AIH curated blacklist: matched 13 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 417
Pass (FILTER=PASS): 46 (11.0%)
Fail (FILTER=FAIL): 371 (89.0%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 13
All 13 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 94
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 74
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 35
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 23
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 21
confidence_below_min(low<high): 21
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 17
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 7
confidence_below_min(medium<high);aih_curated_blacklist: 7
total_reads_below_min(5.0<8.0): 5
Breakdown by confidence:
high: 46 pass, 13 fail (total: 59)
low: 0 pass, 151 fail (total: 151)
medium: 0 pass, 207 fail (total: 207)
Arriba filter: 417 rows -> 46 PASS; wrote aih-tih-sc-fa55c3-R1_A23YTGFLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-fa55c3-R1_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-fa55c3-R1_A23YTGFLT4_1.arriba.fusions.filter_summary.txt