Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/47/c5643fa7f81cd0ecf8198fa965c624/aih-tih-sc-377071-R1_A23YTGFLT4_1.Chimeric.out.junction
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a6/4a7c7d4e85efc225ebabaf5fe2f65c/aih-tih-sc-377071-R1_A23YTGFLT4_1_2.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a7/0efc2f153ad056e9cbcc04b1e8b765/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a6/4a7c7d4e85efc225ebabaf5fe2f65c/aih-tih-sc-377071-R1_A23YTGFLT4_1_1.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a7/0efc2f153ad056e9cbcc04b1e8b765/.command.run
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.PIzTXzsDjx/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.PIzTXzsDjx/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary
-sample contains 296584083 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.PIzTXzsDjx/ctat_genome_lib_build_dir  -J /tmp/nxf.PIzTXzsDjx/aih-tih-sc-377071-R1_A23YTGFLT4_1.Chimeric.out.junction  -O /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.PIzTXzsDjx/aih-tih-sc-377071-R1_A23YTGFLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.PIzTXzsDjx/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.13 min).
-mapping reads to genes

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[2310000], rate=51068.53/min -building interval tree based on /tmp/nxf.PIzTXzsDjx/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.13 min).
-mapping reads to genes

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[2300000], rate=48918.82/min -building interval tree based on /tmp/nxf.PIzTXzsDjx/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.13 min).
-mapping reads to genes

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[2300000], rate=46324.27/min 
[2310000], rate=46432.16/min -building interval tree based on /tmp/nxf.PIzTXzsDjx/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.13 min).
-mapping reads to genes

[10000], rate=27272.73/min 
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[2300000], rate=35946.86/min 
[2310000], rate=36000.00/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.PIzTXzsDjx/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 0.00 reads per min processed...  
 12000000.00 reads per min processed...  
 18000000.00 reads per min processed...  
 12000000.00 reads per min processed...  
 7500000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 5250000.00 reads per min processed...  
 5333333.33 reads per min processed...  
 4909090.91 reads per min processed...  
 5000000.00 reads per min processed...  
 4714285.71 reads per min processed...  
 4800000.00 reads per min processed...  
 4588235.29 reads per min processed...  
 4666666.67 reads per min processed...  
 4500000.00 reads per min processed...  
 4571428.57 reads per min processed...  
 4434782.61 reads per min processed...  
 4320000.00 reads per min processed...  
 4384615.38 reads per min processed...  
 4285714.29 reads per min processed...  
 4200000.00 reads per min processed...  
 4258064.52 reads per min processed...  
 4181818.18 reads per min processed...  
 4114285.71 reads per min processed...  
 4166666.67 reads per min processed...  
 4105263.16 reads per min processed...  
 4050000.00 reads per min processed...  
 4097560.98 reads per min processed...  
 4046511.63 reads per min processed...  
 4000000.00 reads per min processed...  
 4043478.26 reads per min processed...  
 4000000.00 reads per min processed...  
 4040816.33 reads per min processed...  
 4080000.00 reads per min processed...  
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 4075471.70 reads per min processed...  
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 4071428.57 reads per min processed...  
 4105263.16 reads per min processed...  
 4067796.61 reads per min processed...  
 4100000.00 reads per min processed...  
 4064516.13 reads per min processed...  
 4161290.32 reads per min processed...  
 4190476.19 reads per min processed...  
 4285714.29 reads per min processed...  
 4312500.00 reads per min processed...  
 4272727.27 reads per min processed...  
 4298507.46 reads per min processed...  
 4323529.41 reads per min processed...  
 4285714.29 reads per min processed...  
 4309859.15 reads per min processed...  
 4273972.60 reads per min processed...  
 4297297.30 reads per min processed...  
 4320000.00 reads per min processed...  
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 4307692.31 reads per min processed...  
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 4296296.30 reads per min processed...  
 4317073.17 reads per min processed...  
 4285714.29 reads per min processed...  
 4305882.35 reads per min processed...  
 4275862.07 reads per min processed...  
 4295454.55 reads per min processed...  
 4266666.67 reads per min processed...  
 4285714.29 reads per min processed...  
 4304347.83 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.PIzTXzsDjx/aih-tih-sc-377071-R1_A23YTGFLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.PIzTXzsDjx/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -2278963.948564
EM: Round [1] log likelihood: -2278306.528310
EM: Round [2] log likelihood: -2278091.761914
EM: Round [3] log likelihood: -2277991.781722
EM: Round [4] log likelihood: -2277938.821006
EM: Round [5] log likelihood: -2277908.477822
EM: Round [6] log likelihood: -2277889.974722
EM: Round [7] log likelihood: -2277878.032440
EM: Round [8] log likelihood: -2277869.907496
EM: Round [9] log likelihood: -2277864.112368
EM: Round [10] log likelihood: -2277859.808522
EM: Round [11] log likelihood: -2277856.503752
EM: Round [12] log likelihood: -2277853.896599
EM: Round [13] log likelihood: -2277851.794398
EM: Round [14] log likelihood: -2277850.068948
EM: Round [15] log likelihood: -2277848.631777
EM: Round [16] log likelihood: -2277847.419865
EM: Round [17] log likelihood: -2277846.387090
EM: Round [18] log likelihood: -2277845.498909
EM: Round [19] log likelihood: -2277844.728946
EM: Round [20] log likelihood: -2277844.056720
EM: Round [21] log likelihood: -2277843.466096
EM: Round [22] log likelihood: -2277842.944205
EM: Round [23] log likelihood: -2277842.480662
EM: Round [24] log likelihood: -2277842.067004
EM: Round [25] log likelihood: -2277841.696272
EM: Round [26] log likelihood: -2277841.362694
EM: Round [27] log likelihood: -2277841.061448
EM: Round [28] log likelihood: -2277840.788475
EM: Round [29] log likelihood: -2277840.540339
EM: Round [30] log likelihood: -2277840.314111
EM: Round [31] log likelihood: -2277840.107285
EM: Round [32] log likelihood: -2277839.917700
EM: Round [33] log likelihood: -2277839.743490
EM: Round [34] log likelihood: -2277839.583030
EM: Round [35] log likelihood: -2277839.434905
EM: Round [36] log likelihood: -2277839.297876
EM: Round [37] log likelihood: -2277839.170854
EM: Round [38] log likelihood: -2277839.052878
EM: Round [39] log likelihood: -2277838.943099
EM: Round [40] log likelihood: -2277838.840764
EM: Round [41] log likelihood: -2277838.745203
EM: Round [42] log likelihood: -2277838.655820
