Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/14/a8a257f5873042bdfcb56d5940239f/aih-tih-sc-598a93-R1_A23YTGFLT4_1_2.fastp.fastq.gz
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/61/8412084494dd7c54e9e0be1e0ec8d9/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ce/62a18a95f01d4116d47bf700b27068/aih-tih-sc-598a93-R1_A23YTGFLT4_1.Chimeric.out.junction
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/61/8412084494dd7c54e9e0be1e0ec8d9/.command.run
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/14/a8a257f5873042bdfcb56d5940239f/aih-tih-sc-598a93-R1_A23YTGFLT4_1_1.fastp.fastq.gz
==> STAGING COMPLETE (6 inputs)
-ctat genome lib [/tmp/nxf.KPhK3n8ICE/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.KPhK3n8ICE/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary
-sample contains 60743285 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.KPhK3n8ICE/ctat_genome_lib_build_dir -J /tmp/nxf.KPhK3n8ICE/aih-tih-sc-598a93-R1_A23YTGFLT4_1.Chimeric.out.junction -O /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4
-parsing fusion evidence: /tmp/nxf.KPhK3n8ICE/aih-tih-sc-598a93-R1_A23YTGFLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.KPhK3n8ICE/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes
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[810000], rate=77142.86/min -building interval tree based on /tmp/nxf.KPhK3n8ICE/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes
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[800000], rate=74883.00/min -building interval tree based on /tmp/nxf.KPhK3n8ICE/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes
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[800000], rate=66298.34/min -building interval tree based on /tmp/nxf.KPhK3n8ICE/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes
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[800000], rate=63074.90/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.KPhK3n8ICE/ctat_genome_lib_build_dir --filt_file /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-parsing /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.
0.00 reads per min processed...
12000000.00 reads per min processed...
9000000.00 reads per min processed...
6000000.00 reads per min processed...
4285714.29 reads per min processed...
4000000.00 reads per min processed...
3818181.82 reads per min processed...
3692307.69 reads per min processed...
3600000.00 reads per min processed...
3333333.33 reads per min processed...
3142857.14 reads per min processed...
3000000.00 reads per min processed...
3000000.00 reads per min processed...
3000000.00 reads per min processed...
3000000.00 reads per min processed...
3000000.00 reads per min processed...
3000000.00 reads per min processed...
3085714.29 reads per min processed...
3166666.67 reads per min processed...
3157894.74 reads per min processed...
3150000.00 reads per min processed...
3142857.14 reads per min processed...
3136363.64 reads per min processed...
3130434.78 reads per min processed...
3061224.49 reads per min processed...
3058823.53 reads per min processed...
3000000.00 reads per min processed...
done.
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion
-parsing fusion evidence: /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.KPhK3n8ICE/aih-tih-sc-598a93-R1_A23YTGFLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.KPhK3n8ICE/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -83263.884319
EM: Round [1] log likelihood: -83162.913535
EM: Round [2] log likelihood: -83126.096788
EM: Round [3] log likelihood: -83109.436474
EM: Round [4] log likelihood: -83100.861522
EM: Round [5] log likelihood: -83096.139939
EM: Round [6] log likelihood: -83093.420829
EM: Round [7] log likelihood: -83091.790324
EM: Round [8] log likelihood: -83090.772142
EM: Round [9] log likelihood: -83090.110204
EM: Round [10] log likelihood: -83089.662940
EM: Round [11] log likelihood: -83089.349743
