File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/22/402cadb2ca4afbeb4d0d4f6832a88a/.command.log
Size
1.1 KB
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ac/44b0293800f2b37b88abad9ebe76bb/aih-tih-sc-318819-R1_A23YTGFLT4_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/63/a02649a3195a9a44d91c13f5ade17a/aih-tih-sc-318819-R1_A23YTGFLT4_1.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/22/402cadb2ca4afbeb4d0d4f6832a88a/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/22/402cadb2ca4afbeb4d0d4f6832a88a/.command.run
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: aih-tih-sc-318819-R1_A23YTGFLT4_1/abundance.h5
Successfully converted aih-tih-sc-318819-R1_A23YTGFLT4_1/abundance.h5 to aih-tih-sc-318819-R1_A23YTGFLT4_1_kallisto_mqc.tsv
  Sample: aih-tih-sc-318819-R1_A23YTGFLT4_1
  Mean Fragment Length: 109.6 bp
  Median Fragment Length: 104.0 bp
  pct_mito_est_counts: 0.056%
  pct_ribo_est_counts: 0.951%
  pct_hk_est_counts: 0.473%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.117%
  pct_ribo_tpm: 2.817%
  pct_hk_tpm: 0.713%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.024%