EM: Round [43] log likelihood: -2277838.572081
EM: Round [44] log likelihood: -2277838.493508
EM: Round [45] log likelihood: -2277838.419672
EM: Round [46] log likelihood: -2277838.350187
EM: Round [47] log likelihood: -2277838.284706
EM: Round [48] log likelihood: -2277838.222914
EM: Round [49] log likelihood: -2277838.164528
EM: Round [50] log likelihood: -2277838.109290
EM: Round [51] log likelihood: -2277838.056966
EM: Round [52] log likelihood: -2277838.007345
EM: Round [53] log likelihood: -2277837.960232
EM: Round [54] log likelihood: -2277837.915451
EM: Round [55] log likelihood: -2277837.872841
EM: Round [56] log likelihood: -2277837.832256
EM: Round [57] log likelihood: -2277837.793559
EM: Round [58] log likelihood: -2277837.756627
EM: Round [59] log likelihood: -2277837.721346
EM: Round [60] log likelihood: -2277837.687613
EM: Round [61] log likelihood: -2277837.655330
EM: Round [62] log likelihood: -2277837.624409
EM: Round [63] log likelihood: -2277837.594768
EM: Round [64] log likelihood: -2277837.566332
EM: Round [65] log likelihood: -2277837.539031
EM: Round [66] log likelihood: -2277837.512799
EM: Round [67] log likelihood: -2277837.487577
EM: Round [68] log likelihood: -2277837.463308
EM: Round [69] log likelihood: -2277837.439942
EM: Round [70] log likelihood: -2277837.417430
EM: Round [71] log likelihood: -2277837.395727
EM: Round [72] log likelihood: -2277837.374791
EM: Round [73] log likelihood: -2277837.354583
EM: Round [74] log likelihood: -2277837.335068
EM: Round [75] log likelihood: -2277837.316210
EM: Round [76] log likelihood: -2277837.297978
EM: Round [77] log likelihood: -2277837.280342
EM: Round [78] log likelihood: -2277837.263275
EM: Round [79] log likelihood: -2277837.246749
EM: Round [80] log likelihood: -2277837.230741
EM: Round [81] log likelihood: -2277837.215228
EM: Round [82] log likelihood: -2277837.200187
EM: Round [83] log likelihood: -2277837.185598
EM: Round [84] log likelihood: -2277837.171442
EM: Round [85] log likelihood: -2277837.157700
EM: Round [86] log likelihood: -2277837.144357
EM: Round [87] log likelihood: -2277837.131394
EM: Round [88] log likelihood: -2277837.118798
EM: Round [89] log likelihood: -2277837.106553
EM: Round [90] log likelihood: -2277837.094646
EM: Round [91] log likelihood: -2277837.083064
EM: Round [92] log likelihood: -2277837.071794
EM: Round [93] log likelihood: -2277837.060826
EM: Round [94] log likelihood: -2277837.050148
EM: Round [95] log likelihood: -2277837.039749
EM: Round [96] log likelihood: -2277837.029619
EM: Round [97] log likelihood: -2277837.019749
EM: Round [98] log likelihood: -2277837.010131
EM: Round [99] log likelihood: -2277837.000754
EM: Round [100] log likelihood: -2277836.991612
EM: Round [101] log likelihood: -2277836.982696
EM: Round [102] log likelihood: -2277836.973999
EM: Round [103] log likelihood: -2277836.965513
EM: Round [104] log likelihood: -2277836.957232
EM: Round [105] log likelihood: -2277836.949150
EM: Round [106] log likelihood: -2277836.941260
EM: Round [107] log likelihood: -2277836.933556
EM: Round [108] log likelihood: -2277836.926033
EM: Round [109] log likelihood: -2277836.918684
EM: Round [110] log likelihood: -2277836.911506
EM: Round [111] log likelihood: -2277836.904492
EM: Round [112] log likelihood: -2277836.897638
EM: Round [113] log likelihood: -2277836.890940
EM: Round [114] log likelihood: -2277836.884392
EM: Round [115] log likelihood: -2277836.877991
EM: Round [116] log likelihood: -2277836.871732
EM: Round [117] log likelihood: -2277836.865611
EM: Round [118] log likelihood: -2277836.859626
EM: Round [119] log likelihood: -2277836.853771
EM: Round [120] log likelihood: -2277836.848044
EM: Round [121] log likelihood: -2277836.842441
EM: Round [122] log likelihood: -2277836.836958
EM: Round [123] log likelihood: -2277836.831594
EM: Round [124] log likelihood: -2277836.826343
EM: Round [125] log likelihood: -2277836.821205
EM: Round [126] log likelihood: -2277836.816174
EM: Round [127] log likelihood: -2277836.811250
EM: Round [128] log likelihood: -2277836.806429
EM: Round [129] log likelihood: -2277836.801709
EM: Round [130] log likelihood: -2277836.797087
EM: Round [131] log likelihood: -2277836.792560
EM: Round [132] log likelihood: -2277836.788127
EM: Round [133] log likelihood: -2277836.783785
EM: Round [134] log likelihood: -2277836.779532
EM: Round [135] log likelihood: -2277836.775366
EM: Round [136] log likelihood: -2277836.771285
EM: Round [137] log likelihood: -2277836.767286
EM: Round [138] log likelihood: -2277836.763368
EM: Round [139] log likelihood: -2277836.759528
EM: Round [140] log likelihood: -2277836.755766
EM: Round [141] log likelihood: -2277836.752079
EM: Round [142] log likelihood: -2277836.748466
EM: Round [143] log likelihood: -2277836.744924
EM: Round [144] log likelihood: -2277836.741453
EM: Round [145] log likelihood: -2277836.738050
EM: Round [146] log likelihood: -2277836.734714
EM: Round [147] log likelihood: -2277836.731444
EM: Round [148] log likelihood: -2277836.728238
EM: Round [149] log likelihood: -2277836.725095
EM: Round [150] log likelihood: -2277836.722013
EM: Round [151] log likelihood: -2277836.718991
EM: Round [152] log likelihood: -2277836.716027
EM: Round [153] log likelihood: -2277836.713121
EM: Round [154] log likelihood: -2277836.710271
EM: Round [155] log likelihood: -2277836.707476
EM: Round [156] log likelihood: -2277836.704735
EM: Round [157] log likelihood: -2277836.702046
EM: Round [158] log likelihood: -2277836.699409
EM: Round [159] log likelihood: -2277836.696822
EM: Round [160] log likelihood: -2277836.694285
EM: Round [161] log likelihood: -2277836.691795
EM: Round [162] log likelihood: -2277836.689353
EM: Round [163] log likelihood: -2277836.686958
EM: Round [164] log likelihood: -2277836.684607
EM: Round [165] log likelihood: -2277836.682301
EM: Round [166] log likelihood: -2277836.680038
EM: Round [167] log likelihood: -2277836.677818
EM: Round [168] log likelihood: -2277836.675640
EM: Round [169] log likelihood: -2277836.673502
EM: Round [170] log likelihood: -2277836.671405
EM: Round [171] log likelihood: -2277836.669346
EM: Round [172] log likelihood: -2277836.667326
EM: Round [173] log likelihood: -2277836.665344
EM: Round [174] log likelihood: -2277836.663398
EM: Round [175] log likelihood: -2277836.661488
EM: Round [176] log likelihood: -2277836.659614
EM: Round [177] log likelihood: -2277836.657775
EM: Round [178] log likelihood: -2277836.655969
EM: Round [179] log likelihood: -2277836.654197
EM: Round [180] log likelihood: -2277836.652457
EM: Round [181] log likelihood: -2277836.650750
EM: Round [182] log likelihood: -2277836.649074
EM: Round [183] log likelihood: -2277836.647428
EM: Round [184] log likelihood: -2277836.645813
EM: Round [185] log likelihood: -2277836.644227
EM: Round [186] log likelihood: -2277836.642670
EM: Round [187] log likelihood: -2277836.641141
EM: Round [188] log likelihood: -2277836.639641
EM: Round [189] log likelihood: -2277836.638167
EM: Round [190] log likelihood: -2277836.636721
