Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f2/eaa00e023039f3de7b915a89d7c25d/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/17/fbe0add575f7d7c7279d220fb9e902/aih-tih-sc-67e6e5-R1_A23YTGFLT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f2/eaa00e023039f3de7b915a89d7c25d/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory