File Info
- Filename
- aih-tih-sc-da06ce-R1_A23YTGFLT4_1.fusions.csv
- Full Path
- s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/06/40702d2b683ea6797e44ec1fb3dc13/aih-tih-sc-da06ce-R1_A23YTGFLT4_1.fusions.csv
- Size
- 2.7 KB
- Task
- NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (aih-tih-sc-da06ce-R1_A23YTGFLT4_1)
- Attempt
Content
View in new tab| Fusion | Databases | Score | Explained score | arriba | starfusion |
| TLK2P1--AC110079.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:34039043:-#chr4:118595912:+,junction_reads: 22,spanning_reads: 0,ffmp: 0.0693 | ||
| TLK2--AC240565.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:62560126:+#chr17:106864:-,junction_reads: 12,spanning_reads: 0,ffmp: 0.0095 | ||
| PRSS27--TPSB2 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr16:2713529:-#chr16:1228814:-,junction_reads: 8,spanning_reads: 0,ffmp: 0.0253 | |
| TVP23C--CDRT4 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr17:15503098#chr17:15440285,reading-frame: stop-codon,type: deletion/read-through,split_reads1: 44,split_reads2: 36,discordant_mates: 1,coverage1: 985,coverage2: 387,confidence: high | |
| CCAR2--AC055854.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr8:22608065#chr8:22744594,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 47,split_reads2: 24,discordant_mates: 0,coverage1: 6487,coverage2: 391,confidence: high | ||
| PAPOLA--RBMXP1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr14:96502600#chr6:48539200,reading-frame: out-of-frame,type: translocation,split_reads1: 7,split_reads2: 41,discordant_mates: 0,coverage1: 4013,coverage2: 94,confidence: high | ||
| PAPOLA--FO393412.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr14:96502600#chr6:48539200,reading-frame: out-of-frame,type: translocation,split_reads1: 7,split_reads2: 41,discordant_mates: 0,coverage1: 4013,coverage2: 94,confidence: high | ||
| AC092807.3--DDAH1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr1:85496166#chr1:85358847,reading-frame: .,type: deletion/read-through,split_reads1: 13,split_reads2: 6,discordant_mates: 2,coverage1: 53,coverage2: 289,confidence: high | ||
| PCDHA10--PCDHAC1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140858436#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 9,split_reads2: 11,discordant_mates: 0,coverage1: 304,coverage2: 633,confidence: high | ||
| PCDHA10--PCDHAC2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140858436#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 9,split_reads2: 11,discordant_mates: 0,coverage1: 304,coverage2: 633,confidence: high | ||
| PCDHA10--PCDHA13 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140858436#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 9,split_reads2: 11,discordant_mates: 0,coverage1: 304,coverage2: 633,confidence: high | ||
| STON1--GTF2A1L | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr2:48582563#chr2:48621167,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 7,split_reads2: 10,discordant_mates: 0,coverage1: 461,coverage2: 217,confidence: high |
13 rows