EM: Round [191] log likelihood: -2277836.635300
EM: Round [192] log likelihood: -2277836.633906
EM: Round [193] log likelihood: -2277836.632536
EM: Round [194] log likelihood: -2277836.631192
EM: Round [195] log likelihood: -2277836.629871
EM: Round [196] log likelihood: -2277836.628575
EM: Round [197] log likelihood: -2277836.627302
EM: Round [198] log likelihood: -2277836.626051
EM: Round [199] log likelihood: -2277836.624823
EM: Round [200] log likelihood: -2277836.623618
EM: Round [201] log likelihood: -2277836.622434
EM: Round [202] log likelihood: -2277836.621271
EM: Round [203] log likelihood: -2277836.620129
EM: Round [204] log likelihood: -2277836.619007
EM: Round [205] log likelihood: -2277836.617906
EM: Round [206] log likelihood: -2277836.616824
EM: Round [207] log likelihood: -2277836.615761
EM: Round [208] log likelihood: -2277836.614717
EM: Round [209] log likelihood: -2277836.613692
EM: Round [210] log likelihood: -2277836.612685
EM: Round [211] log likelihood: -2277836.611696
EM: Round [212] log likelihood: -2277836.610725
EM: Round [213] log likelihood: -2277836.609771
EM: Round [214] log likelihood: -2277836.608833
EM: Round [215] log likelihood: -2277836.607912
EM: Round [216] log likelihood: -2277836.607008
EM: Round [217] log likelihood: -2277836.606120
EM: Round [218] log likelihood: -2277836.605247
EM: Round [219] log likelihood: -2277836.604389
EM: Round [220] log likelihood: -2277836.603547
EM: Round [221] log likelihood: -2277836.602720
EM: Round [222] log likelihood: -2277836.601907
EM: Round [223] log likelihood: -2277836.601108
EM: Round [224] log likelihood: -2277836.600324
EM: Round [225] log likelihood: -2277836.599553
EM: Round [226] log likelihood: -2277836.598795
EM: Round [227] log likelihood: -2277836.598051
EM: Round [228] log likelihood: -2277836.597320
EM: Round [229] log likelihood: -2277836.596602
EM: Round [230] log likelihood: -2277836.595897
EM: Round [231] log likelihood: -2277836.595203
EM: Round [232] log likelihood: -2277836.594522
EM: Round [233] log likelihood: -2277836.593853
EM: Round [234] log likelihood: -2277836.593195
EM: Round [235] log likelihood: -2277836.592549
EM: Round [236] log likelihood: -2277836.591914
EM: Round [237] log likelihood: -2277836.591290
EM: Round [238] log likelihood: -2277836.590677
EM: Round [239] log likelihood: -2277836.590075
EM: Round [240] log likelihood: -2277836.589483
EM: Round [241] log likelihood: -2277836.588901
EM: Round [242] log likelihood: -2277836.588330
EM: Round [243] log likelihood: -2277836.587768
EM: Round [244] log likelihood: -2277836.587216
EM: Round [245] log likelihood: -2277836.586674
EM: Round [246] log likelihood: -2277836.586141
EM: Round [247] log likelihood: -2277836.585617
EM: Round [248] log likelihood: -2277836.585103
EM: Round [249] log likelihood: -2277836.584597
EM: Round [250] log likelihood: -2277836.584100
EM: Round [251] log likelihood: -2277836.583611
EM: Round [252] log likelihood: -2277836.583131
EM: Round [253] log likelihood: -2277836.582659
EM: Round [254] log likelihood: -2277836.582196
EM: Round [255] log likelihood: -2277836.581740
EM: Round [256] log likelihood: -2277836.581292
EM: Round [257] log likelihood: -2277836.580852
EM: Round [258] log likelihood: -2277836.580419
EM: Round [259] log likelihood: -2277836.579994
EM: Round [260] log likelihood: -2277836.579576
EM: Round [261] log likelihood: -2277836.579166
EM: Round [262] log likelihood: -2277836.578762
EM: Round [263] log likelihood: -2277836.578365
EM: Round [264] log likelihood: -2277836.577975
EM: Round [265] log likelihood: -2277836.577592
EM: Round [266] log likelihood: -2277836.577215
EM: Round [267] log likelihood: -2277836.576845
EM: Round [268] log likelihood: -2277836.576481
EM: Round [269] log likelihood: -2277836.576123
EM: Round [270] log likelihood: -2277836.575772
EM: Round [271] log likelihood: -2277836.575426
EM: Round [272] log likelihood: -2277836.575086
EM: Round [273] log likelihood: -2277836.574752
EM: Round [274] log likelihood: -2277836.574424
EM: Round [275] log likelihood: -2277836.574102
EM: Round [276] log likelihood: -2277836.573784
EM: Round [277] log likelihood: -2277836.573473
EM: Round [278] log likelihood: -2277836.573166
EM: Round [279] log likelihood: -2277836.572865
EM: Round [280] log likelihood: -2277836.572569
EM: Round [281] log likelihood: -2277836.572278
EM: Round [282] log likelihood: -2277836.571992
EM: Round [283] log likelihood: -2277836.571710
EM: Round [284] log likelihood: -2277836.571434
EM: Round [285] log likelihood: -2277836.571162
EM: Round [286] log likelihood: -2277836.570895
EM: Round [287] log likelihood: -2277836.570632
EM: Round [288] log likelihood: -2277836.570374
EM: Round [289] log likelihood: -2277836.570120
EM: Round [290] log likelihood: -2277836.569871
EM: Round [291] log likelihood: -2277836.569625
EM: Round [292] log likelihood: -2277836.569384
EM: Round [293] log likelihood: -2277836.569147
EM: Round [294] log likelihood: -2277836.568914
EM: Round [295] log likelihood: -2277836.568685
EM: Round [296] log likelihood: -2277836.568460
EM: Round [297] log likelihood: -2277836.568238
EM: Round [298] log likelihood: -2277836.568020
EM: Round [299] log likelihood: -2277836.567806
EM: Round [300] log likelihood: -2277836.567596
EM: Round [301] log likelihood: -2277836.567389
EM: Round [302] log likelihood: -2277836.567185
EM: Round [303] log likelihood: -2277836.566985
EM: Round [304] log likelihood: -2277836.566789
EM: Round [305] log likelihood: -2277836.566595
EM: Round [306] log likelihood: -2277836.566405
EM: Round [307] log likelihood: -2277836.566219
EM: Round [308] log likelihood: -2277836.566035
EM: Round [309] log likelihood: -2277836.565854
EM: Round [310] log likelihood: -2277836.565677
EM: Round [311] log likelihood: -2277836.565502
EM: Round [312] log likelihood: -2277836.565330
EM: Round [313] log likelihood: -2277836.565161
EM: Round [314] log likelihood: -2277836.564995
EM: Round [315] log likelihood: -2277836.564832
EM: Round [316] log likelihood: -2277836.564672
EM: Round [317] log likelihood: -2277836.564514
EM: Round [318] log likelihood: -2277836.564359
EM: Round [319] log likelihood: -2277836.564206
EM: Round [320] log likelihood: -2277836.564056
EM: Round [321] log likelihood: -2277836.563909
EM: Round [322] log likelihood: -2277836.563764
EM: Round [323] log likelihood: -2277836.563621
EM: Round [324] log likelihood: -2277836.563481
EM: Round [325] log likelihood: -2277836.563343
EM: Round [326] log likelihood: -2277836.563208
EM: Round [327] log likelihood: -2277836.563075
EM: Round [328] log likelihood: -2277836.562944
EM: Round [329] log likelihood: -2277836.562815
EM: Round [330] log likelihood: -2277836.562688
EM: Round [331] log likelihood: -2277836.562563
EM: Round [332] log likelihood: -2277836.562441
EM: Round [333] log likelihood: -2277836.562320
EM: Round [334] log likelihood: -2277836.562202
EM: Round [335] log likelihood: -2277836.562086
EM: Round [336] log likelihood: -2277836.561971
EM: Round [337] log likelihood: -2277836.561858
