Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/85/b0941cb3dd8772e5feff8c89eaaaaa/aih-tih-sc-e1cae1-R1_A23YTGFLT4_1_1.fastp.fastq.gz Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/85/b0941cb3dd8772e5feff8c89eaaaaa/aih-tih-sc-e1cae1-R1_A23YTGFLT4_1_2.fastp.fastq.gz Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c8/6fbf9d305c15bcccec495fa1104349/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c8/6fbf9d305c15bcccec495fa1104349/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/46/a263104e2c6c4c6c0447178748f21e/aih-tih-sc-e1cae1-R1_A23YTGFLT4_1.Chimeric.out.junction ==> STAGING COMPLETE (6 inputs) -ctat genome lib [/tmp/nxf.94ibH9L1T6/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.94ibH9L1T6/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary -sample contains 175278499 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.94ibH9L1T6/ctat_genome_lib_build_dir -J /tmp/nxf.94ibH9L1T6/aih-tih-sc-e1cae1-R1_A23YTGFLT4_1.Chimeric.out.junction -O /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.94ibH9L1T6/aih-tih-sc-e1cae1-R1_A23YTGFLT4_1.Chimeric.out.junction -building interval tree based on /tmp/nxf.94ibH9L1T6/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=120000.00/min [20000], rate=109090.91/min [30000], rate=112500.00/min [40000], rate=120000.00/min [50000], rate=100000.00/min [60000], rate=81818.18/min [70000], rate=79245.28/min [80000], rate=76190.48/min [90000], rate=73972.60/min [100000], rate=73170.73/min [110000], rate=71739.13/min [120000], rate=71287.13/min [130000], rate=71559.63/min [140000], rate=72413.79/min [150000], rate=73170.73/min [160000], rate=74418.60/min [170000], rate=75000.00/min [180000], rate=75524.48/min [190000], rate=75000.00/min [200000], rate=73170.73/min [210000], rate=72000.00/min [220000], rate=70588.24/min [230000], rate=70050.76/min [240000], rate=69230.77/min [250000], rate=69124.42/min [260000], rate=68722.47/min [270000], rate=68354.43/min [280000], rate=68292.68/min [290000], rate=68235.29/min [300000], rate=68181.82/min [310000], rate=68382.35/min [320000], rate=69064.75/min [330000], rate=69718.31/min [340000], rate=70103.09/min [350000], rate=70707.07/min [360000], rate=71523.18/min [370000], rate=72077.92/min [380000], rate=72611.46/min [390000], rate=73354.23/min [400000], rate=74074.07/min [410000], rate=74772.04/min [420000], rate=75449.10/min [430000], rate=76106.19/min [440000], rate=75213.68/min [450000], rate=74585.64/min [460000], rate=73994.64/min [470000], rate=73437.50/min [480000], rate=73282.44/min [490000], rate=72772.28/min [500000], rate=72463.77/min [510000], rate=72000.00/min [520000], rate=71395.88/min [530000], rate=71460.67/min [540000], rate=71208.79/min [550000], rate=70815.45/min [560000], rate=70588.24/min [570000], rate=70515.46/min [580000], rate=70445.34/min [590000], rate=70377.73/min [600000], rate=70450.10/min [610000], rate=70520.23/min [620000], rate=70857.14/min [630000], rate=71052.63/min [640000], rate=71641.79/min [650000], rate=71955.72/min [660000], rate=72262.77/min [670000], rate=72563.18/min [680000], rate=72987.48/min [690000], rate=73404.26/min [700000], rate=73684.21/min [710000], rate=73195.88/min [720000], rate=72727.27/min [730000], rate=72158.15/min [740000], rate=71728.59/min [750000], rate=71428.57/min [760000], rate=71250.00/min [770000], rate=71076.92/min [780000], rate=70801.82/min [790000], rate=70640.83/min [800000], rate=70381.23/min [810000], rate=69827.59/min [820000], rate=69295.77/min [830000], rate=68975.07/min [840000], rate=68664.85/min [850000], rate=68090.79/min [860000], rate=67716.54/min [870000], rate=67616.58/min [880000], rate=67692.31/min [890000], rate=67766.50/min [900000], rate=67924.53/min [910000], rate=67910.45/min [920000], rate=67813.27/min [930000], rate=67800.73/min [940000], rate=67707.08/min [950000], rate=67776.46/min [960000], rate=68004.72/min [970000], rate=68309.86/min [980000], rate=68531.47/min [990000], rate=68750.00/min [1000000], rate=68728.52/min [1010000], rate=68243.24/min [1020000], rate=67624.31/min [1030000], rate=66309.01/min [1040000], rate=65408.81/min [1050000], rate=64881.57/min [1060000], rate=64634.15/min [1070000], rate=64522.61/min [1080000], rate=64349.55/min [1090000], rate=64306.78/min [1100000], rate=64327.49/min [1110000], rate=64347.83/min [1120000], rate=64367.82/min [1130000], rate=64509.99/min [1140000], rate=64711.45/min [1150000], rate=64849.62/min [1160000], rate=64925.37/min [1170000], rate=64522.06/min [1180000], rate=64188.58/min [1190000], rate=63806.97/min [1200000], rate=63492.06/min [1210000], rate=63240.42/min [1220000], rate=63049.10/min [1230000], rate=62862.01/min [1240000], rate=62731.87/min [1250000], rate=62709.03/min [1260000], rate=62686.57/min [1270000], rate=62561.58/min [1280000], rate=62591.69/min [1290000], rate=62621.36/min [1300000], rate=62700.96/min [1310000], rate=62980.77/min [1320000], rate=63258.79/min [1330000], rate=63383.64/min [1340000], rate=63456.99/min [1350000], rate=63529.41/min [1360000], rate=63501.95/min [1370000], rate=63279.45/min [1380000], rate=63109.76/min [1390000], rate=62990.94/min [1400000], rate=63063.06/min [1410000], rate=62993.30/min [1420000], rate=62924.67/min [1430000], rate=62903.23/min [1440000], rate=62882.10/min [1450000], rate=62952.24/min [1460000], rate=62931.03/min [1470000], rate=62955.03/min [1480000], rate=63068.18/min [1490000], rate=63135.59/min [1500000], rate=63335.68/min [1510000], rate=63400.98/min [1520000], rate=63465.55/min [1530000], rate=63573.41/min -building interval tree based on /tmp/nxf.94ibH9L1T6/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=33333.33/min [20000], rate=32432.43/min [30000], rate=32142.86/min [40000], rate=25806.45/min [50000], rate=28571.43/min [60000], rate=30508.47/min [70000], rate=32061.07/min [80000], rate=33566.43/min [90000], rate=35294.12/min [100000], rate=36809.82/min [110000], rate=38372.09/min [120000], rate=39779.01/min [130000], rate=41269.84/min [140000], rate=42639.59/min [150000], rate=44117.65/min [160000], rate=45497.63/min [170000], rate=47004.61/min [180000], rate=48214.29/min [190000], rate=49565.22/min [200000], rate=50847.46/min [210000], rate=52282.16/min [220000], rate=53441.30/min [230000], rate=54980.08/min [240000], rate=56250.00/min [250000], rate=57471.26/min [260000], rate=58426.97/min [270000], rate=57446.81/min [280000], rate=56756.76/min [290000], rate=55769.23/min [300000], rate=54878.05/min [310000], rate=54385.96/min [320000], rate=53781.51/min [330000], rate=53369.27/min [340000], rate=52987.01/min [350000], rate=52631.58/min [360000], rate=52300.24/min [370000], rate=52112.68/min [380000], rate=52054.79/min [390000], rate=52000.00/min [400000], rate=51502.15/min [410000], rate=51250.00/min [420000], rate=51219.51/min [430000], rate=51394.42/min [440000], rate=51663.41/min [450000], rate=51823.42/min [460000], rate=52075.47/min [470000], rate=52125.69/min [480000], rate=52268.60/min [490000], rate=52406.42/min [500000], rate=52631.58/min [510000], rate=52849.74/min [520000], rate=53242.32/min [530000], rate=53625.63/min [540000], rate=53820.60/min [550000], rate=54098.36/min [560000], rate=54457.05/min [570000], rate=54807.69/min [580000], rate=55238.10/min [590000], rate=55660.38/min [600000], rate=56074.77/min [610000], rate=56568.78/min [620000], rate=57055.21/min [630000], rate=57186.08/min [640000], rate=57228.02/min [650000], rate=57101.02/min [660000], rate=57060.52/min [670000], rate=57102.27/min [680000], rate=57142.86/min [690000], rate=57261.41/min [700000], rate=57455.54/min [710000], rate=57567.57/min [720000], rate=57754.01/min [730000], rate=57936.51/min [740000], rate=58115.18/min [750000], rate=58365.76/min [760000], rate=58762.89/min [770000], rate=59383.03/min [780000], rate=60000.00/min [790000], rate=60305.34/min [800000], rate=60682.68/min [810000], rate=60978.67/min [820000], rate=61346.63/min [830000], rate=61710.04/min [840000], rate=61916.46/min [850000], rate=62195.12/min [860000], rate=62318.84/min [870000], rate=62740.38/min [880000], rate=63385.35/min [890000], rate=63647.20/min [900000], rate=63754.43/min [910000], rate=64009.38/min [920000], rate=64561.40/min [930000], rate=65034.97/min [940000], rate=65127.02/min [950000], rate=65442.02/min [960000], rate=65753.42/min [970000], rate=66061.29/min [980000], rate=66290.87/min [990000], rate=66816.65/min [1000000], rate=67415.73/min [1010000], rate=67408.23/min [1020000], rate=67326.73/min [1030000], rate=66666.67/min [1040000], rate=66737.97/min [1050000], rate=67307.69/min [1060000], rate=67587.67/min [1070000], rate=67793.03/min [1080000], rate=68067.23/min [1090000], rate=68338.56/min [1100000], rate=68607.07/min [1110000], rate=68872.80/min [1120000], rate=69135.80/min [1130000], rate=69325.15/min [1140000], rate=69371.20/min [1150000], rate=69416.50/min [1160000], rate=69530.47/min [1170000], rate=69642.86/min [1180000], rate=69822.49/min [1190000], rate=69863.01/min [1200000], rate=69699.90/min [1210000], rate=69606.90/min [1220000], rate=69581.75/min [1230000], rate=69426.15/min [1240000], rate=69467.79/min [1250000], rate=69316.08/min [1260000], rate=69294.23/min [1270000], rate=69398.91/min [1280000], rate=69502.26/min [1290000], rate=69604.32/min [1300000], rate=69767.44/min [1310000], rate=69804.62/min [1320000], rate=69902.91/min [1330000], rate=69210.75/min [1340000], rate=68193.38/min [1350000], rate=66997.52/min [1360000], rate=65966.05/min [1370000], rate=65238.10/min [1380000], rate=64788.73/min [1390000], rate=64451.31/min [1400000], rate=63926.94/min [1410000], rate=63418.29/min [1420000], rate=62924.67/min [1430000], rate=62582.06/min [1440000], rate=62337.66/min [1450000], rate=62009.98/min [1460000], rate=61820.75/min [1470000], rate=61678.32/min [1480000], rate=61495.84/min [1490000], rate=61401.10/min [1500000], rate=61349.69/min [1510000], rate=61133.60/min [1520000], rate=60840.56/min [1530000], rate=60674.16/min -building interval tree based on /tmp/nxf.94ibH9L1T6/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=54545.45/min [20000], rate=60000.00/min [30000], rate=60000.00/min [40000], rate=63157.89/min [50000], rate=65217.39/min [60000], rate=67924.53/min [70000], rate=68852.46/min [80000], rate=70588.24/min [90000], rate=71052.63/min [100000], rate=73170.73/min [110000], rate=75000.00/min [120000], rate=77419.35/min [130000], rate=80412.37/min [140000], rate=82352.94/min [150000], rate=84112.15/min [160000], rate=84210.53/min [170000], rate=84297.52/min [180000], rate=84375.00/min [190000], rate=83823.53/min [200000], rate=83916.08/min [210000], rate=84563.76/min [220000], rate=85714.29/min [230000], rate=86250.00/min [240000], rate=85714.29/min [250000], rate=84269.66/min [260000], rate=82539.68/min [270000], rate=81818.18/min [280000], rate=81159.42/min [290000], rate=80555.56/min [300000], rate=80000.00/min [310000], rate=80172.41/min [320000], rate=80672.27/min [330000], rate=81147.54/min [340000], rate=81600.00/min [350000], rate=82031.25/min [360000], rate=82758.62/min [370000], rate=83458.65/min [380000], rate=84758.36/min [390000], rate=86029.41/min [400000], rate=87591.24/min [410000], rate=88489.21/min [420000], rate=87500.00/min [430000], rate=86577.18/min [440000], rate=85993.49/min [450000], rate=85173.50/min [460000], rate=84662.58/min [470000], rate=83928.57/min [480000], rate=83720.93/min [490000], rate=83522.73/min [500000], rate=83565.46/min [510000], rate=83606.56/min [520000], rate=83870.97/min [530000], rate=84126.98/min [540000], rate=84816.75/min [550000], rate=85051.55/min [560000], rate=85279.19/min [570000], rate=84653.47/min [580000], rate=83453.24/min [590000], rate=82903.98/min [600000], rate=82758.62/min [610000], rate=81879.19/min [620000], rate=81045.75/min [630000], rate=80425.53/min [640000], rate=80000.00/min [650000], rate=79754.60/min [660000], rate=79678.07/min [670000], rate=79446.64/min [680000], rate=79069.77/min [690000], rate=78857.14/min [700000], rate=78651.69/min [710000], rate=78453.04/min [720000], rate=78119.35/min [730000], rate=77935.94/min [740000], rate=77894.74/min [750000], rate=77989.60/min [760000], rate=77683.13/min [770000], rate=77647.06/min [780000], rate=77355.37/min [790000], rate=77324.63/min [800000], rate=77544.43/min [810000], rate=77388.54/min [820000], rate=77237.05/min [830000], rate=77089.78/min [840000], rate=76946.56/min [850000], rate=76807.23/min [860000], rate=76671.62/min [870000], rate=76315.79/min [880000], rate=75862.07/min [890000], rate=75105.49/min [900000], rate=74688.80/min [910000], rate=74590.16/min [920000], rate=73895.58/min [930000], rate=73421.05/min [940000], rate=73151.75/min [950000], rate=72983.35/min [960000], rate=72911.39/min [970000], rate=72659.18/min [980000], rate=72682.32/min [990000], rate=72616.14/min [1000000], rate=72727.27/min [1010000], rate=72749.10/min [1020000], rate=72943.98/min [1030000], rate=73136.09/min [1040000], rate=73325.50/min [1050000], rate=71753.99/min [1060000], rate=70198.68/min [1070000], rate=68370.61/min [1080000], rate=66873.07/min [1090000], rate=66328.60/min [1100000], rate=64833.01/min [1110000], rate=64100.10/min [1120000], rate=63456.09/min [1130000], rate=62661.74/min [1140000], rate=61235.45/min [1150000], rate=60792.95/min [1160000], rate=60416.67/min [1170000], rate=59897.61/min [1180000], rate=59495.80/min [1190000], rate=59203.98/min [1200000], rate=58919.80/min [1210000], rate=58642.97/min [1220000], rate=58419.79/min [1230000], rate=58432.30/min [1240000], rate=58490.57/min [1250000], rate=58365.76/min [1260000], rate=58288.36/min [1270000], rate=58256.88/min [1280000], rate=58225.93/min [1290000], rate=58239.28/min [1300000], rate=58165.55/min [1310000], rate=58265.38/min [1320000], rate=58364.04/min [1330000], rate=58504.40/min [1340000], rate=58643.33/min [1350000], rate=58738.22/min [1360000], rate=58789.63/min [1370000], rate=58672.38/min [1380000], rate=58806.82/min [1390000], rate=59107.02/min [1400000], rate=59071.73/min [1410000], rate=59119.50/min [1420000], rate=59207.78/min [1430000], rate=59295.09/min [1440000], rate=59381.44/min [1450000], rate=58389.26/min [1460000], rate=57669.52/min [1470000], rate=57050.45/min [1480000], rate=56524.51/min [1490000], rate=56085.32/min [1500000], rate=55624.23/min [1510000], rate=55277.61/min [1520000], rate=54939.76/min [1530000], rate=54838.71/min -building interval tree based on /tmp/nxf.94ibH9L1T6/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=85714.29/min [20000], rate=100000.00/min [30000], rate=112500.00/min [40000], rate=141176.47/min [50000], rate=142857.14/min [60000], rate=144000.00/min [70000], rate=144827.59/min [80000], rate=145454.55/min [90000], rate=131707.32/min [100000], rate=127659.57/min [110000], rate=122222.22/min [120000], rate=133333.33/min [130000], rate=132203.39/min [140000], rate=129230.77/min [150000], rate=130434.78/min [160000], rate=128000.00/min [170000], rate=132467.53/min [180000], rate=138461.54/min [190000], rate=139024.39/min [200000], rate=136363.64/min [210000], rate=140000.00/min [220000], rate=140425.53/min [230000], rate=142268.04/min [240000], rate=142574.26/min [250000], rate=145631.07/min [260000], rate=151456.31/min [270000], rate=148623.85/min [280000], rate=150000.00/min [290000], rate=147457.63/min [300000], rate=148760.33/min [310000], rate=152459.02/min [320000], rate=153600.00/min [330000], rate=151145.04/min [340000], rate=153383.46/min [350000], rate=153284.67/min [360000], rate=154285.71/min [370000], rate=154166.67/min [380000], rate=154054.05/min [390000], rate=152941.18/min [400000], rate=153846.15/min [410000], rate=151851.85/min [420000], rate=155555.56/min [430000], rate=156363.64/min [440000], rate=156213.02/min [450000], rate=156069.36/min [460000], rate=156818.18/min [470000], rate=156666.67/min [480000], rate=156521.74/min [490000], rate=150000.00/min [500000], rate=136363.64/min [510000], rate=127500.00/min [520000], rate=119540.23/min [530000], rate=112765.96/min [540000], rate=107284.77/min [550000], rate=102484.47/min [560000], rate=98245.61/min [570000], rate=94214.88/min [580000], rate=90625.00/min [590000], rate=88059.70/min [600000], rate=84905.66/min [610000], rate=82247.19/min [620000], rate=79828.33/min [630000], rate=77777.78/min [640000], rate=76039.60/min [650000], rate=74712.64/min [660000], rate=73605.95/min [670000], rate=72694.39/min [680000], rate=71830.99/min [690000], rate=71012.01/min [700000], rate=70469.80/min [710000], rate=69836.07/min [720000], rate=69341.89/min [730000], rate=68867.92/min [740000], rate=68518.52/min [750000], rate=67567.57/min [760000], rate=66862.17/min [770000], rate=66000.00/min [780000], rate=65090.40/min [790000], rate=64227.64/min [800000], rate=63492.06/min [810000], rate=62790.70/min [820000], rate=62436.55/min [830000], rate=61940.30/min [840000], rate=61463.41/min [850000], rate=61077.84/min [860000], rate=60777.39/min [870000], rate=60627.18/min [880000], rate=60481.10/min [890000], rate=60407.24/min [900000], rate=60402.68/min [910000], rate=60000.00/min [920000], rate=59611.23/min [930000], rate=59172.85/min [940000], rate=58872.65/min [950000], rate=59067.36/min [960000], rate=59198.36/min [970000], rate=59327.22/min [980000], rate=59634.89/min [990000], rate=59281.44/min [1000000], rate=58939.10/min [1010000], rate=58834.95/min [1020000], rate=58620.69/min [1030000], rate=58522.73/min [1040000], rate=58100.56/min [1050000], rate=57851.24/min [1060000], rate=57765.67/min [1070000], rate=57630.16/min [1080000], rate=57600.00/min [1090000], rate=57621.15/min [1100000], rate=57541.41/min [1110000], rate=57562.66/min [1120000], rate=57632.93/min [1130000], rate=57604.08/min [1140000], rate=57672.85/min [1150000], rate=57740.59/min [1160000], rate=57807.31/min [1170000], rate=56796.12/min [1180000], rate=56145.92/min [1190000], rate=55220.42/min [1200000], rate=53811.66/min [1210000], rate=53382.35/min [1220000], rate=52966.71/min [1230000], rate=52414.77/min [1240000], rate=52137.35/min [1250000], rate=51939.06/min [1260000], rate=51219.51/min [1270000], rate=51072.39/min [1280000], rate=50962.18/min [1290000], rate=50854.14/min [1300000], rate=50781.25/min [1310000], rate=50742.41/min [1320000], rate=50736.71/min [1330000], rate=50698.86/min [1340000], rate=50725.55/min [1350000], rate=50751.88/min [1360000], rate=50809.46/min [1370000], rate=50929.37/min [1380000], rate=51016.64/min [1390000], rate=51134.27/min [1400000], rate=51282.05/min [1410000], rate=51397.33/min [1420000], rate=51573.85/min [1430000], rate=51285.12/min [1440000], rate=50853.44/min [1450000], rate=50259.97/min [1460000], rate=50028.56/min [1470000], rate=49830.51/min [1480000], rate=49692.22/min [1490000], rate=49556.54/min [1500000], rate=49369.17/min [1510000], rate=49185.67/min [1520000], rate=49058.63/min [1530000], rate=48777.90/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.94ibH9L1T6/ctat_genome_lib_build_dir --filt_file /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 0.00 reads per min processed... 