AIH curated blacklist: matched 9 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 221
Pass (FILTER=PASS): 21 (9.5%)
Fail (FILTER=FAIL): 200 (90.5%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 9
All 9 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 39
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 23
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 22
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 19
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 18
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 17
confidence_below_min(low<high): 14
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 14
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 3
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(3.0<8.0);aih_curated_blacklist: 2
Breakdown by confidence:
high: 21 pass, 4 fail (total: 25)
low: 0 pass, 96 fail (total: 96)
medium: 0 pass, 100 fail (total: 100)
Arriba filter: 221 rows -> 21 PASS; wrote aih-tih-sc-c400f1-R1_A23YTGFLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-c400f1-R1_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-c400f1-R1_A23YTGFLT4_1.arriba.fusions.filter_summary.txt