EM: Round [338] log likelihood: -2277836.561748
EM: Round [339] log likelihood: -2277836.561639
EM: Round [340] log likelihood: -2277836.561532
EM: Round [341] log likelihood: -2277836.561426
EM: Round [342] log likelihood: -2277836.561323
EM: Round [343] log likelihood: -2277836.561221
EM: Round [344] log likelihood: -2277836.561121
EM: Round [345] log likelihood: -2277836.561022
EM: Stopping iterations at round 345 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -2275720.736574
EM: Round [1] log likelihood: -2275281.122437
EM: Round [2] log likelihood: -2275129.738210
EM: Round [3] log likelihood: -2275059.896991
EM: Round [4] log likelihood: -2275023.601743
EM: Round [5] log likelihood: -2275003.398684
EM: Round [6] log likelihood: -2274991.520966
EM: Round [7] log likelihood: -2274984.166039
EM: Round [8] log likelihood: -2274979.372556
EM: Round [9] log likelihood: -2274976.091443
EM: Round [10] log likelihood: -2274973.743020
EM: Round [11] log likelihood: -2274971.995782
EM: Round [12] log likelihood: -2274970.652876
EM: Round [13] log likelihood: -2274969.592666
EM: Round [14] log likelihood: -2274968.736970
EM: Round [15] log likelihood: -2274968.033628
EM: Round [16] log likelihood: -2274967.446643
EM: Round [17] log likelihood: -2274966.950420
EM: Round [18] log likelihood: -2274966.526281
EM: Round [19] log likelihood: -2274966.160284
EM: Round [20] log likelihood: -2274965.841818
EM: Round [21] log likelihood: -2274965.562666
EM: Round [22] log likelihood: -2274965.316369
EM: Round [23] log likelihood: -2274965.097783
EM: Round [24] log likelihood: -2274964.902760
EM: Round [25] log likelihood: -2274964.727920
EM: Round [26] log likelihood: -2274964.570482
EM: Round [27] log likelihood: -2274964.428136
EM: Round [28] log likelihood: -2274964.298952
EM: Round [29] log likelihood: -2274964.181299
EM: Round [30] log likelihood: -2274964.073797
EM: Round [31] log likelihood: -2274963.975263
EM: Round [32] log likelihood: -2274963.884687
EM: Round [33] log likelihood: -2274963.801192
EM: Round [34] log likelihood: -2274963.724022
EM: Round [35] log likelihood: -2274963.652517
EM: Round [36] log likelihood: -2274963.586099
EM: Round [37] log likelihood: -2274963.524264
EM: Round [38] log likelihood: -2274963.466566
EM: Round [39] log likelihood: -2274963.412612
EM: Round [40] log likelihood: -2274963.362055
EM: Round [41] log likelihood: -2274963.314586
EM: Round [42] log likelihood: -2274963.269929
EM: Round [43] log likelihood: -2274963.227842
EM: Round [44] log likelihood: -2274963.188104
EM: Round [45] log likelihood: -2274963.150519
EM: Round [46] log likelihood: -2274963.114911
EM: Round [47] log likelihood: -2274963.081123
EM: Round [48] log likelihood: -2274963.049011
EM: Round [49] log likelihood: -2274963.018448
EM: Round [50] log likelihood: -2274962.989316
EM: Round [51] log likelihood: -2274962.961511
EM: Round [52] log likelihood: -2274962.934936
EM: Round [53] log likelihood: -2274962.909507
EM: Round [54] log likelihood: -2274962.885143
EM: Round [55] log likelihood: -2274962.861773
EM: Round [56] log likelihood: -2274962.839332
EM: Round [57] log likelihood: -2274962.817759
EM: Round [58] log likelihood: -2274962.797000
EM: Round [59] log likelihood: -2274962.777004
EM: Round [60] log likelihood: -2274962.757727
EM: Round [61] log likelihood: -2274962.739125
EM: Round [62] log likelihood: -2274962.721159
EM: Round [63] log likelihood: -2274962.703795
EM: Round [64] log likelihood: -2274962.686999
EM: Round [65] log likelihood: -2274962.670740
EM: Round [66] log likelihood: -2274962.654990
EM: Round [67] log likelihood: -2274962.639724
EM: Round [68] log likelihood: -2274962.624917
EM: Round [69] log likelihood: -2274962.610546
EM: Round [70] log likelihood: -2274962.596592
EM: Round [71] log likelihood: -2274962.583034
EM: Round [72] log likelihood: -2274962.569854
EM: Round [73] log likelihood: -2274962.557037
EM: Round [74] log likelihood: -2274962.544565
EM: Round [75] log likelihood: -2274962.532424
EM: Round [76] log likelihood: -2274962.520600
EM: Round [77] log likelihood: -2274962.509082
EM: Round [78] log likelihood: -2274962.497855
EM: Round [79] log likelihood: -2274962.486910
EM: Round [80] log likelihood: -2274962.476235
EM: Round [81] log likelihood: -2274962.465821
EM: Round [82] log likelihood: -2274962.455657
EM: Round [83] log likelihood: -2274962.445735
EM: Round [84] log likelihood: -2274962.436047
EM: Round [85] log likelihood: -2274962.426584
EM: Round [86] log likelihood: -2274962.417339
EM: Round [87] log likelihood: -2274962.408304
EM: Round [88] log likelihood: -2274962.399474
EM: Round [89] log likelihood: -2274962.390840
EM: Round [90] log likelihood: -2274962.382398
EM: Round [91] log likelihood: -2274962.374142
EM: Round [92] log likelihood: -2274962.366065
EM: Round [93] log likelihood: -2274962.358162
EM: Round [94] log likelihood: -2274962.350429
EM: Round [95] log likelihood: -2274962.342861
EM: Round [96] log likelihood: -2274962.335452
EM: Round [97] log likelihood: -2274962.328199
EM: Round [98] log likelihood: -2274962.321097
EM: Round [99] log likelihood: -2274962.314142
EM: Round [100] log likelihood: -2274962.307331
EM: Round [101] log likelihood: -2274962.300658
EM: Round [102] log likelihood: -2274962.294122
EM: Round [103] log likelihood: -2274962.287718
EM: Round [104] log likelihood: -2274962.281443
EM: Round [105] log likelihood: -2274962.275293
EM: Round [106] log likelihood: -2274962.269267
EM: Round [107] log likelihood: -2274962.263360
EM: Round [108] log likelihood: -2274962.257570
EM: Round [109] log likelihood: -2274962.251893
EM: Round [110] log likelihood: -2274962.246328
EM: Round [111] log likelihood: -2274962.240872
EM: Round [112] log likelihood: -2274962.235522
EM: Round [113] log likelihood: -2274962.230276
EM: Round [114] log likelihood: -2274962.225131
EM: Round [115] log likelihood: -2274962.220085
EM: Round [116] log likelihood: -2274962.215136
EM: Round [117] log likelihood: -2274962.210281
EM: Round [118] log likelihood: -2274962.205520
EM: Round [119] log likelihood: -2274962.200848
EM: Round [120] log likelihood: -2274962.196266
EM: Round [121] log likelihood: -2274962.191770
EM: Round [122] log likelihood: -2274962.187359
EM: Round [123] log likelihood: -2274962.183030
EM: Round [124] log likelihood: -2274962.178783
EM: Round [125] log likelihood: -2274962.174616
EM: Round [126] log likelihood: -2274962.170527
EM: Round [127] log likelihood: -2274962.166513
EM: Round [128] log likelihood: -2274962.162575
EM: Round [129] log likelihood: -2274962.158709
EM: Round [130] log likelihood: -2274962.154915
EM: Round [131] log likelihood: -2274962.151191
EM: Round [132] log likelihood: -2274962.147536
EM: Round [133] log likelihood: -2274962.143949
EM: Round [134] log likelihood: -2274962.140427
EM: Round [135] log likelihood: -2274962.136970
EM: Round [136] log likelihood: -2274962.133576
EM: Round [137] log likelihood: -2274962.130244
EM: Round [138] log likelihood: -2274962.126973
EM: Round [139] log likelihood: -2274962.123762
