AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 716
Pass (FILTER=PASS): 123 (17.2%)
Fail (FILTER=FAIL): 593 (82.8%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 144
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 119
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 55
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 47
confidence_below_min(low<high): 36
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 23
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 23
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 22
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 22
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 18
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 16
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 13
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 8
Breakdown by confidence:
high: 123 pass, 10 fail (total: 133)
low: 0 pass, 264 fail (total: 264)
medium: 0 pass, 319 fail (total: 319)
Arriba filter: 716 rows -> 123 PASS; wrote aih-tih-sc-714733-R1_A23YTGFLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-714733-R1_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-714733-R1_A23YTGFLT4_1.arriba.fusions.filter_summary.txt