File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ac/33672a043775c746e8a939a3255517/.command.log
Size
1.1 KB
Attempt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/30/cb43911c7e9fed9bcf45d5c1b5357e/aih-tih-sc-24ecfe-R1_A23YTGFLT4_1.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ac/33672a043775c746e8a939a3255517/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ac/33672a043775c746e8a939a3255517/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/27/b3ea3937e7b056c3cb353030ced667/aih-tih-sc-24ecfe-R1_A23YTGFLT4_1
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: aih-tih-sc-24ecfe-R1_A23YTGFLT4_1/abundance.h5
Successfully converted aih-tih-sc-24ecfe-R1_A23YTGFLT4_1/abundance.h5 to aih-tih-sc-24ecfe-R1_A23YTGFLT4_1_kallisto_mqc.tsv
  Sample: aih-tih-sc-24ecfe-R1_A23YTGFLT4_1
  Mean Fragment Length: 95.5 bp
  Median Fragment Length: 91.0 bp
  pct_mito_est_counts: 0.036%
  pct_ribo_est_counts: 0.701%
  pct_hk_est_counts: 0.558%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.07%
  pct_ribo_tpm: 2.038%
  pct_hk_tpm: 0.813%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 5.072%