EM: Round [140] log likelihood: -2274962.120609
EM: Round [141] log likelihood: -2274962.117514
EM: Round [142] log likelihood: -2274962.114475
EM: Round [143] log likelihood: -2274962.111491
EM: Round [144] log likelihood: -2274962.108561
EM: Round [145] log likelihood: -2274962.105684
EM: Round [146] log likelihood: -2274962.102859
EM: Round [147] log likelihood: -2274962.100084
EM: Round [148] log likelihood: -2274962.097360
EM: Round [149] log likelihood: -2274962.094685
EM: Round [150] log likelihood: -2274962.092058
EM: Round [151] log likelihood: -2274962.089478
EM: Round [152] log likelihood: -2274962.086944
EM: Round [153] log likelihood: -2274962.084456
EM: Round [154] log likelihood: -2274962.082012
EM: Round [155] log likelihood: -2274962.079612
EM: Round [156] log likelihood: -2274962.077255
EM: Round [157] log likelihood: -2274962.074940
EM: Round [158] log likelihood: -2274962.072666
EM: Round [159] log likelihood: -2274962.070433
EM: Round [160] log likelihood: -2274962.068239
EM: Round [161] log likelihood: -2274962.066084
EM: Round [162] log likelihood: -2274962.063968
EM: Round [163] log likelihood: -2274962.061889
EM: Round [164] log likelihood: -2274962.059847
EM: Round [165] log likelihood: -2274962.057841
EM: Round [166] log likelihood: -2274962.055870
EM: Round [167] log likelihood: -2274962.053935
EM: Round [168] log likelihood: -2274962.052033
EM: Round [169] log likelihood: -2274962.050165
EM: Round [170] log likelihood: -2274962.048330
EM: Round [171] log likelihood: -2274962.046528
EM: Round [172] log likelihood: -2274962.044757
EM: Round [173] log likelihood: -2274962.043017
EM: Round [174] log likelihood: -2274962.041308
EM: Round [175] log likelihood: -2274962.039629
EM: Round [176] log likelihood: -2274962.037980
EM: Round [177] log likelihood: -2274962.036359
EM: Round [178] log likelihood: -2274962.034767
EM: Round [179] log likelihood: -2274962.033203
EM: Round [180] log likelihood: -2274962.031666
EM: Round [181] log likelihood: -2274962.030156
EM: Round [182] log likelihood: -2274962.028672
EM: Round [183] log likelihood: -2274962.027214
EM: Round [184] log likelihood: -2274962.025782
EM: Round [185] log likelihood: -2274962.024375
EM: Round [186] log likelihood: -2274962.022992
EM: Round [187] log likelihood: -2274962.021634
EM: Round [188] log likelihood: -2274962.020299
EM: Round [189] log likelihood: -2274962.018987
EM: Round [190] log likelihood: -2274962.017698
EM: Round [191] log likelihood: -2274962.016432
EM: Round [192] log likelihood: -2274962.015188
EM: Round [193] log likelihood: -2274962.013965
EM: Round [194] log likelihood: -2274962.012763
EM: Round [195] log likelihood: -2274962.011583
EM: Round [196] log likelihood: -2274962.010422
EM: Round [197] log likelihood: -2274962.009282
EM: Round [198] log likelihood: -2274962.008162
EM: Round [199] log likelihood: -2274962.007061
EM: Round [200] log likelihood: -2274962.005979
EM: Round [201] log likelihood: -2274962.004916
EM: Round [202] log likelihood: -2274962.003871
EM: Round [203] log likelihood: -2274962.002845
EM: Round [204] log likelihood: -2274962.001836
EM: Round [205] log likelihood: -2274962.000844
EM: Round [206] log likelihood: -2274961.999870
EM: Round [207] log likelihood: -2274961.998912
EM: Round [208] log likelihood: -2274961.997971
EM: Round [209] log likelihood: -2274961.997046
EM: Round [210] log likelihood: -2274961.996138
EM: Round [211] log likelihood: -2274961.995244
EM: Round [212] log likelihood: -2274961.994366
EM: Round [213] log likelihood: -2274961.993504
EM: Round [214] log likelihood: -2274961.992656
EM: Round [215] log likelihood: -2274961.991822
EM: Round [216] log likelihood: -2274961.991003
EM: Round [217] log likelihood: -2274961.990199
EM: Round [218] log likelihood: -2274961.989407
EM: Round [219] log likelihood: -2274961.988630
EM: Round [220] log likelihood: -2274961.987866
EM: Round [221] log likelihood: -2274961.987115
EM: Round [222] log likelihood: -2274961.986376
EM: Round [223] log likelihood: -2274961.985651
EM: Round [224] log likelihood: -2274961.984938
EM: Round [225] log likelihood: -2274961.984237
EM: Round [226] log likelihood: -2274961.983548
EM: Round [227] log likelihood: -2274961.982871
EM: Round [228] log likelihood: -2274961.982205
EM: Round [229] log likelihood: -2274961.981551
EM: Round [230] log likelihood: -2274961.980908
EM: Round [231] log likelihood: -2274961.980276
EM: Round [232] log likelihood: -2274961.979655
EM: Round [233] log likelihood: -2274961.979045
EM: Round [234] log likelihood: -2274961.978445
EM: Round [235] log likelihood: -2274961.977855
EM: Round [236] log likelihood: -2274961.977275
EM: Round [237] log likelihood: -2274961.976705
EM: Round [238] log likelihood: -2274961.976145
EM: Round [239] log likelihood: -2274961.975594
EM: Round [240] log likelihood: -2274961.975053
EM: Round [241] log likelihood: -2274961.974521
EM: Round [242] log likelihood: -2274961.973998
EM: Round [243] log likelihood: -2274961.973484
EM: Round [244] log likelihood: -2274961.972979
EM: Round [245] log likelihood: -2274961.972482
EM: Round [246] log likelihood: -2274961.971994
EM: Round [247] log likelihood: -2274961.971514
EM: Round [248] log likelihood: -2274961.971042
EM: Round [249] log likelihood: -2274961.970578
EM: Round [250] log likelihood: -2274961.970122
EM: Round [251] log likelihood: -2274961.969674
EM: Round [252] log likelihood: -2274961.969233
EM: Round [253] log likelihood: -2274961.968800
EM: Round [254] log likelihood: -2274961.968375
EM: Round [255] log likelihood: -2274961.967956
EM: Round [256] log likelihood: -2274961.967545
EM: Round [257] log likelihood: -2274961.967140
EM: Round [258] log likelihood: -2274961.966743
EM: Round [259] log likelihood: -2274961.966352
EM: Round [260] log likelihood: -2274961.965968
EM: Round [261] log likelihood: -2274961.965590
EM: Round [262] log likelihood: -2274961.965219
EM: Round [263] log likelihood: -2274961.964854
EM: Round [264] log likelihood: -2274961.964495
EM: Round [265] log likelihood: -2274961.964142
EM: Round [266] log likelihood: -2274961.963795
EM: Round [267] log likelihood: -2274961.963454
EM: Round [268] log likelihood: -2274961.963119
EM: Round [269] log likelihood: -2274961.962790
EM: Round [270] log likelihood: -2274961.962466
EM: Round [271] log likelihood: -2274961.962147
EM: Round [272] log likelihood: -2274961.961834
EM: Round [273] log likelihood: -2274961.961526
EM: Round [274] log likelihood: -2274961.961224
EM: Round [275] log likelihood: -2274961.960926
EM: Round [276] log likelihood: -2274961.960634
EM: Round [277] log likelihood: -2274961.960346
EM: Round [278] log likelihood: -2274961.960063
EM: Round [279] log likelihood: -2274961.959786
EM: Round [280] log likelihood: -2274961.959512
EM: Round [281] log likelihood: -2274961.959244
EM: Round [282] log likelihood: -2274961.958980
EM: Round [283] log likelihood: -2274961.958720
EM: Round [284] log likelihood: -2274961.958465
EM: Round [285] log likelihood: -2274961.958214
EM: Round [286] log likelihood: -2274961.957967
