [154] log likelihood: -598255.837730
EM: Round [155] log likelihood: -598255.837485
EM: Round [156] log likelihood: -598255.837245
EM: Round [157] log likelihood: -598255.837012
EM: Round [158] log likelihood: -598255.836785
EM: Round [159] log likelihood: -598255.836564
EM: Round [160] log likelihood: -598255.836349
EM: Round [161] log likelihood: -598255.836139
EM: Round [162] log likelihood: -598255.835935
EM: Round [163] log likelihood: -598255.835736
EM: Round [164] log likelihood: -598255.835542
EM: Round [165] log likelihood: -598255.835353
EM: Round [166] log likelihood: -598255.835169
EM: Round [167] log likelihood: -598255.834989
EM: Round [168] log likelihood: -598255.834814
EM: Round [169] log likelihood: -598255.834644
EM: Round [170] log likelihood: -598255.834477
EM: Round [171] log likelihood: -598255.834315
EM: Round [172] log likelihood: -598255.834157
EM: Round [173] log likelihood: -598255.834003
EM: Round [174] log likelihood: -598255.833853
EM: Round [175] log likelihood: -598255.833706
EM: Round [176] log likelihood: -598255.833564
EM: Round [177] log likelihood: -598255.833424
EM: Round [178] log likelihood: -598255.833288
EM: Round [179] log likelihood: -598255.833156
EM: Round [180] log likelihood: -598255.833026
EM: Round [181] log likelihood: -598255.832900
EM: Round [182] log likelihood: -598255.832777
EM: Round [183] log likelihood: -598255.832657
EM: Round [184] log likelihood: -598255.832540
EM: Round [185] log likelihood: -598255.832425
EM: Round [186] log likelihood: -598255.832313
EM: Round [187] log likelihood: -598255.832204
EM: Round [188] log likelihood: -598255.832098
EM: Round [189] log likelihood: -598255.831994
EM: Round [190] log likelihood: -598255.831893
EM: Round [191] log likelihood: -598255.831794
EM: Stopping iterations at round 191 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -597638.998354
EM: Round [1] log likelihood: -597445.544725
EM: Round [2] log likelihood: -597374.994354
EM: Round [3] log likelihood: -597342.867526
EM: Round [4] log likelihood: -597326.503490
EM: Round [5] log likelihood: -597317.494519
EM: Round [6] log likelihood: -597312.213262
EM: Round [7] log likelihood: -597308.940711
EM: Round [8] log likelihood: -597306.805252
EM: Round [9] log likelihood: -597305.342311
EM: Round [10] log likelihood: -597304.294305
EM: Round [11] log likelihood: -597303.513310
EM: Round [12] log likelihood: -597302.911384
EM: Round [13] log likelihood: -597302.434344
EM: Round [14] log likelihood: -597302.047559
EM: Round [15] log likelihood: -597301.728074
EM: Round [16] log likelihood: -597301.460137
EM: Round [17] log likelihood: -597301.232587
EM: Round [18] log likelihood: -597301.037290
EM: Round [19] log likelihood: -597300.868171
EM: Round [20] log likelihood: -597300.720592
EM: Round [21] log likelihood: -597300.590948
EM: Round [22] log likelihood: -597300.476392
EM: Round [23] log likelihood: -597300.374642
EM: Round [24] log likelihood: -597300.283849
EM: Round [25] log likelihood: -597300.202496
EM: Round [26] log likelihood: -597300.129328
EM: Round [27] log likelihood: -597300.063297
EM: Round [28] log likelihood: -597300.003521
EM: Round [29] log likelihood: -597299.949252
EM: Round [30] log likelihood: -597299.899852
EM: Round [31] log likelihood: -597299.854773
EM: Round [32] log likelihood: -597299.813542
EM: Round [33] log likelihood: -597299.775751
EM: Round [34] log likelihood: -597299.741042
EM: Round [35] log likelihood: -597299.709102
EM: Round [36] log likelihood: -597299.679659
EM: Round [37] log likelihood: -597299.652469
EM: Round [38] log likelihood: -597299.627320
EM: Round [39] log likelihood: -597299.604022
EM: Round [40] log likelihood: -597299.582407
EM: Round [41] log likelihood: -597299.562324
EM: Round [42] log likelihood: -597299.543639
EM: Round [43] log likelihood: -597299.526233
EM: Round [44] log likelihood: -597299.509996
EM: Round [45] log likelihood: -597299.494832
EM: Round [46] log likelihood: -597299.480653
EM: Round [47] log likelihood: -597299.467380
EM: Round [48] log likelihood: -597299.454941
EM: Round [49] log likelihood: -597299.443271
EM: Round [50] log likelihood: -597299.432311
EM: Round [51] log likelihood: -597299.422008
EM: Round [52] log likelihood: -597299.412313
EM: Round [53] log likelihood: -597299.403181
EM: Round [54] log likelihood: -597299.394572
EM: Round [55] log likelihood: -597299.386448
EM: Round [56] log likelihood: -597299.378775
EM: Round [57] log likelihood: -597299.371523
EM: Round [58] log likelihood: -597299.364661
EM: Round [59] log likelihood: -597299.358165
EM: Round [60] log likelihood: -597299.352009
EM: Round [61] log likelihood: -597299.346171
EM: Round [62] log likelihood: -597299.340632
EM: Round [63] log likelihood: -597299.335371
EM: Round [64] log likelihood: -597299.330371
EM: Round [65] log likelihood: -597299.325616
EM: Round [66] log likelihood: -597299.321090
EM: Round [67] log likelihood: -597299.316781
EM: Round [68] log likelihood: -597299.312674
EM: Round [69] log likelihood: -597299.308759
