AIH curated blacklist: matched 13 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 233
Pass (FILTER=PASS): 49 (21.0%)
Fail (FILTER=FAIL): 184 (79.0%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 13
All 13 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 71
confidence_below_min(low<high): 23
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 15
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 7
confidence_below_min(medium<high);aih_curated_blacklist: 6
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 3
total_reads_below_min(6.0<8.0);aih_curated_blacklist: 2
total_reads_below_min(5.0<8.0): 2
Breakdown by confidence:
high: 49 pass, 7 fail (total: 56)
low: 0 pass, 74 fail (total: 74)
medium: 0 pass, 103 fail (total: 103)
Arriba filter: 233 rows -> 49 PASS; wrote aih-tih-sc-7f9674-R1_A23YTGFLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-7f9674-R1_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-7f9674-R1_A23YTGFLT4_1.arriba.fusions.filter_summary.txt