File Info
- Filename
- aih-tih-sc-9703f5-R1_A23YTGFLT4_1.fusions.csv
- Full Path
- s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8d/f2acef8ebad4bef109e179f1c93982/aih-tih-sc-9703f5-R1_A23YTGFLT4_1.fusions.csv
- Size
- 3.2 KB
- Task
- NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (aih-tih-sc-9703f5-R1_A23YTGFLT4_1)
- Attempt
Content
View in new tab| Fusion | Databases | Score | Explained score | arriba | starfusion |
| PLEKHA7--NAV2 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr11:16841547#chr11:19832484,reading-frame: out-of-frame,type: inversion,split_reads1: 36,split_reads2: 17,discordant_mates: 0,coverage1: 330,coverage2: 566,confidence: high | position: chr11:16841547:-#chr11:19832484:+,junction_reads: 53,spanning_reads: 0,ffmp: 0.3146 | |
| YTHDF3--MPPED2 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr8:63187745#chr11:30536175,reading-frame: out-of-frame,type: translocation,split_reads1: 29,split_reads2: 10,discordant_mates: 0,coverage1: 1739,coverage2: 305,confidence: high | position: chr8:63187745:+#chr11:30536175:-,junction_reads: 40,spanning_reads: 0,ffmp: 0.2374 | |
| CPT1C--ZNF614 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr19:49706413#chr19:52025961,reading-frame: out-of-frame,type: inversion,split_reads1: 16,split_reads2: 1,discordant_mates: 0,coverage1: 339,coverage2: 9,confidence: high | position: chr19:49706413:+#chr19:52025961:-,junction_reads: 19,spanning_reads: 0,ffmp: 0.1128 | |
| ZNF83--CPT1C | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr19:52635066#chr19:49701317,reading-frame: in-frame,type: inversion,split_reads1: 7,split_reads2: 9,discordant_mates: 0,coverage1: 1059,coverage2: 535,confidence: high | position: chr19:52635066:-#chr19:49701317:+,junction_reads: 17,spanning_reads: 0,ffmp: 0.1009 | |
| ZNF714--MED25 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr19:21082348#chr19:49835727,reading-frame: .,type: deletion,split_reads1: 2,split_reads2: 6,discordant_mates: 0,coverage1: 92,coverage2: 4398,confidence: high | position: chr19:21082348:+#chr19:49835727:+,junction_reads: 14,spanning_reads: 0,ffmp: 0.0831 | |
| VDAC3--CHRNB3 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr8:42391928:+#chr8:42730594:+,junction_reads: 13,spanning_reads: 0,ffmp: 0.0772 | ||
| AC016831.6--SRBD1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr7:131052425:-#chr2:45419894:-,junction_reads: 10,spanning_reads: 0,ffmp: 0.0594 | ||
| ZNF71--IKBKB | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr19:56601591#chr8:42310568,reading-frame: out-of-frame,type: translocation/5'-5',split_reads1: 25,split_reads2: 13,discordant_mates: 0,coverage1: 712,coverage2: 33,confidence: high | ||
| STX16--NPEPL1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr20:58673711#chr20:58691724,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 12,split_reads2: 9,discordant_mates: 0,coverage1: 1051,coverage2: 176,confidence: high | ||
| ZNF71--AC021613.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr19:56601591#chr8:21180549,reading-frame: out-of-frame,type: translocation/5'-5',split_reads1: 10,split_reads2: 5,discordant_mates: 0,coverage1: 712,coverage2: 10,confidence: high | ||
| TVP23C--CDRT4 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr17:15503098#chr17:15440285,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 6,split_reads2: 8,discordant_mates: 0,coverage1: 358,coverage2: 73,confidence: high | |
| IKBKB--AC021613.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr8:42309025#chr8:21140808,reading-frame: out-of-frame,type: inversion,split_reads1: 6,split_reads2: 3,discordant_mates: 0,coverage1: 1909,coverage2: 4,confidence: high |
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