EM: Round [12] log likelihood: -83089.123268
EM: Round [13] log likelihood: -83088.954803
EM: Round [14] log likelihood: -83088.826370
EM: Round [15] log likelihood: -83088.726355
EM: Round [16] log likelihood: -83088.647030
EM: Round [17] log likelihood: -83088.583109
EM: Round [18] log likelihood: -83088.530883
EM: Round [19] log likelihood: -83088.487693
EM: Round [20] log likelihood: -83088.451592
EM: Round [21] log likelihood: -83088.421127
EM: Round [22] log likelihood: -83088.395200
EM: Round [23] log likelihood: -83088.372966
EM: Round [24] log likelihood: -83088.353768
EM: Round [25] log likelihood: -83088.337086
EM: Round [26] log likelihood: -83088.322509
EM: Round [27] log likelihood: -83088.309704
EM: Round [28] log likelihood: -83088.298401
EM: Round [29] log likelihood: -83088.288380
EM: Round [30] log likelihood: -83088.279458
EM: Round [31] log likelihood: -83088.271484
EM: Round [32] log likelihood: -83088.264331
EM: Round [33] log likelihood: -83088.257892
EM: Round [34] log likelihood: -83088.252077
EM: Round [35] log likelihood: -83088.246810
EM: Round [36] log likelihood: -83088.242024
EM: Round [37] log likelihood: -83088.237664
EM: Round [38] log likelihood: -83088.233680
EM: Round [39] log likelihood: -83088.230031
EM: Round [40] log likelihood: -83088.226681
EM: Round [41] log likelihood: -83088.223598
EM: Round [42] log likelihood: -83088.220754
EM: Round [43] log likelihood: -83088.218125
EM: Round [44] log likelihood: -83088.215689
EM: Round [45] log likelihood: -83088.213429
EM: Round [46] log likelihood: -83088.211327
EM: Round [47] log likelihood: -83088.209369
EM: Round [48] log likelihood: -83088.207542
EM: Round [49] log likelihood: -83088.205834
EM: Round [50] log likelihood: -83088.204235
EM: Round [51] log likelihood: -83088.202736
EM: Round [52] log likelihood: -83088.201329
EM: Round [53] log likelihood: -83088.200005
EM: Round [54] log likelihood: -83088.198760
EM: Round [55] log likelihood: -83088.197585
EM: Round [56] log likelihood: -83088.196477
EM: Round [57] log likelihood: -83088.195429
EM: Round [58] log likelihood: -83088.194438
EM: Round [59] log likelihood: -83088.193500
EM: Round [60] log likelihood: -83088.192610
EM: Round [61] log likelihood: -83088.191766
EM: Round [62] log likelihood: -83088.190964
EM: Round [63] log likelihood: -83088.190201
EM: Round [64] log likelihood: -83088.189475
EM: Round [65] log likelihood: -83088.188784
EM: Round [66] log likelihood: -83088.188125
EM: Round [67] log likelihood: -83088.187496
EM: Round [68] log likelihood: -83088.186895
EM: Round [69] log likelihood: -83088.186321
EM: Round [70] log likelihood: -83088.185772
EM: Round [71] log likelihood: -83088.185246
EM: Round [72] log likelihood: -83088.184742
EM: Round [73] log likelihood: -83088.184259
EM: Round [74] log likelihood: -83088.183796
EM: Round [75] log likelihood: -83088.183351
EM: Round [76] log likelihood: -83088.182924
EM: Round [77] log likelihood: -83088.182513
EM: Round [78] log likelihood: -83088.182118
EM: Round [79] log likelihood: -83088.181738
EM: Round [80] log likelihood: -83088.181372
EM: Round [81] log likelihood: -83088.181019
EM: Round [82] log likelihood: -83088.180679
EM: Round [83] log likelihood: -83088.180350
EM: Round [84] log likelihood: -83088.180033
EM: Round [85] log likelihood: -83088.179727
EM: Round [86] log likelihood: -83088.179432
EM: Round [87] log likelihood: -83088.179146
EM: Round [88] log likelihood: -83088.178869
EM: Round [89] log likelihood: -83088.178602
EM: Round [90] log likelihood: -83088.178343
EM: Round [91] log likelihood: -83088.178092
EM: Round [92] log likelihood: -83088.177849
EM: Round [93] log likelihood: -83088.177613
EM: Round [94] log likelihood: -83088.177385
EM: Round [95] log likelihood: -83088.177163
EM: Round [96] log likelihood: -83088.176948
EM: Round [97] log likelihood: -83088.176739
EM: Round [98] log likelihood: -83088.176536
EM: Round [99] log likelihood: -83088.176339
