Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/60/bfa35ac3f6efbb45e773b8eb3bef80/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/81/b8ae1e022d0f1801c610ffdae5c4a8/aih-tih-sc-01c779-R1_A23YTGFLT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/60/bfa35ac3f6efbb45e773b8eb3bef80/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory