2026-06-08T06:20:17Z thread 424 Sample sheet being processed by common lib? Yes
2026-06-08T06:20:17Z thread 424 SampleSheet Settings:
2026-06-08T06:20:17Z thread 424 FastqCompressionFormat = gzip
2026-06-08T06:20:17Z thread 424 NoLaneSplitting = FALSE
2026-06-08T06:20:17Z thread 424 OverrideCycles = Y151;I10;I10;Y151
2026-06-08T06:20:17Z thread 424 SoftwareVersion = 4.3.6
2026-06-08T06:20:17Z thread 424
2026-06-08T06:20:17Z thread 424 Index Read 2 (i5): The barcode and UMI outputs will be processed and output in Reverse Complement of Sample Sheet inputs. OverrideCycles bases for this read will be interpreted in reverse.
2026-06-08T06:20:17Z thread 424 shared-thread-linux-native-asio output is disabled
2026-06-08T06:20:17Z thread 424 bcl-convert Version 4.4.6
2026-06-08T06:20:17Z thread 424 Copyright (c) 2014-2025 Illumina, Inc.
2026-06-08T06:20:17Z thread 424 Command Line: --tiles s_6 --output-directory output --bcl-input-directory rundir --sample-sheet rundir/SampleSheet.csv
2026-06-08T06:20:17Z thread 424 Conversion Begins.
2026-06-08T06:20:17Z thread 424 Input BCL Information:
2026-06-08T06:20:17Z thread 424 Read Structure: 2026-06-08T06:20:17Z thread 424 Y1512026-06-08T06:20:17Z thread 424 ;2026-06-08T06:20:17Z thread 424 I102026-06-08T06:20:17Z thread 424 ;2026-06-08T06:20:17Z thread 424 I102026-06-08T06:20:17Z thread 424 ;2026-06-08T06:20:17Z thread 424 Y1512026-06-08T06:20:17Z thread 424
2026-06-08T06:20:17Z thread 424 RunInfo.xml file lists: 8 lanes, 6272 tiles
2026-06-08T06:20:17Z thread 424 BCL file format: cbcl
2026-06-08T06:20:17Z thread 424 Positions file format: slocs
2026-06-08T06:20:17Z thread 424 Filter file format: filter
2026-06-08T06:20:17Z thread 424 Conversion Information:
2026-06-08T06:20:17Z thread 424 Tile filtering: converting 784/6272 tiles
2026-06-08T06:20:17Z thread 424 Sample Count for Lane 1: 96
2026-06-08T06:20:17Z thread 424 Lane 1 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-08T06:20:17Z thread 424 Sample Count for Lane 2: 96
2026-06-08T06:20:17Z thread 424 Lane 2 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-08T06:20:17Z thread 424 Sample Count for Lane 3: 96
2026-06-08T06:20:17Z thread 424 Lane 3 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-08T06:20:17Z thread 424 Sample Count for Lane 4: 96
2026-06-08T06:20:17Z thread 424 Lane 4 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-08T06:20:17Z thread 424 Sample Count for Lane 5: 96
2026-06-08T06:20:18Z thread 424 Lane 5 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-08T06:20:18Z thread 424 Sample Count for Lane 6: 96
2026-06-08T06:20:18Z thread 424 Sample Count for Lane 7: 96
2026-06-08T06:20:18Z thread 424 Lane 7 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-08T06:20:18Z thread 424 Sample Count for Lane 8: 96
2026-06-08T06:20:18Z thread 424 Lane 8 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-08T06:20:18Z thread 424 Expected number of sample FASTQ files to be created: 192
2026-06-08T06:20:18Z thread 424 # CPU hw threads available: 64
2026-06-08T06:20:18Z thread 424 Parallel Tiles: 4. Threads Per Tile: 16
2026-06-08T06:20:18Z thread 424 SW compressors: 64
2026-06-08T06:20:18Z thread 424 SW decompressors: 32
2026-06-08T06:20:18Z thread 424 SW FASTQ compression level: 1
2026-06-08T06:51:46Z thread 424 Lane 6 Post-run Information:
2026-06-08T06:51:46Z thread 424 Total clusters: 3951964639
2026-06-08T06:51:46Z thread 424 Total Genomic Reads: 7903929278
2026-06-08T06:51:46Z thread 424 Total Genomic Input Gigabases 1193.49
2026-06-08T06:51:46Z thread 424 Minimum reads for a sample: 22866
2026-06-08T06:51:46Z thread 424 Maximum reads for a sample: 143968684
2026-06-08T06:51:46Z thread 424 Average reads per sample: 76260543.88
2026-06-08T06:51:46Z thread 424 Undetermined reads: 582917066
2026-06-08T06:51:47Z thread 424 Conversion Complete.