EM: Round [70] log likelihood: -597299.305023
EM: Round [71] log likelihood: -597299.301456
EM: Round [72] log likelihood: -597299.298050
EM: Round [73] log likelihood: -597299.294794
EM: Round [74] log likelihood: -597299.291680
EM: Round [75] log likelihood: -597299.288701
EM: Round [76] log likelihood: -597299.285848
EM: Round [77] log likelihood: -597299.283117
EM: Round [78] log likelihood: -597299.280499
EM: Round [79] log likelihood: -597299.277989
EM: Round [80] log likelihood: -597299.275582
EM: Round [81] log likelihood: -597299.273271
EM: Round [82] log likelihood: -597299.271053
EM: Round [83] log likelihood: -597299.268923
EM: Round [84] log likelihood: -597299.266875
EM: Round [85] log likelihood: -597299.264907
EM: Round [86] log likelihood: -597299.263014
EM: Round [87] log likelihood: -597299.261193
EM: Round [88] log likelihood: -597299.259441
EM: Round [89] log likelihood: -597299.257753
EM: Round [90] log likelihood: -597299.256128
EM: Round [91] log likelihood: -597299.254562
EM: Round [92] log likelihood: -597299.253052
EM: Round [93] log likelihood: -597299.251597
EM: Round [94] log likelihood: -597299.250193
EM: Round [95] log likelihood: -597299.248839
EM: Round [96] log likelihood: -597299.247532
EM: Round [97] log likelihood: -597299.246270
EM: Round [98] log likelihood: -597299.245052
EM: Round [99] log likelihood: -597299.243875
EM: Round [100] log likelihood: -597299.242737
EM: Round [101] log likelihood: -597299.241638
EM: Round [102] log likelihood: -597299.240576
EM: Round [103] log likelihood: -597299.239548
EM: Round [104] log likelihood: -597299.238555
EM: Round [105] log likelihood: -597299.237593
EM: Round [106] log likelihood: -597299.236663
EM: Round [107] log likelihood: -597299.235762
EM: Round [108] log likelihood: -597299.234891
EM: Round [109] log likelihood: -597299.234046
EM: Round [110] log likelihood: -597299.233229
EM: Round [111] log likelihood: -597299.232437
EM: Round [112] log likelihood: -597299.231669
EM: Round [113] log likelihood: -597299.230926
EM: Round [114] log likelihood: -597299.230205
EM: Round [115] log likelihood: -597299.229506
EM: Round [116] log likelihood: -597299.228829
EM: Round [117] log likelihood: -597299.228171
EM: Round [118] log likelihood: -597299.227534
EM: Round [119] log likelihood: -597299.226916
EM: Round [120] log likelihood: -597299.226316
EM: Round [121] log likelihood: -597299.225734
EM: Round [122] log likelihood: -597299.225168
EM: Round [123] log likelihood: -597299.224620
EM: Round [124] log likelihood: -597299.224087
EM: Round [125] log likelihood: -597299.223570
EM: Round [126] log likelihood: -597299.223068
EM: Round [127] log likelihood: -597299.222580
EM: Round [128] log likelihood: -597299.222107
EM: Round [129] log likelihood: -597299.221646
EM: Round [130] log likelihood: -597299.221199
EM: Round [131] log likelihood: -597299.220765
EM: Round [132] log likelihood: -597299.220342
EM: Round [133] log likelihood: -597299.219932
EM: Round [134] log likelihood: -597299.219533
EM: Round [135] log likelihood: -597299.219145
EM: Round [136] log likelihood: -597299.218768
EM: Round [137] log likelihood: -597299.218401
EM: Round [138] log likelihood: -597299.218044
EM: Round [139] log likelihood: -597299.217697
EM: Round [140] log likelihood: -597299.217360
EM: Round [141] log likelihood: -597299.217032
EM: Round [142] log likelihood: -597299.216712
EM: Round [143] log likelihood: -597299.216402
EM: Round [144] log likelihood: -597299.216099
EM: Round [145] log likelihood: -597299.215805
EM: Round [146] log likelihood: -597299.215519
EM: Round [147] log likelihood: -597299.215240
EM: Round [148] log likelihood: -597299.214969
EM: Round [149] log likelihood: -597299.214705
EM: Round [150] log likelihood: -597299.214448
EM: Round [151] log likelihood: -597299.214197
EM: Round [152] log likelihood: -597299.213954
EM: Round [153] log likelihood: -597299.213716
EM: Round [154] log likelihood: -597299.213485
EM: Round [155] log likelihood: -597299.213260
EM: Round [156] log likelihood: -597299.213041
EM: Round [157] log likelihood: -597299.212827
EM: Round [158] log likelihood: -597299.212619
EM: Round [159] log likelihood: -597299.212416
EM: Round [160] log likelihood: -597299.212219
EM: Round [161] log likelihood: -597299.212027
EM: Round [162] log likelihood: -597299.211839
EM: Round [163] log likelihood: -597299.211656
EM: Round [164] log likelihood: -597299.211478
EM: Round [165] log likelihood: -597299.211305
EM: Round [166] log likelihood: -597299.211135
EM: Round [167] log likelihood: -597299.210970
EM: Round [168] log likelihood: -597299.210810
EM: Round [169] log likelihood: -597299.210653
EM: Round [170] log likelihood: -597299.210500
EM: Round [171] log likelihood: -597299.210351
EM: Round [172] log likelihood: -597299.210206
EM: Round [173] log likelihood: -597299.210064
EM: Round [174] log likelihood: -597299.209926
EM: Round [175] log likelihood: -597299.209791
EM: Round [176] log likelihood: -597299.209660
EM: Round [177] log likelihood: -597299.209531