EM: Round [287] log likelihood: -2274961.957724
EM: Round [288] log likelihood: -2274961.957486
EM: Round [289] log likelihood: -2274961.957251
EM: Round [290] log likelihood: -2274961.957021
EM: Round [291] log likelihood: -2274961.956794
EM: Round [292] log likelihood: -2274961.956571
EM: Round [293] log likelihood: -2274961.956352
EM: Round [294] log likelihood: -2274961.956137
EM: Round [295] log likelihood: -2274961.955925
EM: Round [296] log likelihood: -2274961.955717
EM: Round [297] log likelihood: -2274961.955512
EM: Round [298] log likelihood: -2274961.955311
EM: Round [299] log likelihood: -2274961.955113
EM: Round [300] log likelihood: -2274961.954918
EM: Round [301] log likelihood: -2274961.954727
EM: Round [302] log likelihood: -2274961.954539
EM: Round [303] log likelihood: -2274961.954354
EM: Round [304] log likelihood: -2274961.954172
EM: Round [305] log likelihood: -2274961.953993
EM: Round [306] log likelihood: -2274961.953817
EM: Round [307] log likelihood: -2274961.953644
EM: Round [308] log likelihood: -2274961.953474
EM: Round [309] log likelihood: -2274961.953307
EM: Round [310] log likelihood: -2274961.953143
EM: Round [311] log likelihood: -2274961.952981
EM: Round [312] log likelihood: -2274961.952823
EM: Round [313] log likelihood: -2274961.952666
EM: Round [314] log likelihood: -2274961.952513
EM: Round [315] log likelihood: -2274961.952362
EM: Round [316] log likelihood: -2274961.952213
EM: Round [317] log likelihood: -2274961.952067
EM: Round [318] log likelihood: -2274961.951924
EM: Round [319] log likelihood: -2274961.951783
EM: Round [320] log likelihood: -2274961.951644
EM: Round [321] log likelihood: -2274961.951507
EM: Round [322] log likelihood: -2274961.951373
EM: Round [323] log likelihood: -2274961.951241
EM: Round [324] log likelihood: -2274961.951112
EM: Round [325] log likelihood: -2274961.950984
EM: Round [326] log likelihood: -2274961.950859
EM: Round [327] log likelihood: -2274961.950735
EM: Round [328] log likelihood: -2274961.950614
EM: Round [329] log likelihood: -2274961.950495
EM: Round [330] log likelihood: -2274961.950378
EM: Round [331] log likelihood: -2274961.950262
EM: Round [332] log likelihood: -2274961.950149
EM: Round [333] log likelihood: -2274961.950037
EM: Round [334] log likelihood: -2274961.949928
EM: Round [335] log likelihood: -2274961.949820
EM: Round [336] log likelihood: -2274961.949714
EM: Round [337] log likelihood: -2274961.949610
EM: Round [338] log likelihood: -2274961.949507
EM: Round [339] log likelihood: -2274961.949407
EM: Round [340] log likelihood: -2274961.949308
EM: Stopping iterations at round 340 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.PIzTXzsDjx/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.PIzTXzsDjx/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.PIzTXzsDjx/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 296584083 > /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.PIzTXzsDjx/ctat_genome_lib_build_dir > /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.PIzTXzsDjx/ctat_genome_lib_build_dir --annotate /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.PIzTXzsDjx/ctat_genome_lib_build_dir
-done, see /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.PIzTXzsDjx/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1011, filtered: 5753)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.PIzTXzsDjx/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.PIzTXzsDjx/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
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WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000223753.2]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000259953.2]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000232894.1]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000235979.9]
WARNING, no entry stored in dbm for [ENSG00000245958.6]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000259683.1]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000188755.10]
WARNING, no entry stored in dbm for [ENSG00000235749.3]
WARNING, no entry stored in dbm for [ENSG00000233048.1]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000232599.1]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000224086.6]
WARNING, no entry stored in dbm for [ENSG00000232599.1]
WARNING, no entry stored in dbm for [ENSG00000253417.5]
WARNING, no entry stored in dbm for [ENSG00000271699.5]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000233955.1]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000286387.1]
WARNING, no entry stored in dbm for [ENSG00000230116.1]
WARNING, no entry stored in dbm for [ENSG00000230559.1]
WARNING, no entry stored in dbm for [ENSG00000276758.1]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000254477.2]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000254477.2]
WARNING, no entry stored in dbm for [ENSG00000266869.2]
WARNING, no entry stored in dbm for [ENSG00000229739.4]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000123201.14]
WARNING, no entry stored in dbm for [ENSG00000251314.2]
WARNING, no entry stored in dbm for [ENSG00000286797.1]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000106133.18]
WARNING, no entry stored in dbm for [ENSG00000226240.2]
WARNING, no entry stored in dbm for [ENSG00000271162.1]
WARNING, no entry stored in dbm for [ENSG00000245651.3]
WARNING, no entry stored in dbm for [ENSG00000259692.6]
WARNING, no entry stored in dbm for [ENSG00000287858.1]
WARNING, no entry stored in dbm for [ENSG00000266869.2]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000225594.1]
WARNING, no entry stored in dbm for [ENSG00000286675.1]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000282772.1]
WARNING, no entry stored in dbm for [ENSG00000266869.2]
WARNING, no entry stored in dbm for [ENSG00000284977.2]
WARNING, no entry stored in dbm for [ENSG00000242999.3]
WARNING, no entry stored in dbm for [ENSG00000218048.2]
WARNING, no entry stored in dbm for [ENSG00000234072.1]
WARNING, no entry stored in dbm for [ENSG00000287721.1]
WARNING, no entry stored in dbm for [ENSG00000244952.2]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000287411.1]
WARNING, no entry stored in dbm for [ENSG00000281641.3]
WARNING, no entry stored in dbm for [ENSG00000230116.1]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000267707.2]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000232599.1]
WARNING, no entry stored in dbm for [ENSG00000248161.5]
WARNING, no entry stored in dbm for [ENSG00000260528.5]
WARNING, no entry stored in dbm for [ENSG00000281344.1]
WARNING, no entry stored in dbm for [ENSG00000229608.1]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
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WARNING, no entry stored in dbm for [ENSG00000180438.15]
WARNING, no entry stored in dbm for [ENSG00000215837.7]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000266869.2]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000197847.12]
WARNING, no entry stored in dbm for [ENSG00000284428.1]
