File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/71/e72ffca9656db318549bdb5b46b62a/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 09:57:22
                             Started mapping on |	Jun 08 10:03:54
                                    Finished on |	Jun 08 10:57:27
       Mapping speed, Million of reads per hour |	332.01

                          Number of input reads |	296318651
                      Average input read length |	267
                                    UNIQUE READS:
                   Uniquely mapped reads number |	284114490
                        Uniquely mapped reads % |	95.88%
                          Average mapped length |	267.00
                       Number of splices: Total |	346738840
            Number of splices: Annotated (sjdb) |	342586304
                       Number of splices: GT/AG |	343041940
                       Number of splices: GC/AG |	2554837
                       Number of splices: AT/AC |	334413
               Number of splices: Non-canonical |	807650
                      Mismatch rate per base, % |	0.17%
                         Deletion rate per base |	0.01%
                        Deletion average length |	1.71
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.82
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	9489027
             % of reads mapped to multiple loci |	3.20%
        Number of reads mapped to too many loci |	239855
             % of reads mapped to too many loci |	0.08%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2082094
                 % of reads unmapped: too short |	0.70%
                Number of reads unmapped: other |	393185
                     % of reads unmapped: other |	0.13%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%