EM: Round [178] log likelihood: -597299.209406
EM: Round [179] log likelihood: -597299.209284
EM: Round [180] log likelihood: -597299.209165
EM: Round [181] log likelihood: -597299.209049
EM: Round [182] log likelihood: -597299.208936
EM: Round [183] log likelihood: -597299.208825
EM: Round [184] log likelihood: -597299.208717
EM: Round [185] log likelihood: -597299.208612
EM: Round [186] log likelihood: -597299.208509
EM: Round [187] log likelihood: -597299.208409
EM: Round [188] log likelihood: -597299.208311
EM: Stopping iterations at round 188 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.BGsP583Cu6/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.BGsP583Cu6/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.BGsP583Cu6/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 169818666 > /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.BGsP583Cu6/ctat_genome_lib_build_dir > /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.BGsP583Cu6/ctat_genome_lib_build_dir --annotate /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.BGsP583Cu6/ctat_genome_lib_build_dir
-done, see /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.BGsP583Cu6/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 3010, filtered: 11487)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.BGsP583Cu6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.BGsP583Cu6/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
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WARNING, no entry stored in dbm for [ENSG00000253320.7]
WARNING, no entry stored in dbm for [ENSG00000242615.1]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000204261.9]
WARNING, no entry stored in dbm for [ENSG00000257621.8]
WARNING, no entry stored in dbm for [ENSG00000254860.6]
WARNING, no entry stored in dbm for [ENSG00000282961.1]
WARNING, no entry stored in dbm for [ENSG00000232316.2]
WARNING, no entry stored in dbm for [ENSG00000203739.4]
WARNING, no entry stored in dbm for [ENSG00000245213.7]
WARNING, no entry stored in dbm for [ENSG00000196167.10]
WARNING, no entry stored in dbm for [ENSG00000228113.7]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000224477.5]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000230069.3]
WARNING, no entry stored in dbm for [ENSG00000233090.1]
WARNING, no entry stored in dbm for [ENSG00000198155.5]
WARNING, no entry stored in dbm for [ENSG00000234394.8]
WARNING, no entry stored in dbm for [ENSG00000100058.12]
WARNING, no entry stored in dbm for [ENSG00000197182.14]
WARNING, no entry stored in dbm for [ENSG00000255390.1]
WARNING, no entry stored in dbm for [ENSG00000255555.1]
WARNING, no entry stored in dbm for [ENSG00000247774.7]
WARNING, no entry stored in dbm for [ENSG00000247774.7]
WARNING, no entry stored in dbm for [ENSG00000266145.1]
WARNING, no entry stored in dbm for [ENSG00000267107.8]
WARNING, no entry stored in dbm for [ENSG00000261288.1]
WARNING, no entry stored in dbm for [ENSG00000261273.1]
WARNING, no entry stored in dbm for [ENSG00000274167.4]
WARNING, no entry stored in dbm for [ENSG00000259293.1]
WARNING, no entry stored in dbm for [ENSG00000259293.1]
WARNING, no entry stored in dbm for [ENSG00000183444.10]
WARNING, no entry stored in dbm for [ENSG00000168992.4]
WARNING, no entry stored in dbm for [ENSG00000238152.2]
WARNING, no entry stored in dbm for [ENSG00000284707.2]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000223482.8]
WARNING, no entry stored in dbm for [ENSG00000286540.1]
WARNING, no entry stored in dbm for [ENSG00000241472.7]
WARNING, no entry stored in dbm for [ENSG00000242294.6]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000235148.2]
WARNING, no entry stored in dbm for [ENSG00000255248.9]
WARNING, no entry stored in dbm for [ENSG00000106133.18]
WARNING, no entry stored in dbm for [ENSG00000237187.9]
WARNING, no entry stored in dbm for [ENSG00000279539.1]
WARNING, no entry stored in dbm for [ENSG00000251955.1]
WARNING, no entry stored in dbm for [ENSG00000201641.1]
WARNING, no entry stored in dbm for [ENSG00000250111.3]
WARNING, no entry stored in dbm for [ENSG00000231167.3]
WARNING, no entry stored in dbm for [ENSG00000234763.3]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000286218.2]
WARNING, no entry stored in dbm for [ENSG00000258240.6]
WARNING, no entry stored in dbm for [ENSG00000206337.12]
WARNING, no entry stored in dbm for [ENSG00000198496.12]
WARNING, no entry stored in dbm for [ENSG00000131401.11]
WARNING, no entry stored in dbm for [ENSG00000248477.6]
WARNING, no entry stored in dbm for [ENSG00000249917.3]
WARNING, no entry stored in dbm for [ENSG00000227632.2]
WARNING, no entry stored in dbm for [ENSG00000185485.14]
WARNING, no entry stored in dbm for [ENSG00000230131.6]
WARNING, no entry stored in dbm for [ENSG00000262619.2]
WARNING, no entry stored in dbm for [ENSG00000235531.11]
WARNING, no entry stored in dbm for [ENSG00000179899.8]
WARNING, no entry stored in dbm for [ENSG00000243406.6]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000234072.1]