12000000.00 reads per min processed... 18000000.00 reads per min processed... 24000000.00 reads per min processed... 10000000.00 reads per min processed... 9000000.00 reads per min processed... 7000000.00 reads per min processed... 6000000.00 reads per min processed... 5400000.00 reads per min processed... 5454545.45 reads per min processed... 5076923.08 reads per min processed... 4800000.00 reads per min processed... 4875000.00 reads per min processed... 4941176.47 reads per min processed... 5000000.00 reads per min processed... 4800000.00 reads per min processed... 4857142.86 reads per min processed... 4695652.17 reads per min processed... 4560000.00 reads per min processed... 4285714.29 reads per min processed... 4344827.59 reads per min processed... 4258064.52 reads per min processed... 4181818.18 reads per min processed... 4114285.71 reads per min processed... 4054054.05 reads per min processed... 4105263.16 reads per min processed... 4050000.00 reads per min processed... 4097560.98 reads per min processed... 4046511.63 reads per min processed... 4000000.00 reads per min processed... 3957446.81 reads per min processed... 4000000.00 reads per min processed... 4125000.00 reads per min processed... 4163265.31 reads per min processed... 4200000.00 reads per min processed... 4153846.15 reads per min processed... 4036363.64 reads per min processed... 4000000.00 reads per min processed... 4034482.76 reads per min processed... 4000000.00 reads per min processed... 3967741.94 reads per min processed... 3937500.00 reads per min processed... 3909090.91 reads per min processed... 3882352.94 reads per min processed... 3857142.86 reads per min processed... 3833333.33 reads per min processed... 3863013.70 reads per min processed... 3840000.00 reads per min processed... 3818181.82 reads per min processed... 3846153.85 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.94ibH9L1T6/aih-tih-sc-e1cae1-R1_A23YTGFLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.94ibH9L1T6/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -262052.210636 EM: Round [1] log likelihood: -261830.826573 EM: Round [2] log likelihood: -261756.919611 EM: Round [3] log likelihood: -261724.626151 EM: Round [4] log likelihood: -261708.268934 EM: Round [5] log likelihood: -261699.264235 EM: Round [6] log likelihood: -261693.996401 EM: Round [7] log likelihood: -261690.740997 EM: Round [8] log likelihood: -261688.620645 EM: Round [9] log likelihood: -261687.169350 EM: Round [10] log likelihood: -261686.130151 EM: Round [11] log likelihood: -261685.355973 EM: Round [12] log likelihood: -261684.759383 EM: Round [13] log likelihood: -261684.286391 EM: Round [14] log likelihood: -261683.902390 EM: Round [15] log likelihood: -261683.584403 EM: Round [16] log likelihood: -261683.316670 EM: Round [17] log likelihood: -261683.088060 EM: Round [18] log likelihood: -261682.890506 EM: Round [19] log likelihood: -261682.718028 EM: Round [20] log likelihood: -261682.566103 EM: Round [21] log likelihood: -261682.431250 EM: Round [22] log likelihood: -261682.310747 EM: Round [23] log likelihood: -261682.202437 EM: Round [24] log likelihood: -261682.104587 EM: Round [25] log likelihood: -261682.015787 EM: Round [26] log likelihood: -261681.934880 EM: Round [27] log likelihood: -261681.860905 EM: Round [28] log likelihood: -261681.793058 EM: Round [29] log likelihood: -261681.730657 EM: Round [30] log likelihood: -261681.673125 EM: Round [31] log likelihood: -261681.619961 EM: Round [32] log likelihood: -261681.570737 EM: Round [33] log likelihood: -261681.525078 EM: Round [34] log likelihood: -261681.482656 EM: Round [35] log likelihood: -261681.443182 EM: Round [36] log likelihood: -261681.406401 EM: Round [37] log likelihood: -261681.372087 EM: Round [38] log likelihood: -261681.340037 EM: Round [39] log likelihood: -261681.310069 EM: Round [40] log likelihood: -261681.282020 EM: Round [41] log likelihood: -261681.255744 EM: Round [42] log likelihood: -261681.231105 EM: Round [43] log likelihood: -261681.207985 EM: Round [44] log likelihood: -261681.186271 EM: Round [45] log likelihood: -261681.165865 EM: Round [46] log likelihood: -261681.146673 EM: Round [47] log likelihood: -261681.128612 EM: Round [48] log likelihood: -261681.111605 EM: Round [49] log likelihood: -261681.095580 EM: Round [50] log likelihood: -261681.080472 EM: Round [51] log likelihood: -261681.066221 EM: Round [52] log likelihood: -261681.052771 EM: Round [53] log likelihood: -261681.040071 EM: Round [54] log likelihood: -261681.028072 EM: Round [55] log likelihood: -261681.016730 EM: Round [56] log likelihood: -261681.006005 EM: Round [57] log likelihood: -261680.995858 EM: Round [58] log likelihood: -261680.986254 EM: Round [59] log likelihood: -261680.977160 EM: Round [60] log likelihood: -261680.968545 EM: Round [61] log likelihood: -261680.960380 EM: Round [62] log likelihood: -261680.952639 EM: Round [63] log likelihood: -261680.945296 EM: Round [64] log likelihood: -261680.938329 EM: Round [65] log likelihood: -261680.931716 EM: Round [66] log likelihood: -261680.925436 EM: Round [67] log likelihood: -261680.919471 EM: Round [68] log likelihood: -261680.913802 EM: Round [69] log likelihood: -261680.908413 EM: Round [70] log likelihood: -261680.903287 EM: Round [71] log likelihood: -261680.898412 EM: Round [72] log likelihood: -261680.893771 EM: Round [73] log likelihood: -261680.889354 EM: Round [74] log likelihood: -261680.885147 EM: Round [75] log likelihood: -261680.881140 EM: Round [76] log likelihood: -261680.877320 EM: Round [77] log likelihood: -261680.873680 EM: Round [78] log likelihood: -261680.870208 EM: Round [79] log likelihood: -261680.866896 EM: Round [80] log likelihood: -261680.863735 EM: Round [81] log likelihood: -261680.860719 EM: Round [82] log likelihood: -261680.857838 EM: Round [83] log likelihood: -261680.855087 EM: Round [84] log likelihood: -261680.852459 EM: Round [85] log likelihood: -261680.849946 EM: Round [86] log likelihood: -261680.847545 EM: Round [87] log likelihood: -261680.845248 EM: Round [88] log likelihood: -261680.843051 EM: Round [89] log likelihood: -261680.840948 EM: Round [90] log likelihood: -261680.838936 EM: Round [91] log likelihood: -261680.837010 EM: Round [92] log likelihood: -261680.835164 EM: Round [93] log likelihood: -261680.833397 EM: Round [94] log likelihood: -261680.831703 EM: Round [95] log likelihood: -261680.830079 EM: Round [96] log likelihood: -261680.828522 EM: Round [97] log likelihood: -261680.827029 EM: Round [98] log likelihood: -261680.825597 EM: Round [99] log likelihood: -261680.824223 EM: Round [100] log likelihood: -261680.822904 EM: Round [101] log likelihood: -261680.821637 EM: Round [102] log likelihood: -261680.820421 EM: Round [103] log likelihood: -261680.819252 EM: Round [104] log likelihood: -261680.818130 EM: Round [105] log likelihood: -261680.817051 EM: Round [106] log likelihood: -261680.816014 EM: Round [107] log likelihood: -261680.815016 EM: Round [108] log likelihood: -261680.814057 EM: Round [109] log likelihood: -261680.813134 EM: Round [110] log likelihood: -261680.812246 EM: Round [111] log likelihood: -261680.811392 EM: Round [112] log likelihood: -261680.810569 EM: Round [113] log likelihood: -261680.809777 EM: Round [114] log likelihood: -261680.809014 EM: Round [115] log likelihood: -261680.808278 EM: Round [116] log likelihood: -261680.807570 EM: Round [117] log likelihood: -261680.806887 EM: Round [118] log likelihood: -261680.806229 EM: Round [119] log likelihood: -261680.805594 EM: Round [120] log likelihood: -261680.804982 EM: Round [121] log likelihood: -261680.804392 EM: Round [122] log likelihood: -261680.803822 EM: Round [123] log likelihood: -261680.803272 EM: Round [124] log