File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c2/81fe36c6a5dd6bc2cb96de477fa890/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:21:16
                             Started mapping on |	Jun 08 10:28:19
                                    Finished on |	Jun 08 11:27:13
       Mapping speed, Million of reads per hour |	301.23

                          Number of input reads |	295708708
                      Average input read length |	234
                                    UNIQUE READS:
                   Uniquely mapped reads number |	283412328
                        Uniquely mapped reads % |	95.84%
                          Average mapped length |	234.22
                       Number of splices: Total |	260070885
            Number of splices: Annotated (sjdb) |	254744743
                       Number of splices: GT/AG |	256962941
                       Number of splices: GC/AG |	1769665
                       Number of splices: AT/AC |	204708
               Number of splices: Non-canonical |	1133571
                      Mismatch rate per base, % |	0.25%
                         Deletion rate per base |	0.03%
                        Deletion average length |	1.90
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.60
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	8863197
             % of reads mapped to multiple loci |	3.00%
        Number of reads mapped to too many loci |	660890
             % of reads mapped to too many loci |	0.22%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2317641
                 % of reads unmapped: too short |	0.78%
                Number of reads unmapped: other |	454652
                     % of reads unmapped: other |	0.15%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%