WARNING, no entry stored in dbm for [ENSG00000228782.7]
WARNING, no entry stored in dbm for [ENSG00000235989.4]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000210077.1]
WARNING, no entry stored in dbm for [ENSG00000230323.6]
WARNING, no entry stored in dbm for [ENSG00000260083.2]
WARNING, no entry stored in dbm for [ENSG00000284195.1]
WARNING, no entry stored in dbm for [ENSG00000283805.1]
WARNING, no entry stored in dbm for [ENSG00000228526.7]
WARNING, no entry stored in dbm for [ENSG00000203709.12]
WARNING, no entry stored in dbm for [ENSG00000229989.4]
WARNING, no entry stored in dbm for [ENSG00000188599.17]
WARNING, no entry stored in dbm for [ENSG00000200291.1]
WARNING, no entry stored in dbm for [ENSG00000200332.1]
WARNING, no entry stored in dbm for [ENSG00000200494.1]
WARNING, no entry stored in dbm for [ENSG00000200419.1]
WARNING, no entry stored in dbm for [ENSG00000207142.1]
WARNING, no entry stored in dbm for [ENSG00000201955.1]
WARNING, no entry stored in dbm for [ENSG00000202354.1]
WARNING, no entry stored in dbm for [ENSG00000196312.15]
WARNING, no entry stored in dbm for [ENSG00000232063.2]
WARNING, no entry stored in dbm for [ENSG00000260198.1]
WARNING, no entry stored in dbm for [ENSG00000272701.3]
WARNING, no entry stored in dbm for [ENSG00000280200.1]
WARNING, no entry stored in dbm for [ENSG00000229619.4]
WARNING, no entry stored in dbm for [ENSG00000229619.4]
WARNING, no entry stored in dbm for [ENSG00000198358.4]
WARNING, no entry stored in dbm for [ENSG00000214548.18]
WARNING, no entry stored in dbm for [ENSG00000233830.2]
WARNING, no entry stored in dbm for [ENSG00000237603.1]
WARNING, no entry stored in dbm for [ENSG00000225689.2]
WARNING, no entry stored in dbm for [ENSG00000253320.7]
WARNING, no entry stored in dbm for [ENSG00000239545.3]
WARNING, no entry stored in dbm for [ENSG00000272142.4]
WARNING, no entry stored in dbm for [ENSG00000271978.1]
WARNING, no entry stored in dbm for [ENSG00000187172.15]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000270182.1]
WARNING, no entry stored in dbm for [ENSG00000214553.10]
WARNING, no entry stored in dbm for [ENSG00000255299.5]
WARNING, no entry stored in dbm for [ENSG00000229400.1]
WARNING, no entry stored in dbm for [ENSG00000257564.1]
WARNING, no entry stored in dbm for [ENSG00000267198.1]
WARNING, no entry stored in dbm for [ENSG00000231721.7]
WARNING, no entry stored in dbm for [ENSG00000197083.11]
WARNING, no entry stored in dbm for [ENSG00000273142.1]
WARNING, no entry stored in dbm for [ENSG00000268034.1]
WARNING, no entry stored in dbm for [ENSG00000232613.6]
WARNING, no entry stored in dbm for [ENSG00000258733.6]
WARNING, no entry stored in dbm for [ENSG00000258404.1]
WARNING, no entry stored in dbm for [ENSG00000260192.3]
WARNING, no entry stored in dbm for [ENSG00000261175.6]
WARNING, no entry stored in dbm for [ENSG00000257906.3]
WARNING, no entry stored in dbm for [ENSG00000238755.3]
WARNING, no entry stored in dbm for [ENSG00000241383.2]
WARNING, no entry stored in dbm for [ENSG00000234663.7]
WARNING, no entry stored in dbm for [ENSG00000223883.2]
WARNING, no entry stored in dbm for [ENSG00000279579.3]
WARNING, no entry stored in dbm for [ENSG00000279579.3]
WARNING, no entry stored in dbm for [ENSG00000261008.7]
WARNING, no entry stored in dbm for [ENSG00000198685.4]
WARNING, no entry stored in dbm for [ENSG00000225564.6]
WARNING, no entry stored in dbm for [ENSG00000237491.10]
WARNING, no entry stored in dbm for [ENSG00000215866.8]
WARNING, no entry stored in dbm for [ENSG00000215866.8]
WARNING, no entry stored in dbm for [ENSG00000224957.6]
WARNING, no entry stored in dbm for [ENSG00000272419.6]
WARNING, no entry stored in dbm for [ENSG00000274020.4]
WARNING, no entry stored in dbm for [ENSG00000228794.10]
WARNING, no entry stored in dbm for [ENSG00000163364.10]
WARNING, no entry stored in dbm for [ENSG00000249069.8]
WARNING, no entry stored in dbm for [ENSG00000182648.13]
WARNING, no entry stored in dbm for [ENSG00000235687.9]
WARNING, no entry stored in dbm for [ENSG00000235687.9]
WARNING, no entry stored in dbm for [ENSG00000241135.6]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000258279.4]
WARNING, no entry stored in dbm for [ENSG00000259831.1]
WARNING, no entry stored in dbm for [ENSG00000238121.6]
WARNING, no entry stored in dbm for [ENSG00000231674.1]
WARNING, no entry stored in dbm for [ENSG00000259527.2]
WARNING, no entry stored in dbm for [ENSG00000231721.7]
WARNING, no entry stored in dbm for [ENSG00000231721.7]
WARNING, no entry stored in dbm for [ENSG00000225370.1]
WARNING, no entry stored in dbm for [ENSG00000273118.1]
WARNING, no entry stored in dbm for [ENSG00000264707.1]
WARNING, no entry stored in dbm for [ENSG00000235513.2]
WARNING, no entry stored in dbm for [ENSG00000241416.1]
WARNING, no entry stored in dbm for [ENSG00000229222.1]
WARNING, no entry stored in dbm for [ENSG00000250834.1]
WARNING, no entry stored in dbm for [ENSG00000234380.2]
WARNING, no entry stored in dbm for [ENSG00000283959.1]