likelihood: -261680.802742 EM: Round [125] log likelihood: -261680.802229 EM: Round [126] log likelihood: -261680.801735 EM: Round [127] log likelihood: -261680.801257 EM: Round [128] log likelihood: -261680.800795 EM: Round [129] log likelihood: -261680.800349 EM: Round [130] log likelihood: -261680.799918 EM: Round [131] log likelihood: -261680.799502 EM: Round [132] log likelihood: -261680.799099 EM: Round [133] log likelihood: -261680.798710 EM: Round [134] log likelihood: -261680.798333 EM: Round [135] log likelihood: -261680.797969 EM: Round [136] log likelihood: -261680.797616 EM: Round [137] log likelihood: -261680.797276 EM: Round [138] log likelihood: -261680.796946 EM: Round [139] log likelihood: -261680.796626 EM: Round [140] log likelihood: -261680.796317 EM: Round [141] log likelihood: -261680.796018 EM: Round [142] log likelihood: -261680.795728 EM: Round [143] log likelihood: -261680.795447 EM: Round [144] log likelihood: -261680.795175 EM: Round [145] log likelihood: -261680.794911 EM: Round [146] log likelihood: -261680.794656 EM: Round [147] log likelihood: -261680.794408 EM: Round [148] log likelihood: -261680.794168 EM: Round [149] log likelihood: -261680.793936 EM: Round [150] log likelihood: -261680.793710 EM: Round [151] log likelihood: -261680.793491 EM: Round [152] log likelihood: -261680.793279 EM: Round [153] log likelihood: -261680.793074 EM: Round [154] log likelihood: -261680.792874 EM: Round [155] log likelihood: -261680.792680 EM: Round [156] log likelihood: -261680.792492 EM: Round [157] log likelihood: -261680.792310 EM: Round [158] log likelihood: -261680.792133 EM: Round [159] log likelihood: -261680.791961 EM: Round [160] log likelihood: -261680.791794 EM: Round [161] log likelihood: -261680.791632 EM: Round [162] log likelihood: -261680.791475 EM: Round [163] log likelihood: -261680.791322 EM: Round [164] log likelihood: -261680.791173 EM: Round [165] log likelihood: -261680.791029 EM: Round [166] log likelihood: -261680.790889 EM: Round [167] log likelihood: -261680.790752 EM: Round [168] log likelihood: -261680.790620 EM: Round [169] log likelihood: -261680.790491 EM: Round [170] log likelihood: -261680.790366 EM: Round [171] log likelihood: -261680.790245 EM: Round [172] log likelihood: -261680.790126 EM: Round [173] log likelihood: -261680.790011 EM: Round [174] log likelihood: -261680.789899 EM: Round [175] log likelihood: -261680.789791 EM: Round [176] log likelihood: -261680.789685 EM: Round [177] log likelihood: -261680.789582 EM: Round [178] log likelihood: -261680.789482 EM: Round [179] log likelihood: -261680.789384 EM: Stopping iterations at round 179 due to insufficient improvement in likelihood. EM: Starting log likelihood: -261733.270889 EM: Round [1] log likelihood: -261554.012965 EM: Round [2] log likelihood: -261492.478955 EM: Round [3] log likelihood: -261465.307189 EM: Round [4] log likelihood: -261451.581809 EM: Round [5] log likelihood: -261444.073695 EM: Round [6] log likelihood: -261439.716036 EM: Round [7] log likelihood: -261437.047045 EM: Round [8] log likelihood: -261435.324787 EM: Round [9] log likelihood: -261434.156795 EM: Round [10] log likelihood: -261433.327828 EM: Round [11] log likelihood: -261432.715457 EM: Round [12] log likelihood: -261432.247360 EM: Round [13] log likelihood: -261431.879135 EM: Round [14] log likelihood: -261431.582464 EM: Round [15] log likelihood: -261431.338620 EM: Round [16] log likelihood: -261431.134803 EM: Round [17] log likelihood: -261430.961996 EM: Round [18] log likelihood: -261430.813686 EM: Round [19] log likelihood: -261430.685053 EM: Round [20] log likelihood: -261430.572465 EM: Round [21] log likelihood: -261430.473136 EM: Round [22] log likelihood: -261430.384893 EM: Round [23] log likelihood: -261430.306020 EM: Round [24] log likelihood: -261430.235145 EM: Round [25] log likelihood: -261430.171156 EM: Round [26] log likelihood: -261430.113145 EM: Round [27] log likelihood: -261430.060359 EM: Round [28] log likelihood: -261430.012171 EM: Round [29] log likelihood: -261429.968053 EM: Round [30] log likelihood: -261429.927557 EM: Round [31] log likelihood: -261429.890299 EM: Round [32] log likelihood: -261429.855949 EM: Round [33] log likelihood: -261429.824221 EM: Round [34] log likelihood: -261429.794864 EM: Round [35] log likelihood: -261429.767659 EM: Round [36] log likelihood: -261429.742413 EM: Round [37] log likelihood: -261429.718955 EM: Round [38] log likelihood: -261429.697131 EM: Round [39] log likelihood: -261429.676805 EM: Round [40] log likelihood: -261429.657856 EM: Round [41] log likelihood: -261429.640172 EM: Round [42] log likelihood: -261429.623655 EM: Round [43] log likelihood: -261429.608214 EM: Round [44] log likelihood: -261429.593768 EM: Round [45] log likelihood: -261429.580243 EM: Round [46] log likelihood: -261429.567570 EM: Round [47] log likelihood: -261429.555688 EM: Round [48] log likelihood: -261429.544541 EM: Round [49] log likelihood: -261429.534075 EM: Round [50] log likelihood: -261429.524244 EM: Round [51] log likelihood: -261429.515003 EM: Round [52] log likelihood: -261429.506312 EM: Round [53] log likelihood: -261429.498134 EM: Round [54] log likelihood: -261429.490435 EM: Round [55] log likelihood: -261429.483181 EM: Round [56] log likelihood: -261429.476345 EM: Round [57] log likelihood: -261429.469899 EM: Round [58] log likelihood: -261429.463818 EM: Round [59] log likelihood: -261429.458077 EM: Round [60] log likelihood: -261429.452657 EM: Round [61] log likelihood: -261429.447535 EM: Round [62] log likelihood: -261429.442694 EM: Round [63] log likelihood: -261429.438115 EM: Round [64] log likelihood: -261429.433784 EM: Round [65] log likelihood: -261429.429684 EM: Round [66] log likelihood: -261429.425802 EM: Round [67] log likelihood: -261429.422124 EM: Round [68] log likelihood: -261429.418638 EM: Round [69] log likelihood: -261429.415332 EM: Round [70] log likelihood: -261429.412197 EM: Round [71] log likelihood: -261429.409221 EM: Round [72] log likelihood: -261429.406396 EM: Round [73] log likelihood: -261429.403713 EM: Round [74] log likelihood: -261429.401163 EM: Round [75] log likelihood: -261429.398740 EM: Round [76] log likelihood: -261429.396435 EM: Round [77] log likelihood: -261429.394242 EM: Round [78] log likelihood: -261429.392156 EM: Round [79] log likelihood: -261429.390169 EM: Round [80] log likelihood: -261429.388276 EM: Round [81] log likelihood: -261429.386473 EM: Round [82] log likelihood: -261429.384754 EM: Round [83] log likelihood: -261429.383115 EM: Round [84] log likelihood: -261429.381551 EM: Round [85] log likelihood: -261429.380059 EM: Round [86] log likelihood: -261429.378634 EM: Round [87] log likelihood: -261429.377273 EM: Round [88] log likelihood: -261429.375974 EM: Round [89] log likelihood: -261429.374731 EM: Round [90] log likelihood: -261429.373543 EM: Round [91] log likelihood: -261429.372407 EM: Round [92] log likelihood: -261429.371321 EM: Round [93] log likelihood: -261429.370280 EM: Round [94] log likelihood: -261429.369284 EM: Round [95] log likelihood: -261429.368331 EM: Round [96] log likelihood: -261429.367417 EM: Round [97] log likelihood: -261429.366541 EM: Round [98] log likelihood: -261429.365701 EM: Round [99] log likelihood: -261429.364896 EM: Round [100] log likelihood: -261429.364124 EM: Round [101] log likelihood: -261429.363383 EM: Round [102] log likelihood: -261429.362671 EM: Round [103] log likelihood: -261429.361988 EM: Round [104] log likelihood: -261429.361332 EM: Round [105] log likelihood: -261429.360701 EM: Round [106] log likelihood: -261429.360095 EM: Round [107] log likelihood: -261429.359513 EM: Round [108] log likelihood: -261429.358953 EM: Round [109] log likelihood: -261429.358414 EM: Round [110] log likelihood: -261429.357895 EM: Round [111] log likelihood: -261429.357397 EM: Round [112] log likelihood: -261429.356916 EM: Round [113] log likelihood: -261429.356454 EM: Round [114] log likelihood: -261429.356008 EM: Round [115] log likelihood: -261429.355579 EM: Round [116] log likelihood: -261429.355165 EM: Round [117] log likelihood: -261429.354767 EM: Round [118] log likelihood: -261429.354382 EM: Round [119] log likelihood: -261429.354012 EM: Round [120] log likelihood: -261429.353654 EM: Round [121] log likelihood: -261429.353309 EM: Round [122] log likelihood: -261429.352976 EM: Round [123] log likelihood: -261429.352655 EM: Round [124] log likelihood: -261429.352344 EM: Round [125] log likelihood: -261429.352045 EM: Round [126] log likelihood: -261429.351755 EM: Round [127] log likelihood: -261429.351475 EM: Round [128] log likelihood: -261429.351205 EM: Round [129] log likelihood: -261429.350944 EM: Round [130] log likelihood: -261429.350692 EM: Round [131] log likelihood: -261429.350447 EM: Round [132] log likelihood: -261429.350211 EM: Round [133] log likelihood: -261429.349983 EM: Round [134] log likelihood: -261429.349762 EM: Round [135] log likelihood: -261429.349548 EM: Round [136] log likelihood: -261429.349341 EM: Round [137] log likelihood: -261429.349141 EM: Round [138] log likelihood: -261429.348947 EM: Round [139] log likelihood: -261429.348759 EM: Round [140] log likelihood: -261429.348578 EM: Round [141] log likelihood: -261429.348402 EM: Round [142] log likelihood: -261429.348231 EM: Round [143] log likelihood: -261429.348066 EM: Round [144] log likelihood: -261429.347905 EM: Round [145] log likelihood: -261429.347750 EM: Round [146] log likelihood: -261429.347600 EM: Round [147] log likelihood: -261429.347454 EM: Round [148] log likelihood: -261429.347312 EM: Round [149] log likelihood: -261429.347175 EM: Round [150] log likelihood: -261429.347042 EM: Round [151] log likelihood: -261429.346913 EM: Round [152] log likelihood: -261429.346787 EM: Round [153] log likelihood: -261429.346666 EM: Round [154] log likelihood: -261429.346548 EM: Round [155] log likelihood: -261429.346433 EM: Round [156] log likelihood: -261429.346322 EM: Round [157] log likelihood: -261429.346214 EM: Round [158] log likelihood: -261429.346110 EM: Round [159] log likelihood: -261429.346008 EM: Round [160] log likelihood: -261429.345909 EM: Stopping iterations at round 160 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.94ibH9L1T6/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.94ibH9L1T6/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.94ibH9L1T6/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 175278499 > /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.94ibH9L1T6/ctat_genome_lib_build_dir > /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.94ibH9L1T6/ctat_genome_lib_build_dir --annotate /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.94ibH9L1T6/ctat_genome_lib_build_dir -done, see /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.94ibH9L1T6/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 2389, filtered: 10706) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.94ibH9L1T6/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.94ibH9L1T6/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000228863.8] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000254485.5] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000224086.6] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000224086.6] WARNING, no entry stored in dbm for [ENSG00000181126.13] WARNING, no entry stored in dbm for [ENSG00000271162.1] WARNING, no entry stored in dbm for [ENSG00000158482.10] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [ENSG00000128438.10] WARNING, no entry stored in dbm for [ENSG00000276758.1] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000203413.3] WARNING, no entry stored in dbm for [ENSG00000225594.1] WARNING, no entry stored in dbm for [ENSG00000236051.7] WARNING, no entry stored in dbm for [ENSG00000172965.17] WARNING, no entry stored in dbm for [ENSG00000204745.4] WARNING, no entry stored in dbm for [ENSG00000233013.10] WARNING, no entry stored in dbm for [ENSG00000269553.1] WARNING, no entry stored in dbm for [ENSG00000245958.6] WARNING, no entry stored in dbm for [ENSG00000230559.1] WARNING, no entry stored in dbm for [ENSG00000202058.1] WARNING, no entry stored in dbm for [ENSG00000200794.1] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000267586.7] WARNING, no entry stored in dbm for [ENSG00000234420.7] WARNING, no entry stored in dbm for [ENSG00000237036.5] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000281103.2] WARNING, no entry stored in dbm for [ENSG00000268189.2] WARNING, no entry stored in dbm for [ENSG00000286953.1] WARNING, no entry stored in dbm for [ENSG00000224523.1] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000287411.1] WARNING, no entry stored in dbm for [ENSG00000197301.7] WARNING, no entry stored in dbm for [ENSG00000060303.5] WARNING, no entry stored in dbm for [ENSG00000217067.2] WARNING, no entry stored in dbm for [ENSG00000213178.3] WARNING, no entry stored in dbm for [ENSG00000218300.1] WARNING, no entry stored in dbm for [ENSG00000271215.1] WARNING, no entry stored in dbm for [ENSG00000278834.1] WARNING, no entry stored in dbm for [ENSG00000268754.4] WARNING, no entry stored in dbm for [ENSG00000272655.2] WARNING, no entry stored in dbm for [ENSG00000230305.2] WARNING, no entry stored in dbm for [ENSG00000255185.6] WARNING, no entry stored in dbm for [ENSG00000245954.8] WARNING, no entry stored in dbm for [ENSG00000227492.2] WARNING, no entry stored in dbm for [ENSG00000258535.1] WARNING, no entry stored in dbm for [ENSG00000250127.1] WARNING, no entry stored in dbm for [ENSG00000286675.1] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000251557.2] WARNING, no entry stored in dbm for [ENSG00000229608.1] WARNING, no entry stored in dbm for [ENSG00000249375.8] WARNING, no entry stored in dbm for [ENSG00000231528.3] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000237773.7] WARNING, no entry stored in dbm for [ENSG00000243389.1] WARNING, no entry stored in dbm for [ENSG00000286277.1] WARNING, no entry stored in dbm for [ENSG00000224660.2] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000215022.7] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000248692.5] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000262831.1] WARNING, no entry stored in dbm for [ENSG00000272693.4] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000205485.13] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000205485.13] WARNING, no entry stored in dbm for [ENSG00000228204.2] WARNING, no entry stored in dbm for [ENSG00000241985.1] WARNING, no entry stored in dbm for [ENSG00000198496.12] WARNING, no entry stored in dbm for [ENSG00000270518.2] WARNING, no entry stored in dbm for [ENSG00000215158.9] WARNING, no entry stored in dbm for [ENSG00000226633.2] WARNING, no entry stored in dbm for [ENSG00000150276.8] WARNING, no entry stored in dbm for [ENSG00000274033.1] WARNING, no entry stored in dbm for [ENSG00000198416.9] WARNING, no entry stored in dbm for [ENSG00000177133.11] WARNING, no entry stored in dbm for [ENSG00000233013.10] WARNING, no entry stored in dbm for [ENSG00000283453.2] WARNING, no entry stored in dbm for [ENSG00000213976.4] WARNING, no entry stored in dbm for [ENSG00000267254.7] WARNING, no entry stored in dbm for [ENSG00000278156.2] WARNING, no entry stored in dbm for [ENSG00000257884.2] WARNING, no entry stored in dbm for [ENSG00000250802.7] WARNING, no entry stored in dbm for [ENSG00000236829.9] WARNING, no entry stored in dbm for [ENSG00000226471.6] WARNING, no entry stored in dbm for [ENSG00000222767.1] WARNING, no entry stored in dbm for [ENSG00000231915.2] WARNING, no entry stored in dbm for [ENSG00000253636.1] WARNING, no entry stored in dbm for [ENSG00000251022.6] WARNING, no entry stored in dbm for [ENSG00000234769.7] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [ENSG00000146556.14] WARNING, no entry stored in dbm for [ENSG00000231365.6] WARNING, no entry stored in dbm for [ENSG00000231346.5] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000173209.23] WARNING, no entry stored in dbm for [ENSG00000267736.2] WARNING, no entry stored in dbm for [ENSG00000233967.7] WARNING, no entry stored in dbm for [ENSG00000283674.3] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000231304.2] WARNING, no entry stored in dbm for [ENSG00000234663.7] WARNING, no entry stored in dbm for [ENSG00000229140.11] WARNING, no entry stored in dbm for [ENSG00000224062.4] WARNING, no entry stored in dbm for [ENSG00000235954.7] WARNING, no entry stored in dbm for [ENSG00000288008.1] WARNING, no entry stored in dbm for [ENSG00000258231.5] WARNING, no entry stored in dbm for [ENSG00000265148.6] WARNING, no entry stored in dbm for [ENSG00000270641.1] WARNING, no entry stored in dbm for [ENSG00000225914.3] WARNING, no entry stored in dbm for [ENSG00000253793.1] WARNING, no entry stored in dbm for [ENSG00000266913.1] WARNING, no entry stored in dbm for [ENSG00000251578.1] WARNING, no entry stored in dbm for [ENSG00000206337.12] WARNING, no entry stored in dbm for [ENSG00000244627.5] WARNING, no entry stored in dbm for [ENSG00000264113.2] WARNING, no entry stored in dbm for [ENSG00000214331.8] WARNING, no entry stored in dbm for [ENSG00000233183.3] WARNING, no entry stored in dbm for [ENSG00000218426.5] WARNING, no entry stored in dbm for [ENSG00000231770.6] WARNING, no entry stored in dbm for [ENSG00000236144.8] WARNING, no entry stored in dbm for [ENSG00000280560.2] WARNING, no entry stored in dbm for [ENSG00000281896.1] WARNING, no entry stored in dbm for [ENSG00000214559.3] WARNING, no entry stored in dbm for [ENSG00000235861.1] WARNING, no entry stored in dbm for [ENSG00000229436.1] WARNING, no entry stored in dbm for [ENSG00000234911.2] WARNING, no entry stored in dbm for [ENSG00000235833.1] WARNING, no entry stored in dbm for [ENSG00000266904.6] WARNING, no entry stored in dbm for [ENSG00000236404.10] WARNING, no entry stored in dbm for [ENSG00000285756.2] WARNING, no entry stored in dbm for [ENSG00000285756.2] WARNING, no entry stored in dbm for [ENSG00000223841.1] WARNING, no entry stored in dbm for [ENSG00000214195.4] WARNING, no entry stored in dbm for [ENSG00000259294.1] WARNING, no entry stored in dbm for [ENSG00000241316.8] WARNING, no entry stored in dbm for [ENSG00000246859.3] WARNING, no entry stored in dbm for [ENSG00000285424.1] WARNING, no entry stored in dbm for [ENSG00000240404.2] WARNING, no entry stored in dbm for [ENSG00000158482.10] WARNING, no entry stored in dbm for [ENSG00000277041.1] WARNING, no entry stored in dbm for [ENSG00000158482.10] WARNING, no entry stored in dbm for [ENSG00000260413.1] WARNING, no entry stored in dbm for [ENSG00000206120.11] WARNING, no entry stored in dbm for [ENSG00000204603.7] WARNING, no entry stored in dbm for [ENSG00000236253.7] WARNING, no entry stored in dbm for [ENSG00000224078.15] WARNING, no entry stored in dbm for [ENSG00000224078.15] WARNING, no entry stored in dbm for [ENSG00000255717.7] WARNING, no entry stored in dbm for [ENSG00000248121.8] WARNING, no entry stored in dbm for [ENSG00000230590.11] WARNING, no entry stored in dbm for [ENSG00000279345.1] WARNING, no entry stored in dbm for [ENSG00000283426.1] WARNING, no entry stored in dbm for [ENSG00000185684.15] WARNING, no entry stored in dbm for [ENSG00000258232.2] WARNING, no entry stored in dbm for [ENSG00000225313.5] WARNING, no entry stored in dbm for [ENSG00000280047.1] WARNING, no entry stored in dbm for [ENSG00000257976.1] WARNING, no entry stored in dbm for [ENSG00000286953.1] WARNING, no entry stored in dbm for [ENSG00000215790.8] WARNING, no entry stored in dbm for [ENSG00000215790.8] WARNING, no entry stored in dbm for [ENSG00000215790.8] WARNING, no entry stored in dbm for [ENSG00000283217.1] WARNING, no entry stored in dbm for [ENSG00000287262.1] WARNING, no entry stored in dbm for [ENSG00000224523.1] WARNING, no entry stored in dbm for [ENSG00000231064.7] WARNING, no entry stored in dbm for [ENSG00000234297.2] WARNING, no entry stored in dbm for [ENSG00000247950.7] WARNING, no entry stored in dbm for [ENSG00000237604.1] WARNING, no entry stored in dbm for [ENSG00000185485.14] WARNING, no entry stored in dbm for [ENSG00000188002.10] WARNING, no entry stored in dbm for [ENSG00000227681.5] WARNING, no entry stored in dbm for [ENSG00000170089.15] WARNING, no entry stored in dbm for [ENSG00000227545.1] WARNING, no entry stored in dbm for [ENSG00000230871.1] WARNING, no entry stored in dbm for [ENSG00000224279.2] WARNING, no entry stored in dbm for [ENSG00000239881.1] WARNING, no entry stored in dbm for [ENSG00000228665.2] WARNING, no entry stored in dbm for [ENSG00000249851.1] WARNING, no entry stored in dbm for [ENSG00000228223.3] WARNING, no entry stored in dbm for [ENSG00000231063.1] WARNING, no entry stored in dbm for [ENSG00000241157.1] WARNING, no entry stored in dbm for [ENSG00000237041.1] WARNING, no entry stored in dbm for [ENSG00000233287.1] WARNING, no entry stored in dbm for [ENSG00000226128.1] WARNING, no entry stored in dbm for [ENSG00000184319.16] WARNING, no entry stored in dbm for [ENSG00000241860.7] WARNING, no entry stored in dbm for [ENSG00000231908.1] WARNING, no entry stored in dbm for [ENSG00000238825.1] WARNING, no entry stored in dbm for [ENSG00000212605.1] WARNING, no entry stored in dbm for [ENSG00000207269.1] WARNING, no entry stored in dbm for [ENSG00000201201.1] WARNING, no entry stored in dbm for [ENSG00000231259.5] WARNING, no entry stored in dbm for [ENSG00000286952.1] WARNING, no entry stored in dbm for [ENSG00000265097.1] WARNING, no entry stored in dbm for [ENSG00000230087.1] WARNING, no entry stored in dbm for [ENSG00000285106.2] WARNING, no entry stored in dbm for [ENSG00000266520.1] WARNING, no entry stored in dbm for [ENSG00000196312.15] WARNING, no entry stored in dbm for [ENSG00000259856.1] WARNING, no entry stored in dbm for [ENSG00000246263.3] WARNING, no entry stored in dbm for [ENSG00000269416.6] WARNING, no entry stored in dbm for [ENSG00000286655.1] WARNING, no entry stored in dbm for [ENSG00000249856.1] WARNING, no entry stored in dbm for [ENSG00000288556.1] WARNING, no entry stored in dbm for [ENSG00000275374.1] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000230711.2] WARNING, no entry stored in dbm for [ENSG00000205771.6] WARNING, no entry stored in dbm for [ENSG00000251495.1] WARNING, no entry stored in dbm for [ENSG00000176840.12] WARNING, no entry stored in dbm for [ENSG00000245694.10] WARNING, no entry stored in dbm for [ENSG00000254092.2] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000205746.9] WARNING, no entry stored in dbm for [ENSG00000227827.3] WARNING, no entry stored in dbm for [ENSG00000244257.5] WARNING, no entry stored in dbm for [ENSG00000272578.5] WARNING, no entry stored in dbm for [ENSG00000233017.3] WARNING, no entry stored in dbm for [ENSG00000253237.2] WARNING, no entry stored in dbm for [ENSG00000181171.5] WARNING, no entry stored in dbm for [ENSG00000286027.1] WARNING, no entry stored in dbm for [ENSG00000225856.2] WARNING, no entry stored in dbm for [ENSG00000247774.7] WARNING, no entry stored in dbm for [ENSG00000215546.2] WARNING, no entry stored in dbm for [ENSG00000249444.2] WARNING, no entry stored in dbm for [ENSG00000267868.1] WARNING, no entry stored in dbm for [ENSG00000228060.3] WARNING, no entry stored in dbm for [ENSG00000257838.5] WARNING, no entry stored in dbm for [ENSG00000276548.1] WARNING, no entry stored in dbm for [ENSG00000255215.1] WARNING, no entry stored in dbm for [ENSG00000244479.7] WARNING, no entry stored in dbm for [ENSG00000204959.4] WARNING, no entry stored in dbm for [ENSG00000206573.9] WARNING, no entry stored in dbm for [ENSG00000249419.1] WARNING, no entry stored in dbm for [ENSG00000285483.1] WARNING, no entry stored in dbm for [ENSG00000106133.18] WARNING, no entry stored in dbm for [ENSG00000259275.4] WARNING, no entry stored in dbm for [ENSG00000279539.1] WARNING, no entry stored in dbm for [ENSG00000225159.1] WARNING, no entry stored in dbm for [ENSG00000237445.2] WARNING, no entry stored in dbm for [ENSG00000214807.2] WARNING, no entry stored in dbm for [ENSG00000226703.1] WARNING, no entry stored in dbm for [ENSG00000244251.1] WARNING, no entry stored in dbm for [ENSG00000133624.13] WARNING, no entry stored in dbm for [ENSG00000277053.4] WARNING, no entry stored in dbm for [ENSG00000135502.19] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000286597.1] WARNING, no entry stored in dbm for [ENSG00000265489.1] WARNING, no entry stored in dbm for [ENSG00000198496.12] WARNING, no entry stored in dbm for [ENSG00000198496.12] WARNING, no entry stored in dbm for [ENSG00000262879.6] WARNING, no entry stored in dbm for [ENSG00000270231.4] WARNING, no entry stored in dbm for [ENSG00000258590.5] WARNING, no entry stored in dbm for [ENSG00000267749.1] WARNING, no entry stored in dbm for [ENSG00000235823.3] WARNING, no entry stored in dbm for [ENSG00000228323.2] WARNING, no entry stored in dbm for [ENSG00000237471.2] WARNING, no entry stored in dbm for [ENSG00000197847.12] WARNING, no entry stored in dbm for [ENSG00000234072.1] WARNING, no entry stored in dbm for [ENSG00000257480.1] WARNING, no entry stored in dbm for [ENSG00000225133.1] WARNING, no entry stored in dbm for [ENSG00000224078.15] WARNING, no entry stored in dbm for [ENSG00000261971.8] WARNING, no entry stored in dbm for [ENSG00000234323.8] WARNING, no entry stored in dbm for [ENSG00000225783.8] WARNING, no entry stored in dbm for [ENSG00000246731.3] WARNING, no entry stored in dbm for [ENSG00000235280.2] WARNING, no entry stored in dbm for [ENSG00000288598.2] WARNING, no entry stored in dbm for [ENSG00000286742.1] WARNING, no entry stored in dbm for [ENSG00000267278.6] WARNING, no entry stored in dbm for [ENSG00000248973.3] WARNING, no entry stored in dbm for [ENSG00000281896.1] WARNING, no entry stored in dbm for [ENSG00000287586.1] WARNING, no entry stored in dbm for [ENSG00000274554.1] WARNING, no entry stored in dbm for [ENSG00000205746.9] WARNING, no entry stored in dbm for [ENSG00000206120.11] WARNING, no entry stored in dbm for [ENSG00000259416.2] WARNING, no entry stored in dbm for [ENSG00000251323.3] WARNING, no entry stored in dbm for [ENSG00000251129.2] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000251580.3] WARNING, no entry stored in dbm for [ENSG00000250754.6] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000256582.1] WARNING, no entry stored in dbm for [ENSG00000251632.1] WARNING, no entry stored in dbm for [ENSG00000251026.2] WARNING, no entry stored in dbm for [ENSG00000233448.2] WARNING, no entry stored in dbm for [ENSG00000249797.2] WARNING, no entry stored in dbm for [ENSG00000248693.1] WARNING, no entry stored in dbm for [ENSG00000241131.2] WARNING, no entry stored in dbm for [ENSG00000234663.7] WARNING, no