[W::hts_idx_load3] The index file is older than the data file: aih-tih-sc-0754d2-R1_A23YTGFLT4_1.Aligned.sortedByCoord.out.bam.bai Reading reference bed file: ref_annot.bed ... Done Load BAM file ... Done =================================================================== Total splicing Events: 18005294 Known Splicing Events: 17754047 Partial Novel Splicing Events: 142330 Novel Splicing Events: 97554 Filtered Splicing Events: 11363 Total splicing Junctions: 154190 Known Splicing Junctions: 136772 Partial Novel Splicing Junctions: 11432 Novel Splicing Junctions: 5986 =================================================================== Create BED file ... Create Interact file ...