WARNING, no entry stored in dbm for [ENSG00000241288.8]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000258454.1]
WARNING, no entry stored in dbm for [ENSG00000233025.1]
WARNING, no entry stored in dbm for [ENSG00000230131.6]
WARNING, no entry stored in dbm for [ENSG00000286156.1]
WARNING, no entry stored in dbm for [ENSG00000245573.9]
WARNING, no entry stored in dbm for [ENSG00000259404.5]
WARNING, no entry stored in dbm for [ENSG00000235749.3]
WARNING, no entry stored in dbm for [ENSG00000237742.7]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000241860.7]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000259418.1]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000285600.1]
WARNING, no entry stored in dbm for [ENSG00000269032.1]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000266869.2]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000236491.1]
WARNING, no entry stored in dbm for [ENSG00000214189.9]
WARNING, no entry stored in dbm for [ENSG00000224365.1]
WARNING, no entry stored in dbm for [ENSG00000282772.1]
WARNING, no entry stored in dbm for [ENSG00000236869.1]
WARNING, no entry stored in dbm for [ENSG00000288067.1]
WARNING, no entry stored in dbm for [ENSG00000237036.5]
WARNING, no entry stored in dbm for [ENSG00000233836.7]
WARNING, no entry stored in dbm for [ENSG00000249196.6]
WARNING, no entry stored in dbm for [ENSG00000269482.1]
WARNING, no entry stored in dbm for [ENSG00000262791.1]
WARNING, no entry stored in dbm for [ENSG00000276805.2]
WARNING, no entry stored in dbm for [ENSG00000262445.3]
WARNING, no entry stored in dbm for [ENSG00000254143.1]
WARNING, no entry stored in dbm for [ENSG00000236404.10]
WARNING, no entry stored in dbm for [ENSG00000263520.1]
WARNING, no entry stored in dbm for [ENSG00000280870.3]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000234182.2]
WARNING, no entry stored in dbm for [ENSG00000257642.1]
WARNING, no entry stored in dbm for [ENSG00000250227.1]
WARNING, no entry stored in dbm for [ENSG00000274776.1]
WARNING, no entry stored in dbm for [ENSG00000235706.8]
WARNING, no entry stored in dbm for [ENSG00000108958.4]
WARNING, no entry stored in dbm for [ENSG00000205231.1]
WARNING, no entry stored in dbm for [ENSG00000283698.1]
WARNING, no entry stored in dbm for [ENSG00000286115.1]
WARNING, no entry stored in dbm for [ENSG00000272578.5]
WARNING, no entry stored in dbm for [ENSG00000178464.6]
WARNING, no entry stored in dbm for [ENSG00000108448.22]
WARNING, no entry stored in dbm for [ENSG00000180438.15]
WARNING, no entry stored in dbm for [ENSG00000188185.13]
WARNING, no entry stored in dbm for [ENSG00000224533.4]
WARNING, no entry stored in dbm for [ENSG00000224533.4]
WARNING, no entry stored in dbm for [ENSG00000253878.5]
WARNING, no entry stored in dbm for [ENSG00000242753.2]
WARNING, no entry stored in dbm for [ENSG00000254783.1]
WARNING, no entry stored in dbm for [ENSG00000223930.7]
WARNING, no entry stored in dbm for [ENSG00000267105.1]
WARNING, no entry stored in dbm for [ENSG00000249936.3]
WARNING, no entry stored in dbm for [ENSG00000234911.2]
WARNING, no entry stored in dbm for [ENSG00000235833.1]
WARNING, no entry stored in dbm for [ENSG00000260922.2]
WARNING, no entry stored in dbm for [ENSG00000271500.1]
WARNING, no entry stored in dbm for [ENSG00000068781.21]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000214846.4]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000241383.2]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000264940.5]
WARNING, no entry stored in dbm for [ENSG00000280007.1]
WARNING, no entry stored in dbm for [ENSG00000248121.8]
WARNING, no entry stored in dbm for [ENSG00000247157.7]
WARNING, no entry stored in dbm for [ENSG00000180747.15]
WARNING, no entry stored in dbm for [ENSG00000223979.2]
WARNING, no entry stored in dbm for [ENSG00000245112.2]
WARNING, no entry stored in dbm for [ENSG00000230438.7]
WARNING, no entry stored in dbm for [ENSG00000258844.2]
WARNING, no entry stored in dbm for [ENSG00000221028.1]
WARNING, no entry stored in dbm for [ENSG00000254661.3]
WARNING, no entry stored in dbm for [ENSG00000275340.1]
WARNING, no entry stored in dbm for [ENSG00000254449.1]
WARNING, no entry stored in dbm for [ENSG00000278737.1]
WARNING, no entry stored in dbm for [ENSG00000272030.1]
WARNING, no entry stored in dbm for [ENSG00000229585.4]
WARNING, no entry stored in dbm for [ENSG00000224907.1]
WARNING, no entry stored in dbm for [ENSG00000206888.1]
WARNING, no entry stored in dbm for [ENSG00000274642.1]
WARNING, no entry stored in dbm for [ENSG00000285835.1]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000248927.1]
WARNING, no entry stored in dbm for [ENSG00000233609.3]
WARNING, no entry stored in dbm for [ENSG00000221817.10]
WARNING, no entry stored in dbm for [ENSG00000221817.10]
WARNING, no entry stored in dbm for [ENSG00000215068.8]
WARNING, no entry stored in dbm for [ENSG00000227347.1]
WARNING, no entry stored in dbm for [ENSG00000205771.6]
WARNING, no entry stored in dbm for [ENSG00000251495.1]
WARNING, no entry stored in dbm for [ENSG00000214626.2]
WARNING, no entry stored in dbm for [ENSG00000272655.2]
WARNING, no entry stored in dbm for [ENSG00000278730.1]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000244652.1]
WARNING, no entry stored in dbm for [ENSG00000241162.3]
WARNING, no entry stored in dbm for [ENSG00000240490.3]
WARNING, no entry stored in dbm for [ENSG00000237770.2]
WARNING, no entry stored in dbm for [ENSG00000229739.4]
WARNING, no entry stored in dbm for [ENSG00000268120.1]
WARNING, no entry stored in dbm for [ENSG00000227418.6]
WARNING, no entry stored in dbm for [ENSG00000183444.10]
WARNING, no entry stored in dbm for [ENSG00000168992.4]
WARNING, no entry stored in dbm for [ENSG00000258853.1]
WARNING, no entry stored in dbm for [ENSG00000228206.2]
WARNING, no entry stored in dbm for [ENSG00000234773.7]
WARNING, no entry stored in dbm for [ENSG00000238755.3]
WARNING, no entry stored in dbm for [ENSG00000284966.3]
WARNING, no entry stored in dbm for [ENSG00000272970.3]
WARNING, no entry stored in dbm for [ENSG00000262155.2]
WARNING, no entry stored in dbm for [ENSG00000237406.1]
WARNING, no entry stored in dbm for [ENSG00000244151.1]
WARNING, no entry stored in dbm for [ENSG00000239523.6]
WARNING, no entry stored in dbm for [ENSG00000237711.1]
WARNING, no entry stored in dbm for [ENSG00000259404.5]
WARNING, no entry stored in dbm for [ENSG00000210127.1]
WARNING, no entry stored in dbm for [ENSG00000201591.1]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000230105.1]
WARNING, no entry stored in dbm for [ENSG00000234337.4]
WARNING, no entry stored in dbm for [ENSG00000236830.7]
WARNING, no entry stored in dbm for [ENSG00000249628.3]
WARNING, no entry stored in dbm for [ENSG00000230323.6]
WARNING, no entry stored in dbm for [ENSG00000255248.9]
WARNING, no entry stored in dbm for [ENSG00000255248.9]
WARNING, no entry stored in dbm for [ENSG00000255248.9]
WARNING, no entry stored in dbm for [ENSG00000253557.6]
WARNING, no entry stored in dbm for [ENSG00000256193.6]