entry stored in dbm for [ENSG00000234663.7] WARNING, no entry stored in dbm for [ENSG00000279579.3] WARNING, no entry stored in dbm for [ENSG00000214900.11] WARNING, no entry stored in dbm for [ENSG00000246223.9] WARNING, no entry stored in dbm for [ENSG00000233901.6] WARNING, no entry stored in dbm for [ENSG00000237339.5] WARNING, no entry stored in dbm for [ENSG00000255171.7] WARNING, no entry stored in dbm for [ENSG00000245937.8] WARNING, no entry stored in dbm for [ENSG00000281404.2] WARNING, no entry stored in dbm for [ENSG00000228393.4] WARNING, no entry stored in dbm for [ENSG00000235687.9] WARNING, no entry stored in dbm for [ENSG00000227745.1] WARNING, no entry stored in dbm for [ENSG00000247982.6] WARNING, no entry stored in dbm for [ENSG00000233058.2] WARNING, no entry stored in dbm for [ENSG00000245164.8] WARNING, no entry stored in dbm for [ENSG00000232170.6] WARNING, no entry stored in dbm for [ENSG00000215190.9] WARNING, no entry stored in dbm for [ENSG00000275374.1] WARNING, no entry stored in dbm for [ENSG00000237854.3] WARNING, no entry stored in dbm for [ENSG00000233237.8] WARNING, no entry stored in dbm for [ENSG00000235532.1] WARNING, no entry stored in dbm for [ENSG00000188185.13] WARNING, no entry stored in dbm for [ENSG00000231329.8] WARNING, no entry stored in dbm for [ENSG00000259974.3] WARNING, no entry stored in dbm for [ENSG00000231721.7] WARNING, no entry stored in dbm for [ENSG00000237854.3] WARNING, no entry stored in dbm for [ENSG00000200156.1] WARNING, no entry stored in dbm for [ENSG00000199568.1] WARNING, no entry stored in dbm for [ENSG00000233930.4] WARNING, no entry stored in dbm for [ENSG00000286948.1] WARNING, no entry stored in dbm for [ENSG00000266820.1] WARNING, no entry stored in dbm for [ENSG00000276715.4] WARNING, no entry stored in dbm for [ENSG00000224078.15] WARNING, no entry stored in dbm for [ENSG00000250686.2] WARNING, no entry stored in dbm for [ENSG00000261442.1] WARNING, no entry stored in dbm for [ENSG00000256616.3] WARNING, no entry stored in dbm for [ENSG00000259673.6] WARNING, no entry stored in dbm for [ENSG00000259673.6] WARNING, no entry stored in dbm for [ENSG00000254034.2] WARNING, no entry stored in dbm for [ENSG00000204117.2] WARNING, no entry stored in dbm for [ENSG00000286675.1] WARNING, no entry stored in dbm for [ENSG00000286675.1] WARNING, no entry stored in dbm for [ENSG00000203650.9] WARNING, no entry stored in dbm for [ENSG00000272848.2] WARNING, no entry stored in dbm for [ENSG00000255733.6] WARNING, no entry stored in dbm for [ENSG00000213430.6] WARNING, no entry stored in dbm for [ENSG00000235864.1] WARNING, no entry stored in dbm for [ENSG00000248441.7] WARNING, no entry stored in dbm for [ENSG00000213300.5] WARNING, no entry stored in dbm for [ENSG00000248977.1] WARNING, no entry stored in dbm for [ENSG00000267233.1] WARNING, no entry stored in dbm for [ENSG00000230280.2] WARNING, no entry stored in dbm for [ENSG00000241120.1] WARNING, no entry stored in dbm for [ENSG00000239718.1] WARNING, no entry stored in dbm for [ENSG00000180229.12] WARNING, no entry stored in dbm for [ENSG00000274471.2] WARNING, no entry stored in dbm for [ENSG00000276550.4] WARNING, no entry stored in dbm for [ENSG00000268858.2] WARNING, no entry stored in dbm for [ENSG00000183666.17] WARNING, no entry stored in dbm for [ENSG00000234945.8] WARNING, no entry stored in dbm for [ENSG00000228081.2] WARNING, no entry stored in dbm for [ENSG00000276550.4] WARNING, no entry stored in dbm for [ENSG00000260693.1] WARNING, no entry stored in dbm for [ENSG00000254610.3] WARNING, no entry stored in dbm for [ENSG00000241621.1] WARNING, no entry stored in dbm for [ENSG00000247363.2] WARNING, no entry stored in dbm for [ENSG00000250903.9] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000196295.12] WARNING, no entry stored in dbm for [ENSG00000196295.12] WARNING, no entry stored in dbm for [ENSG00000223612.3] WARNING, no entry stored in dbm for [ENSG00000216624.3] WARNING, no entry stored in dbm for [ENSG00000228775.8] WARNING, no entry stored in dbm for [ENSG00000250878.3] WARNING, no entry stored in dbm for [ENSG00000223745.8] WARNING, no entry stored in dbm for [ENSG00000231527.7] WARNING, no entry stored in dbm for [ENSG00000237840.6] WARNING, no entry stored in dbm for [ENSG00000249353.2] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000272153.1] WARNING, no entry stored in dbm for [ENSG00000185684.15] WARNING, no entry stored in dbm for [ENSG00000277526.5] WARNING, no entry stored in dbm for [ENSG00000255441.1] WARNING, no entry stored in dbm for [ENSG00000236810.6] WARNING, no entry stored in dbm for [ENSG00000184991.3] WARNING, no entry stored in dbm for [ENSG00000254111.3] WARNING, no entry stored in dbm for [ENSG00000248994.2] WARNING, no entry stored in dbm for [ENSG00000275374.1] WARNING, no entry stored in dbm for [ENSG00000266181.1] WARNING, no entry stored in dbm for [ENSG00000186704.9] WARNING, no entry stored in dbm for [ENSG00000214961.2] WARNING, no entry stored in dbm for [ENSG00000287400.1] WARNING, no entry stored in dbm for [ENSG00000271235.1] WARNING, no entry stored in dbm for [ENSG00000288561.1] WARNING, no entry stored in dbm for [ENSG00000225286.1] WARNING, no entry stored in dbm for [ENSG00000200156.1] WARNING, no entry stored in dbm for [ENSG00000199568.1] WARNING, no entry stored in dbm for [ENSG00000254252.1] WARNING, no entry stored in dbm for [ENSG00000254275.6] WARNING, no entry stored in dbm for [ENSG00000230305.2] WARNING, no entry stored in dbm for [ENSG00000275374.1] WARNING, no entry stored in dbm for [ENSG00000214331.8] WARNING, no entry stored in dbm for [ENSG00000272153.1] WARNING, no entry stored in dbm for [ENSG00000204959.4] WARNING, no entry stored in dbm for [ENSG00000100058.12] WARNING, no entry stored in dbm for [ENSG00000287095.1] WARNING, no entry stored in dbm for [ENSG00000224509.2] WARNING, no entry stored in dbm for [ENSG00000248150.1] WARNING, no entry stored in dbm for [ENSG00000239883.8] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [ENSG00000230696.1] WARNING, no entry stored in dbm for [ENSG00000255121.2] WARNING, no entry stored in dbm for [ENSG00000237986.4] WARNING, no entry stored in dbm for [ENSG00000227632.2] WARNING, no entry stored in dbm for [ENSG00000223773.7] WARNING, no entry stored in dbm for [ENSG00000230063.1] WARNING, no entry stored in dbm for [ENSG00000180139.11] WARNING, no entry stored in dbm for [ENSG00000279044.1] WARNING, no entry stored in dbm for [ENSG00000287802.1] WARNING, no entry stored in dbm for [ENSG00000231156.1] WARNING, no entry stored in dbm for [ENSG00000267033.1] WARNING, no entry stored in dbm for [ENSG00000271821.1] WARNING, no entry stored in dbm for [ENSG00000233073.2] WARNING, no entry stored in dbm for [ENSG00000227742.2] WARNING, no entry stored in dbm for [ENSG00000246627.6] WARNING, no entry stored in dbm for [ENSG00000288596.2] WARNING, no entry stored in dbm for [ENSG00000257242.8] WARNING, no entry stored in dbm for [ENSG00000270025.2] WARNING, no entry stored in dbm for [ENSG00000243289.1] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000234420.7] WARNING, no entry stored in dbm for [ENSG00000247708.8] WARNING, no entry stored in dbm for [ENSG00000176826.15] WARNING, no entry stored in dbm for [ENSG00000255458.7] WARNING, no entry stored in dbm for [ENSG00000261102.2] WARNING, no entry stored in dbm for [ENSG00000228834.1] WARNING, no entry stored in dbm for [ENSG00000285106.2] WARNING, no entry stored in dbm for [ENSG00000244198.7] WARNING, no entry stored in dbm for [ENSG00000229520.1] WARNING, no entry stored in dbm for [ENSG00000231721.7] WARNING, no entry stored in dbm for [ENSG00000254678.1] WARNING, no entry stored in dbm for [ENSG00000256591.5] WARNING, no entry stored in dbm for [ENSG00000222042.2] WARNING, no entry stored in dbm for [ENSG00000264072.1] WARNING, no entry stored in dbm for [ENSG00000226771.1] WARNING, no entry stored in dbm for [ENSG00000267794.1] WARNING, no entry stored in dbm for [ENSG00000224431.1] WARNING, no entry stored in dbm for [ENSG00000224431.1] WARNING, no entry stored in dbm for [ENSG00000230006.7] WARNING, no entry stored in dbm for [ENSG00000231317.1] WARNING, no entry stored in dbm for [ENSG00000229180.7] WARNING, no entry stored in dbm for [ENSG00000260290.2] WARNING, no entry stored in dbm for [ENSG00000215067.10] WARNING, no entry stored in dbm for [ENSG00000263142.5] WARNING, no entry stored in dbm for [ENSG00000272630.1] WARNING, no entry stored in dbm for [ENSG00000228427.3] WARNING, no entry stored in dbm for [ENSG00000230175.1] WARNING, no entry stored in dbm for [ENSG00000225096.