WARNING, no entry stored in dbm for [ENSG00000259948.2]
WARNING, no entry stored in dbm for [ENSG00000218510.8]
WARNING, no entry stored in dbm for [ENSG00000175773.13]
WARNING, no entry stored in dbm for [ENSG00000164385.9]
WARNING, no entry stored in dbm for [ENSG00000260776.6]
WARNING, no entry stored in dbm for [ENSG00000235257.9]
WARNING, no entry stored in dbm for [ENSG00000230590.11]
WARNING, no entry stored in dbm for [ENSG00000279179.1]
WARNING, no entry stored in dbm for [ENSG00000249096.7]
WARNING, no entry stored in dbm for [ENSG00000270760.1]
WARNING, no entry stored in dbm for [ENSG00000286675.1]
WARNING, no entry stored in dbm for [ENSG00000204650.14]
WARNING, no entry stored in dbm for [ENSG00000226066.1]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000275811.1]
WARNING, no entry stored in dbm for [ENSG00000233705.7]
WARNING, no entry stored in dbm for [ENSG00000205940.8]
WARNING, no entry stored in dbm for [ENSG00000231434.1]
WARNING, no entry stored in dbm for [ENSG00000244155.1]
WARNING, no entry stored in dbm for [ENSG00000232160.7]
WARNING, no entry stored in dbm for [ENSG00000267272.5]
WARNING, no entry stored in dbm for [ENSG00000253521.2]
WARNING, no entry stored in dbm for [ENSG00000184188.6]
WARNING, no entry stored in dbm for [ENSG00000231711.2]
WARNING, no entry stored in dbm for [ENSG00000206341.7]
WARNING, no entry stored in dbm for [ENSG00000287516.1]
WARNING, no entry stored in dbm for [ENSG00000255135.4]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000223409.1]
WARNING, no entry stored in dbm for [ENSG00000231074.9]
WARNING, no entry stored in dbm for [ENSG00000235454.1]
WARNING, no entry stored in dbm for [ENSG00000227344.2]
WARNING, no entry stored in dbm for [ENSG00000237125.11]
WARNING, no entry stored in dbm for [ENSG00000250708.2]
WARNING, no entry stored in dbm for [ENSG00000257287.1]
WARNING, no entry stored in dbm for [ENSG00000178458.5]
WARNING, no entry stored in dbm for [ENSG00000241549.8]
WARNING, no entry stored in dbm for [ENSG00000253816.3]
WARNING, no entry stored in dbm for [ENSG00000161912.18]
WARNING, no entry stored in dbm for [ENSG00000242808.10]
WARNING, no entry stored in dbm for [ENSG00000203489.3]
WARNING, no entry stored in dbm for [ENSG00000230596.3]
WARNING, no entry stored in dbm for [ENSG00000277741.4]
WARNING, no entry stored in dbm for [ENSG00000241621.1]
WARNING, no entry stored in dbm for [ENSG00000225889.9]
WARNING, no entry stored in dbm for [ENSG00000250903.9]
WARNING, no entry stored in dbm for [ENSG00000250959.2]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000240288.8]
WARNING, no entry stored in dbm for [ENSG00000278593.1]
WARNING, no entry stored in dbm for [ENSG00000244692.3]
WARNING, no entry stored in dbm for [ENSG00000239224.3]
WARNING, no entry stored in dbm for [ENSG00000243426.3]
WARNING, no entry stored in dbm for [ENSG00000242493.3]
WARNING, no entry stored in dbm for [ENSG00000243738.3]
WARNING, no entry stored in dbm for [ENSG00000214826.5]
WARNING, no entry stored in dbm for [ENSG00000237499.7]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000230590.11]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000228876.4]
WARNING, no entry stored in dbm for [ENSG00000202398.1]
WARNING, no entry stored in dbm for [ENSG00000247828.8]
WARNING, no entry stored in dbm for [ENSG00000242216.3]
WARNING, no entry stored in dbm for [ENSG00000286115.1]
WARNING, no entry stored in dbm for [ENSG00000247317.3]
WARNING, no entry stored in dbm for [ENSG00000265296.1]
WARNING, no entry stored in dbm for [ENSG00000241316.8]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000268442.1]
WARNING, no entry stored in dbm for [ENSG00000253540.5]
WARNING, no entry stored in dbm for [ENSG00000235618.8]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000257242.8]
WARNING, no entry stored in dbm for [ENSG00000234709.2]
WARNING, no entry stored in dbm for [ENSG00000224533.4]
WARNING, no entry stored in dbm for [ENSG00000203497.2]
WARNING, no entry stored in dbm for [ENSG00000206939.1]
WARNING, no entry stored in dbm for [ENSG00000200554.1]
WARNING, no entry stored in dbm for [ENSG00000258454.1]
WARNING, no entry stored in dbm for [ENSG00000229847.9]
WARNING, no entry stored in dbm for [ENSG00000264044.1]
WARNING, no entry stored in dbm for [ENSG00000180539.8]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000258739.1]
WARNING, no entry stored in dbm for [ENSG00000237945.7]
WARNING, no entry stored in dbm for [ENSG00000239748.3]
WARNING, no entry stored in dbm for [ENSG00000264618.2]
WARNING, no entry stored in dbm for [ENSG00000239211.3]
WARNING, no entry stored in dbm for [ENSG00000264582.2]
WARNING, no entry stored in dbm for [ENSG00000227914.3]
WARNING, no entry stored in dbm for [ENSG00000226472.8]
WARNING, no entry stored in dbm for [ENSG00000277654.6]
WARNING, no entry stored in dbm for [ENSG00000287722.1]
WARNING, no entry stored in dbm for [ENSG00000250473.1]
WARNING, no entry stored in dbm for [ENSG00000286830.1]
WARNING, no entry stored in dbm for [ENSG00000235062.4]
