File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4c/2e71204cb9fca088d41621046984be/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:21:42
                             Started mapping on |	Jun 08 10:28:06
                                    Finished on |	Jun 08 11:07:14
       Mapping speed, Million of reads per hour |	412.01

                          Number of input reads |	268723304
                      Average input read length |	233
                                    UNIQUE READS:
                   Uniquely mapped reads number |	257902849
                        Uniquely mapped reads % |	95.97%
                          Average mapped length |	232.40
                       Number of splices: Total |	256673991
            Number of splices: Annotated (sjdb) |	252639830
                       Number of splices: GT/AG |	253130823
                       Number of splices: GC/AG |	2051918
                       Number of splices: AT/AC |	203916
               Number of splices: Non-canonical |	1287334
                      Mismatch rate per base, % |	0.20%
                         Deletion rate per base |	0.03%
                        Deletion average length |	2.21
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.63
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	8473882
             % of reads mapped to multiple loci |	3.15%
        Number of reads mapped to too many loci |	264716
             % of reads mapped to too many loci |	0.10%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	1889743
                 % of reads unmapped: too short |	0.70%
                Number of reads unmapped: other |	192114
                     % of reads unmapped: other |	0.07%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%