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000227619.3] WARNING, no entry stored in dbm for [ENSG00000285280.2] WARNING, no entry stored in dbm for [ENSG00000235020.5] WARNING, no entry stored in dbm for [ENSG00000232811.1] WARNING, no entry stored in dbm for [ENSG00000279149.1] WARNING, no entry stored in dbm for [ENSG00000286215.1] WARNING, no entry stored in dbm for [ENSG00000246203.2] WARNING, no entry stored in dbm for [ENSG00000165121.11] WARNING, no entry stored in dbm for [ENSG00000267369.1] WARNING, no entry stored in dbm for [ENSG00000258428.5] WARNING, no entry stored in dbm for [ENSG00000261060.1] WARNING, no entry stored in dbm for [ENSG00000237137.1] WARNING, no entry stored in dbm for [ENSG00000226842.1] WARNING, no entry stored in dbm for [ENSG00000259049.1] WARNING, no entry stored in dbm for [ENSG00000287428.1] WARNING, no entry stored in dbm for [ENSG00000273149.1] WARNING, no entry stored in dbm for [ENSG00000233183.3] WARNING, no entry stored in dbm for [ENSG00000242888.1] WARNING, no entry stored in dbm for [ENSG00000227220.1] WARNING, no entry stored in dbm for [ENSG00000236166.1] WARNING, no entry stored in dbm for [ENSG00000226578.1] WARNING, no entry stored in dbm for [ENSG00000280355.1] WARNING, no entry stored in dbm for [ENSG00000227486.2] WARNING, no entry stored in dbm for [ENSG00000259020.3] WARNING, no entry stored in dbm for [ENSG00000288543.1] WARNING, no entry stored in dbm for [ENSG00000288543.1] WARNING, no entry stored in dbm for [ENSG00000277301.1] WARNING, no entry stored in dbm for [ENSG00000277301.1] WARNING, no entry stored in dbm for [ENSG00000261798.1] WARNING, no entry stored in dbm for [ENSG00000260425.1] WARNING, no entry stored in dbm for [ENSG00000234869.1] WARNING, no entry stored in dbm for [ENSG00000198221.10] WARNING, no entry stored in dbm for [ENSG00000259485.2] WARNING, no entry stored in dbm for [ENSG00000236018.2] WARNING, no entry stored in dbm for [ENSG00000230417.12] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000176593.8] WARNING, no entry stored in dbm for [ENSG00000196295.12] WARNING, no entry stored in dbm for [ENSG00000240197.1] WARNING, no entry stored in dbm for [ENSG00000237017.1] WARNING, no entry stored in dbm for [ENSG00000284964.1] WARNING, no entry stored in dbm for [ENSG00000261499.2] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000246596.7] WARNING, no entry stored in dbm for [ENSG00000254701.3] WARNING, no entry stored in dbm for [ENSG00000267417.1] WARNING, no entry stored in dbm for [ENSG00000229930.1] WARNING, no entry stored in dbm for [ENSG00000267305.2] WARNING, no entry stored in dbm for [ENSG00000250842.1] WARNING, no entry stored in dbm for [ENSG00000278212.2] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000257252.6] WARNING, no entry stored in dbm for [ENSG00000268240.1] WARNING, no entry stored in dbm for [ENSG00000280117.1] WARNING, no entry stored in dbm for [ENSG00000285954.1] WARNING, no entry stored in dbm for [ENSG00000270911.1] WARNING, no entry stored in dbm for [ENSG00000228043.5] WARNING, no entry stored in dbm for [ENSG00000278791.1] WARNING, no entry stored in dbm for [ENSG00000278791.1] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000224610.1] WARNING, no entry stored in dbm for [ENSG00000288075.1] WARNING, no entry stored in dbm for [ENSG00000277332.1] WARNING, no entry stored in dbm for [ENSG00000251600.8] WARNING, no entry stored in dbm for [ENSG00000249684.6] WARNING, no entry stored in dbm for [ENSG00000245768.7] WARNING, no entry stored in dbm for [ENSG00000250159.7] WARNING, no entry stored in dbm for [ENSG00000255454.1] WARNING, no entry stored in dbm for [ENSG00000284734.1] WARNING, no entry stored in dbm for [ENSG00000287129.1] WARNING, no entry stored in dbm for [ENSG00000269937.1] WARNING, no entry stored in dbm for [ENSG00000285809.1] WARNING, no entry stored in dbm for [ENSG00000261226.1] WARNING, no entry stored in dbm for [ENSG00000243960.1] WARNING, no entry stored in dbm for [ENSG00000260290.2] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000239969.5] WARNING, no entry stored in dbm for [ENSG00000239969.5] WARNING, no entry stored in dbm for [ENSG00000239969.5] WARNING, no entry stored in dbm for [ENSG00000230305.2] WARNING, no entry stored in dbm for [ENSG00000267198.1] WARNING, no entry stored in dbm for [ENSG00000131484.4] WARNING, no entry stored in dbm for [ENSG00000259418.1] WARNING, no entry stored in dbm for [ENSG00000259363.6] WARNING, no entry stored in dbm for [ENSG00000259363.6] WARNING, no entry stored in dbm for [ENSG00000285731.1] WARNING, no entry stored in dbm for [ENSG00000280828.1] WARNING, no entry stored in dbm for [ENSG00000259542.5] WARNING, no entry stored in dbm for [ENSG00000259380.6] WARNING, no entry stored in dbm for [ENSG00000206976.1] WARNING, no entry stored in dbm for [ENSG00000242536.2] WARNING, no entry stored in dbm for [ENSG00000261501.1] WARNING, no entry stored in dbm for [ENSG00000230979.3] WARNING, no entry stored in dbm for [ENSG00000201031.1] WARNING, no entry stored in dbm for [ENSG00000230979.3] WARNING, no entry stored in dbm for [ENSG00000201098.1] WARNING, no entry stored in dbm for [ENSG00000239985.2] WARNING, no entry stored in dbm for [ENSG00000229212.8] WARNING, no entry stored in dbm for [ENSG00000260005.6] WARNING, no entry stored in dbm for [ENSG00000257817.2] WARNING, no entry stored in dbm for [ENSG00000188002.10] WARNING, no entry stored in dbm for [ENSG00000258732.1] WARNING, no entry stored in dbm for [ENSG00000251131.2] WARNING, no entry stored in dbm for [ENSG00000259429.5] WARNING, no entry stored in dbm for [ENSG00000255621.1] WARNING, no entry stored in dbm for [ENSG00000248115.1] WARNING, no entry stored in dbm for [ENSG00000254777.5] WARNING, no entry stored in dbm for [ENSG00000232377.1] WARNING, no entry stored in dbm for [ENSG00000269032.1] WARNING, no entry stored in dbm for [ENSG00000184319.16] WARNING, no entry stored in dbm for [ENSG00000261329.6] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000251405.3] WARNING, no entry stored in dbm for [ENSG00000259041.1] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000186148.13] WARNING, no entry stored in dbm for [ENSG00000271018.1] WARNING, no entry stored in dbm for [ENSG00000224237.1] WARNING, no entry stored in dbm for [ENSG00000225057.2] WARNING, no entry stored in dbm for [ENSG00000279277.2] WARNING, no entry stored in dbm for [ENSG00000278060.1] WARNING, no entry stored in dbm for [ENSG00000239470.3] WARNING, no entry stored in dbm for [ENSG00000260160.1] WARNING, no entry stored in dbm for [ENSG00000214248.2] WARNING, no entry stored in dbm for [ENSG00000229738.1] WARNING, no entry stored in dbm for [ENSG00000256594.8] WARNING, no entry stored in dbm for [ENSG00000111788.10] WARNING, no entry stored in dbm for [ENSG00000284649.1] WARNING, no entry stored in dbm for [ENSG00000180747.15] WARNING, no entry stored in dbm for [ENSG00000260788.6] WARNING, no entry stored in dbm for [ENSG00000214331.8] WARNING, no entry stored in dbm for [ENSG00000214331.8] WARNING, no entry stored in dbm for [ENSG00000214331.8] WARNING, no entry stored in dbm for [ENSG00000260979.1] WARNING, no entry stored in dbm for [ENSG00000176593.8] WARNING, no entry stored in dbm for [ENSG00000240388.2] WARNING, no entry stored in dbm for [ENSG00000257403.2] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000257403.2] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000269043.2] WARNING, no entry stored in dbm for [ENSG00000280007.1] WARNING, no entry stored in dbm for [ENSG00000283041.1] WARNING, no entry stored in dbm for [ENSG00000226472.8] WARNING, no entry stored in dbm for [ENSG00000269069.1] WARNING, no entry stored in dbm for [ENSG00000259663.2] WARNING, no entry stored in dbm for [ENSG00000238165.1] WARNING, no entry stored in dbm for [ENSG00000238041.3] WARNING, no entry stored in dbm for [ENSG00000238165.1] WARNING, no entry stored in dbm for [ENSG00000225728.2] WARNING, no entry stored in dbm for [ENSG00000255595.5] WARNING, no entry stored in dbm for [ENSG00000277458.1] WARNING, no entry stored in dbm for [ENSG00000277458.1] WARNING, no entry stored in dbm for [ENSG00000206129.4] WARNING, no entry stored in dbm for [ENSG00000269745.1] WARNING, no entry stored in dbm for [ENSG00000269745.1] WARNING, no entry stored in dbm for [ENSG00000236531.2] WARNING, no entry stored in dbm for [ENSG00000229180.7] WARNING, no entry stored in dbm for [ENSG00000230825.2] WARNING, no entry stored in dbm for [ENSG00000267421.6] WARNING, no entry stored in dbm for [ENSG00000205485.13] WARNING, no entry stored in dbm for [ENSG00000243554.1] WARNING, no entry stored in dbm for [ENSG00000241057.2] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000241057.2] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000230305.2] WARNING, no entry stored in dbm for [ENSG00000257433.6] WARNING, no entry stored in dbm for [ENSG00000187984.13] WARNING, no entry stored in dbm for [ENSG00000251595.7] WARNING, no entry stored in dbm for [ENSG00000251595.7] * STAR-Fusion complete. See output: /tmp/nxf.94ibH9L1T6/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)