WARNING, no entry stored in dbm for [ENSG00000247400.4]
WARNING, no entry stored in dbm for [ENSG00000206774.1]
WARNING, no entry stored in dbm for [ENSG00000255092.1]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000260261.2]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000231607.13]
WARNING, no entry stored in dbm for [ENSG00000239617.1]
WARNING, no entry stored in dbm for [ENSG00000188660.4]
WARNING, no entry stored in dbm for [ENSG00000264569.1]
WARNING, no entry stored in dbm for [ENSG00000226950.8]
WARNING, no entry stored in dbm for [ENSG00000154198.14]
WARNING, no entry stored in dbm for [ENSG00000221216.1]
WARNING, no entry stored in dbm for [ENSG00000154198.14]
WARNING, no entry stored in dbm for [ENSG00000154198.14]
WARNING, no entry stored in dbm for [ENSG00000274450.1]
WARNING, no entry stored in dbm for [ENSG00000233622.3]
WARNING, no entry stored in dbm for [ENSG00000278013.1]
WARNING, no entry stored in dbm for [ENSG00000231609.7]
WARNING, no entry stored in dbm for [ENSG00000278903.3]
WARNING, no entry stored in dbm for [ENSG00000256674.1]
WARNING, no entry stored in dbm for [ENSG00000224188.1]
WARNING, no entry stored in dbm for [ENSG00000196312.15]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000261801.6]
WARNING, no entry stored in dbm for [ENSG00000228794.10]
WARNING, no entry stored in dbm for [ENSG00000245526.11]
WARNING, no entry stored in dbm for [ENSG00000283541.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000270760.1]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000232000.3]
WARNING, no entry stored in dbm for [ENSG00000205559.5]
WARNING, no entry stored in dbm for [ENSG00000243389.1]
WARNING, no entry stored in dbm for [ENSG00000232907.8]
WARNING, no entry stored in dbm for [ENSG00000215785.2]
WARNING, no entry stored in dbm for [ENSG00000226259.10]
WARNING, no entry stored in dbm for [ENSG00000287134.1]
WARNING, no entry stored in dbm for [ENSG00000284959.2]
WARNING, no entry stored in dbm for [ENSG00000250363.1]
WARNING, no entry stored in dbm for [ENSG00000246695.8]
WARNING, no entry stored in dbm for [ENSG00000286215.1]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000286277.1]
WARNING, no entry stored in dbm for [ENSG00000204387.14]
WARNING, no entry stored in dbm for [ENSG00000228409.6]
WARNING, no entry stored in dbm for [ENSG00000227113.2]
WARNING, no entry stored in dbm for [ENSG00000178458.5]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000257281.1]
WARNING, no entry stored in dbm for [ENSG00000267156.1]
WARNING, no entry stored in dbm for [ENSG00000248538.8]
WARNING, no entry stored in dbm for [ENSG00000272168.8]
WARNING, no entry stored in dbm for [ENSG00000228775.8]
WARNING, no entry stored in dbm for [ENSG00000260276.2]
WARNING, no entry stored in dbm for [ENSG00000204352.4]
WARNING, no entry stored in dbm for [ENSG00000235687.9]
WARNING, no entry stored in dbm for [ENSG00000288596.2]
WARNING, no entry stored in dbm for [ENSG00000203711.14]
WARNING, no entry stored in dbm for [ENSG00000234925.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000280424.1]
WARNING, no entry stored in dbm for [ENSG00000216657.1]
WARNING, no entry stored in dbm for [ENSG00000231424.3]
WARNING, no entry stored in dbm for [ENSG00000203414.2]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000251079.6]
WARNING, no entry stored in dbm for [ENSG00000215580.11]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000226548.1]
WARNING, no entry stored in dbm for [ENSG00000286983.1]
WARNING, no entry stored in dbm for [ENSG00000227883.1]
WARNING, no entry stored in dbm for [ENSG00000263069.6]
WARNING, no entry stored in dbm for [ENSG00000197595.4]
WARNING, no entry stored in dbm for [ENSG00000220517.2]
WARNING, no entry stored in dbm for [ENSG00000227948.4]
WARNING, no entry stored in dbm for [ENSG00000244681.1]
WARNING, no entry stored in dbm for [ENSG00000244723.3]
WARNING, no entry stored in dbm for [ENSG00000272578.5]
WARNING, no entry stored in dbm for [ENSG00000256745.1]
WARNING, no entry stored in dbm for [ENSG00000286942.1]
WARNING, no entry stored in dbm for [ENSG00000254404.1]
WARNING, no entry stored in dbm for [ENSG00000250447.6]
WARNING, no entry stored in dbm for [ENSG00000244198.7]
WARNING, no entry stored in dbm for [ENSG00000198685.4]
WARNING, no entry stored in dbm for [ENSG00000285803.1]
WARNING, no entry stored in dbm for [ENSG00000278376.1]
WARNING, no entry stored in dbm for [ENSG00000254987.1]
WARNING, no entry stored in dbm for [ENSG00000224413.1]
WARNING, no entry stored in dbm for [ENSG00000266456.1]
WARNING, no entry stored in dbm for [ENSG00000270139.1]
WARNING, no entry stored in dbm for [ENSG00000272578.5]
WARNING, no entry stored in dbm for [ENSG00000272578.5]
WARNING, no entry stored in dbm for [ENSG00000255291.2]
WARNING, no entry stored in dbm for [ENSG00000254902.1]
WARNING, no entry stored in dbm for [ENSG00000244197.3]
WARNING, no entry stored in dbm for [ENSG00000254902.1]