EM: Round [100] log likelihood: -83088.176148
EM: Round [101] log likelihood: -83088.175962
EM: Round [102] log likelihood: -83088.175781
EM: Round [103] log likelihood: -83088.175604
EM: Round [104] log likelihood: -83088.175433
EM: Round [105] log likelihood: -83088.175266
EM: Round [106] log likelihood: -83088.175104
EM: Round [107] log likelihood: -83088.174946
EM: Round [108] log likelihood: -83088.174792
EM: Round [109] log likelihood: -83088.174642
EM: Round [110] log likelihood: -83088.174496
EM: Round [111] log likelihood: -83088.174353
EM: Round [112] log likelihood: -83088.174215
EM: Round [113] log likelihood: -83088.174079
EM: Round [114] log likelihood: -83088.173947
EM: Round [115] log likelihood: -83088.173818
EM: Round [116] log likelihood: -83088.173693
EM: Round [117] log likelihood: -83088.173570
EM: Round [118] log likelihood: -83088.173450
EM: Round [119] log likelihood: -83088.173334
EM: Round [120] log likelihood: -83088.173220
EM: Round [121] log likelihood: -83088.173108
EM: Round [122] log likelihood: -83088.172999
EM: Round [123] log likelihood: -83088.172893
EM: Round [124] log likelihood: -83088.172790
EM: Round [125] log likelihood: -83088.172688
EM: Round [126] log likelihood: -83088.172589
EM: Stopping iterations at round 126 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -83231.668669
EM: Round [1] log likelihood: -83141.689233
EM: Round [2] log likelihood: -83109.767924
EM: Round [3] log likelihood: -83095.539374
EM: Round [4] log likelihood: -83088.309884
EM: Round [5] log likelihood: -83084.377255
EM: Round [6] log likelihood: -83082.138878
EM: Round [7] log likelihood: -83080.811384
EM: Round [8] log likelihood: -83079.990752
EM: Round [9] log likelihood: -83079.462135
EM: Round [10] log likelihood: -83079.108054
EM: Round [11] log likelihood: -83078.862299
EM: Round [12] log likelihood: -83078.686307
EM: Round [13] log likelihood: -83078.556830
EM: Round [14] log likelihood: -83078.459362
EM: Round [15] log likelihood: -83078.384541
EM: Round [16] log likelihood: -83078.326136
EM: Round [17] log likelihood: -83078.279878
EM: Round [18] log likelihood: -83078.242773
EM: Round [19] log likelihood: -83078.212670
EM: Round [20] log likelihood: -83078.187998
EM: Round [21] log likelihood: -83078.167588
EM: Round [22] log likelihood: -83078.150559
EM: Round [23] log likelihood: -83078.136240
EM: Round [24] log likelihood: -83078.124110
EM: Round [25] log likelihood: -83078.113766
EM: Round [26] log likelihood: -83078.104887
EM: Round [27] log likelihood: -83078.097220
EM: Round [28] log likelihood: -83078.090563
EM: Round [29] log likelihood: -83078.084752
EM: Round [30] log likelihood: -83078.079654
EM: Round [31] log likelihood: -83078.075161
EM: Round [32] log likelihood: -83078.071183
EM: Round [33] log likelihood: -83078.067646
EM: Round [34] log likelihood: -83078.064489
EM: Round [35] log likelihood: -83078.061660
EM: Round [36] log likelihood: -83078.059117
EM: Round [37] log likelihood: -83078.056822
EM: Round [38] log likelihood: -83078.054745
EM: Round [39] log likelihood: -83078.052860
EM: Round [40] log likelihood: -83078.051143
EM: Round [41] log likelihood: -83078.049576
EM: Round [42] log likelihood: -83078.048142
EM: Round [43] log likelihood: -83078.046826
EM: Round [44] log likelihood: -83078.045615
EM: Round [45] log likelihood: -83078.044499
EM: Round [46] log likelihood: -83078.043468
EM: Round [47] log likelihood: -83078.042513
EM: Round [48] log likelihood: -83078.041627
EM: Round [49] log likelihood: -83078.040804
EM: Round [50] log likelihood: -83078.040037
EM: Round [51] log likelihood: -83078.039321
EM: Round [52] log likelihood: -83078.038653
EM: Round [53] log likelihood: -83078.038027
EM: Round [54] log likelihood: -83078.037439
EM: Round [55] log likelihood: -83078.036888
EM: Round [56] log likelihood: -83078.036369
EM: Round [57] log likelihood: -83078.035880
EM: Round [58] log likelihood: -83078.035419