WARNING, no entry stored in dbm for [ENSG00000255234.6]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000237636.3]
WARNING, no entry stored in dbm for [ENSG00000254271.1]
WARNING, no entry stored in dbm for [ENSG00000233673.7]
WARNING, no entry stored in dbm for [ENSG00000225889.9]
WARNING, no entry stored in dbm for [ENSG00000215067.10]
WARNING, no entry stored in dbm for [ENSG00000287338.1]
WARNING, no entry stored in dbm for [ENSG00000273192.1]
WARNING, no entry stored in dbm for [ENSG00000286198.1]
WARNING, no entry stored in dbm for [ENSG00000238287.1]
WARNING, no entry stored in dbm for [ENSG00000234108.1]
WARNING, no entry stored in dbm for [ENSG00000229588.2]
WARNING, no entry stored in dbm for [ENSG00000270780.1]
WARNING, no entry stored in dbm for [ENSG00000234589.4]
WARNING, no entry stored in dbm for [ENSG00000284999.1]
WARNING, no entry stored in dbm for [ENSG00000224848.2]
WARNING, no entry stored in dbm for [ENSG00000287368.1]
WARNING, no entry stored in dbm for [ENSG00000233461.6]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000224934.5]
WARNING, no entry stored in dbm for [ENSG00000273481.1]
WARNING, no entry stored in dbm for [ENSG00000180764.13]
WARNING, no entry stored in dbm for [ENSG00000232499.2]
WARNING, no entry stored in dbm for [ENSG00000285700.1]
WARNING, no entry stored in dbm for [ENSG00000227619.3]
WARNING, no entry stored in dbm for [ENSG00000285280.2]
WARNING, no entry stored in dbm for [ENSG00000234062.8]
WARNING, no entry stored in dbm for [ENSG00000234062.8]
WARNING, no entry stored in dbm for [ENSG00000235582.2]
WARNING, no entry stored in dbm for [ENSG00000280285.1]
WARNING, no entry stored in dbm for [ENSG00000284882.1]
WARNING, no entry stored in dbm for [ENSG00000256625.1]
WARNING, no entry stored in dbm for [ENSG00000286109.1]
WARNING, no entry stored in dbm for [ENSG00000285534.1]
WARNING, no entry stored in dbm for [ENSG00000288583.1]
WARNING, no entry stored in dbm for [ENSG00000287368.1]
WARNING, no entry stored in dbm for [ENSG00000228830.1]
WARNING, no entry stored in dbm for [ENSG00000261060.1]
WARNING, no entry stored in dbm for [ENSG00000204055.5]
WARNING, no entry stored in dbm for [ENSG00000224402.2]
WARNING, no entry stored in dbm for [ENSG00000232702.3]
WARNING, no entry stored in dbm for [ENSG00000258407.1]
WARNING, no entry stored in dbm for [ENSG00000238086.5]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000237845.1]
WARNING, no entry stored in dbm for [ENSG00000273149.1]
WARNING, no entry stored in dbm for [ENSG00000283283.2]
WARNING, no entry stored in dbm for [ENSG00000287347.1]
WARNING, no entry stored in dbm for [ENSG00000244733.5]
WARNING, no entry stored in dbm for [ENSG00000225806.8]
WARNING, no entry stored in dbm for [ENSG00000287569.1]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000279833.1]
WARNING, no entry stored in dbm for [ENSG00000260425.1]
WARNING, no entry stored in dbm for [ENSG00000217514.1]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000282740.1]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000150175.13]
WARNING, no entry stored in dbm for [ENSG00000225783.8]
WARNING, no entry stored in dbm for [ENSG00000237609.1]
WARNING, no entry stored in dbm for [ENSG00000272734.1]
WARNING, no entry stored in dbm for [ENSG00000223509.8]
WARNING, no entry stored in dbm for [ENSG00000218052.5]
WARNING, no entry stored in dbm for [ENSG00000199878.1]
WARNING, no entry stored in dbm for [ENSG00000237017.1]
WARNING, no entry stored in dbm for [ENSG00000276216.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000274019.1]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000263585.1]
WARNING, no entry stored in dbm for [ENSG00000254701.3]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000250999.2]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000280248.1]
WARNING, no entry stored in dbm for [ENSG00000284675.1]
WARNING, no entry stored in dbm for [ENSG00000228043.5]
WARNING, no entry stored in dbm for [ENSG00000274425.1]
WARNING, no entry stored in dbm for [ENSG00000222386.1]
WARNING, no entry stored in dbm for [ENSG00000274425.1]
WARNING, no entry stored in dbm for [ENSG00000200131.1]
WARNING, no entry stored in dbm for [ENSG00000274425.1]
WARNING, no entry stored in dbm for [ENSG00000201010.1]
WARNING, no entry stored in dbm for [ENSG00000274425.1]
WARNING, no entry stored in dbm for [ENSG00000222068.1]
WARNING, no entry stored in dbm for [ENSG00000249244.1]
WARNING, no entry stored in dbm for [ENSG00000250111.3]
WARNING, no entry stored in dbm for [ENSG00000233098.9]
WARNING, no entry stored in dbm for [ENSG00000170089.15]
WARNING, no entry stored in dbm for [ENSG00000223991.1]
WARNING, no entry stored in dbm for [ENSG00000225475.1]
WARNING, no entry stored in dbm for [ENSG00000260236.1]
WARNING, no entry stored in dbm for [ENSG00000227745.1]
WARNING, no entry stored in dbm for [ENSG00000277855.1]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000284648.1]
WARNING, no entry stored in dbm for [ENSG00000242759.8]
WARNING, no entry stored in dbm for [ENSG00000261538.1]
WARNING, no entry stored in dbm for [ENSG00000228999.4]
WARNING, no entry stored in dbm for [ENSG00000287141.1]
WARNING, no entry stored in dbm for [ENSG00000243176.6]
WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [ENSG00000276538.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000268362.6]
WARNING, no entry stored in dbm for [ENSG00000270124.1]
WARNING, no entry stored in dbm for [ENSG00000261602.1]
WARNING, no entry stored in dbm for [ENSG00000288633.1]
WARNING, no entry stored in dbm for [ENSG00000248464.1]
WARNING, no entry stored in dbm for [ENSG00000288633.1]
WARNING, no entry stored in dbm for [ENSG00000254844.4]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000247728.2]
WARNING, no entry stored in dbm for [ENSG00000265936.1]
WARNING, no entry stored in dbm for [ENSG00000214259.3]
WARNING, no entry stored in dbm for [ENSG00000266379.6]
WARNING, no entry stored in dbm for [ENSG00000267023.5]
WARNING, no entry stored in dbm for [ENSG00000260392.6]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000250869.2]
WARNING, no entry stored in dbm for [ENSG00000275834.1]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000244260.2]
WARNING, no entry stored in dbm for [ENSG00000286234.1]
WARNING, no entry stored in dbm for [ENSG00000284627.1]
WARNING, no entry stored in dbm for [ENSG00000213985.4]
WARNING, no entry stored in dbm for [ENSG00000258215.1]
WARNING, no entry stored in dbm for [ENSG00000234072.1]
WARNING, no entry stored in dbm for [ENSG00000288663.1]
WARNING, no entry stored in dbm for [ENSG00000250938.6]
WARNING, no entry stored in dbm for [ENSG00000223812.8]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000248618.1]
WARNING, no entry stored in dbm for [ENSG00000228862.4]
WARNING, no entry stored in dbm for [ENSG00000254859.1]
WARNING, no entry stored in dbm for [ENSG00000254398.1]
WARNING, no entry stored in dbm for [ENSG00000254398.1]
WARNING, no entry stored in dbm for [ENSG00000217801.10]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000254951.7]
WARNING, no entry stored in dbm for [ENSG00000240535.8]
WARNING, no entry stored in dbm for [ENSG00000185684.15]
WARNING, no entry stored in dbm for [ENSG00000267040.6]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000248569.1]
WARNING, no entry stored in dbm for [ENSG00000248569.1]
WARNING, no entry stored in dbm for [ENSG00000258732.1]
WARNING, no entry stored in dbm for [ENSG00000255621.1]
WARNING, no entry stored in dbm for [ENSG00000285600.1]
WARNING, no entry stored in dbm for [ENSG00000253967.1]
WARNING, no entry stored in dbm for [ENSG00000279689.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000263843.1]
WARNING, no entry stored in dbm for [ENSG00000272267.2]
WARNING, no entry stored in dbm for [ENSG00000273361.1]
WARNING, no entry stored in dbm for [ENSG00000279649.1]
WARNING, no entry stored in dbm for [ENSG00000240418.1]
WARNING, no entry stored in dbm for [ENSG00000234584.1]
WARNING, no entry stored in dbm for [ENSG00000285106.2]
WARNING, no entry stored in dbm for [ENSG00000259495.3]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000279036.1]
WARNING, no entry stored in dbm for [ENSG00000225493.1]
WARNING, no entry stored in dbm for [ENSG00000234773.7]
WARNING, no entry stored in dbm for [ENSG00000267576.1]
WARNING, no entry stored in dbm for [ENSG00000262732.1]
WARNING, no entry stored in dbm for [ENSG00000259972.3]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000284671.1]
WARNING, no entry stored in dbm for [ENSG00000287263.1]
WARNING, no entry stored in dbm for [ENSG00000279529.1]
WARNING, no entry stored in dbm for [ENSG00000272369.1]
WARNING, no entry stored in dbm for [ENSG00000255655.1]
WARNING, no entry stored in dbm for [ENSG00000204929.13]
WARNING, no entry stored in dbm for [ENSG00000267575.7]
WARNING, no entry stored in dbm for [ENSG00000228509.6]
WARNING, no entry stored in dbm for [ENSG00000213970.4]
WARNING, no entry stored in dbm for [ENSG00000226824.7]
WARNING, no entry stored in dbm for [ENSG00000267449.1]
WARNING, no entry stored in dbm for [ENSG00000230825.2]
WARNING, no entry stored in dbm for [ENSG00000267623.3]
WARNING, no entry stored in dbm for [ENSG00000272736.5]
WARNING, no entry stored in dbm for [ENSG00000214970.8]
WARNING, no entry stored in dbm for [ENSG00000268723.1]
WARNING, no entry stored in dbm for [ENSG00000249419.1]
WARNING, no entry stored in dbm for [ENSG00000228829.1]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205578.6]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000243554.1]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000255367.3]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000284707.2]
WARNING, no entry stored in dbm for [ENSG00000261312.1]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [ENSG00000261556.10]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [ENSG00000283544.1]
WARNING, no entry stored in dbm for [ENSG00000279022.1]


	* STAR-Fusion complete.  See output: /tmp/nxf.BGsP583Cu6/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)