EM: Round [59] log likelihood: -83078.034983
EM: Round [60] log likelihood: -83078.034570
EM: Round [61] log likelihood: -83078.034179
EM: Round [62] log likelihood: -83078.033808
EM: Round [63] log likelihood: -83078.033455
EM: Round [64] log likelihood: -83078.033119
EM: Round [65] log likelihood: -83078.032799
EM: Round [66] log likelihood: -83078.032494
EM: Round [67] log likelihood: -83078.032203
EM: Round [68] log likelihood: -83078.031925
EM: Round [69] log likelihood: -83078.031658
EM: Round [70] log likelihood: -83078.031403
EM: Round [71] log likelihood: -83078.031158
EM: Round [72] log likelihood: -83078.030922
EM: Round [73] log likelihood: -83078.030696
EM: Round [74] log likelihood: -83078.030478
EM: Round [75] log likelihood: -83078.030269
EM: Round [76] log likelihood: -83078.030067
EM: Round [77] log likelihood: -83078.029872
EM: Round [78] log likelihood: -83078.029684
EM: Round [79] log likelihood: -83078.029502
EM: Round [80] log likelihood: -83078.029326
EM: Round [81] log likelihood: -83078.029156
EM: Round [82] log likelihood: -83078.028991
EM: Round [83] log likelihood: -83078.028832
EM: Round [84] log likelihood: -83078.028677
EM: Round [85] log likelihood: -83078.028527
EM: Round [86] log likelihood: -83078.028381
EM: Round [87] log likelihood: -83078.028239
EM: Round [88] log likelihood: -83078.028102
EM: Round [89] log likelihood: -83078.027968
EM: Round [90] log likelihood: -83078.027838
EM: Round [91] log likelihood: -83078.027711
EM: Round [92] log likelihood: -83078.027587
EM: Round [93] log likelihood: -83078.027467
EM: Round [94] log likelihood: -83078.027350
EM: Round [95] log likelihood: -83078.027236
EM: Round [96] log likelihood: -83078.027125
EM: Round [97] log likelihood: -83078.027016
EM: Round [98] log likelihood: -83078.026910
EM: Round [99] log likelihood: -83078.026806
EM: Round [100] log likelihood: -83078.026705
EM: Round [101] log likelihood: -83078.026607
EM: Stopping iterations at round 101 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.KPhK3n8ICE/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.KPhK3n8ICE/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.KPhK3n8ICE/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20
CMD: cp /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 60743285 > /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.KPhK3n8ICE/ctat_genome_lib_build_dir > /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.KPhK3n8ICE/ctat_genome_lib_build_dir --annotate /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.KPhK3n8ICE/ctat_genome_lib_build_dir
-done, see /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.KPhK3n8ICE/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 699, filtered: 5443)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.KPhK3n8ICE/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.KPhK3n8ICE/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000237296.9]
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WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000259555.1]
WARNING, no entry stored in dbm for [ENSG00000280331.1]
WARNING, no entry stored in dbm for [ENSG00000251131.2]
WARNING, no entry stored in dbm for [ENSG00000259429.5]
WARNING, no entry stored in dbm for [ENSG00000214883.4]
WARNING, no entry stored in dbm for [ENSG00000273674.5]
WARNING, no entry stored in dbm for [ENSG00000284711.1]
WARNING, no entry stored in dbm for [ENSG00000230073.1]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000271699.5]
WARNING, no entry stored in dbm for [ENSG00000267191.2]
WARNING, no entry stored in dbm for [ENSG00000266869.2]
WARNING, no entry stored in dbm for [ENSG00000283538.3]
WARNING, no entry stored in dbm for [ENSG00000268565.1]
WARNING, no entry stored in dbm for [ENSG00000278920.1]
WARNING, no entry stored in dbm for [ENSG00000253966.1]
* STAR-Fusion complete. See output: /tmp/nxf.KPhK3n8ICE/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)