WARNING, no entry stored in dbm for [ENSG00000225746.13]
WARNING, no entry stored in dbm for [ENSG00000261373.1]
WARNING, no entry stored in dbm for [ENSG00000284448.1]
WARNING, no entry stored in dbm for [ENSG00000235269.2]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000225022.1]
WARNING, no entry stored in dbm for [ENSG00000225022.1]
WARNING, no entry stored in dbm for [ENSG00000224831.3]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000240429.1]
WARNING, no entry stored in dbm for [ENSG00000236481.1]
WARNING, no entry stored in dbm for [ENSG00000248837.7]
WARNING, no entry stored in dbm for [ENSG00000248837.7]
WARNING, no entry stored in dbm for [ENSG00000237149.5]
WARNING, no entry stored in dbm for [ENSG00000253665.1]
WARNING, no entry stored in dbm for [ENSG00000236975.2]
WARNING, no entry stored in dbm for [ENSG00000232527.8]
WARNING, no entry stored in dbm for [ENSG00000272779.1]
WARNING, no entry stored in dbm for [ENSG00000232613.6]
WARNING, no entry stored in dbm for [ENSG00000248810.2]
WARNING, no entry stored in dbm for [ENSG00000234663.7]
WARNING, no entry stored in dbm for [ENSG00000232079.7]
WARNING, no entry stored in dbm for [ENSG00000198685.4]
WARNING, no entry stored in dbm for [ENSG00000225564.6]
WARNING, no entry stored in dbm for [ENSG00000223823.1]
WARNING, no entry stored in dbm for [ENSG00000235437.8]
WARNING, no entry stored in dbm for [ENSG00000188825.14]
WARNING, no entry stored in dbm for [ENSG00000242759.8]
WARNING, no entry stored in dbm for [ENSG00000258441.1]
WARNING, no entry stored in dbm for [ENSG00000256443.1]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000203441.2]
WARNING, no entry stored in dbm for [ENSG00000270987.1]
WARNING, no entry stored in dbm for [ENSG00000283945.1]
WARNING, no entry stored in dbm for [ENSG00000286724.1]
WARNING, no entry stored in dbm for [ENSG00000227115.8]
WARNING, no entry stored in dbm for [ENSG00000230646.1]
WARNING, no entry stored in dbm for [ENSG00000228933.8]
WARNING, no entry stored in dbm for [ENSG00000237978.6]
WARNING, no entry stored in dbm for [ENSG00000231417.2]
WARNING, no entry stored in dbm for [ENSG00000197536.11]
WARNING, no entry stored in dbm for [ENSG00000259673.6]
WARNING, no entry stored in dbm for [ENSG00000258844.2]
WARNING, no entry stored in dbm for [ENSG00000286675.1]
WARNING, no entry stored in dbm for [ENSG00000253497.1]
WARNING, no entry stored in dbm for [ENSG00000253497.1]
WARNING, no entry stored in dbm for [ENSG00000227733.10]
WARNING, no entry stored in dbm for [ENSG00000227733.10]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000227688.2]
WARNING, no entry stored in dbm for [ENSG00000236086.4]
WARNING, no entry stored in dbm for [ENSG00000255519.1]
WARNING, no entry stored in dbm for [ENSG00000234705.2]
WARNING, no entry stored in dbm for [ENSG00000206341.7]
WARNING, no entry stored in dbm for [ENSG00000206341.7]
WARNING, no entry stored in dbm for [ENSG00000214922.9]
WARNING, no entry stored in dbm for [ENSG00000180229.12]
WARNING, no entry stored in dbm for [ENSG00000274471.2]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000166104.15]
WARNING, no entry stored in dbm for [ENSG00000285867.1]
WARNING, no entry stored in dbm for [ENSG00000257488.5]
WARNING, no entry stored in dbm for [ENSG00000286907.1]
WARNING, no entry stored in dbm for [ENSG00000201901.1]
WARNING, no entry stored in dbm for [ENSG00000205464.13]
WARNING, no entry stored in dbm for [ENSG00000283436.1]
WARNING, no entry stored in dbm for [ENSG00000229847.9]
WARNING, no entry stored in dbm for [ENSG00000231752.6]
WARNING, no entry stored in dbm for [ENSG00000255527.1]
WARNING, no entry stored in dbm for [ENSG00000233426.3]
WARNING, no entry stored in dbm for [ENSG00000280739.3]
WARNING, no entry stored in dbm for [ENSG00000226845.1]
WARNING, no entry stored in dbm for [ENSG00000223685.6]
WARNING, no entry stored in dbm for [ENSG00000258498.8]
WARNING, no entry stored in dbm for [ENSG00000203364.2]
WARNING, no entry stored in dbm for [ENSG00000231890.8]
WARNING, no entry stored in dbm for [ENSG00000226950.8]
WARNING, no entry stored in dbm for [ENSG00000277147.6]
WARNING, no entry stored in dbm for [ENSG00000233937.7]
WARNING, no entry stored in dbm for [ENSG00000187172.15]
WARNING, no entry stored in dbm for [ENSG00000233937.7]
WARNING, no entry stored in dbm for [ENSG00000248103.1]
WARNING, no entry stored in dbm for [ENSG00000233671.1]
WARNING, no entry stored in dbm for [ENSG00000270533.2]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000227240.2]
WARNING, no entry stored in dbm for [ENSG00000283541.1]
WARNING, no entry stored in dbm for [ENSG00000283541.1]
WARNING, no entry stored in dbm for [ENSG00000260896.6]
WARNING, no entry stored in dbm for [ENSG00000267489.5]
WARNING, no entry stored in dbm for [ENSG00000227676.4]
WARNING, no entry stored in dbm for [ENSG00000286277.1]
WARNING, no entry stored in dbm for [ENSG00000286277.1]
WARNING, no entry stored in dbm for [ENSG00000223812.8]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000236830.7]
WARNING, no entry stored in dbm for [ENSG00000204397.9]
WARNING, no entry stored in dbm for [ENSG00000188511.12]
WARNING, no entry stored in dbm for [ENSG00000188511.12]
WARNING, no entry stored in dbm for [ENSG00000180764.13]
WARNING, no entry stored in dbm for [ENSG00000231069.1]
WARNING, no entry stored in dbm for [ENSG00000286475.1]
WARNING, no entry stored in dbm for [ENSG00000280424.1]
WARNING, no entry stored in dbm for [ENSG00000216657.1]
WARNING, no entry stored in dbm for [ENSG00000223509.8]
WARNING, no entry stored in dbm for [ENSG00000236790.6]
WARNING, no entry stored in dbm for [ENSG00000231167.3]
WARNING, no entry stored in dbm for [ENSG00000244560.7]
WARNING, no entry stored in dbm for [ENSG00000282851.2]
WARNING, no entry stored in dbm for [ENSG00000223773.7]
WARNING, no entry stored in dbm for [ENSG00000236794.5]
WARNING, no entry stored in dbm for [ENSG00000279022.1]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000248417.1]
WARNING, no entry stored in dbm for [ENSG00000244723.3]
WARNING, no entry stored in dbm for [ENSG00000272578.5]
WARNING, no entry stored in dbm for [ENSG00000263878.2]
WARNING, no entry stored in dbm for [ENSG00000279987.1]
WARNING, no entry stored in dbm for [ENSG00000272595.2]
WARNING, no entry stored in dbm for [ENSG00000256591.5]
WARNING, no entry stored in dbm for [ENSG00000255468.7]
WARNING, no entry stored in dbm for [ENSG00000254756.1]
WARNING, no entry stored in dbm for [ENSG00000238045.9]
WARNING, no entry stored in dbm for [ENSG00000279742.1]
WARNING, no entry stored in dbm for [ENSG00000233818.1]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000231317.1]
WARNING, no entry stored in dbm for [ENSG00000271826.5]
WARNING, no entry stored in dbm for [ENSG00000288107.1]
WARNING, no entry stored in dbm for [ENSG00000285799.1]
WARNING, no entry stored in dbm for [ENSG00000254741.1]
WARNING, no entry stored in dbm for [ENSG00000229588.2]
WARNING, no entry stored in dbm for [ENSG00000286270.2]
WARNING, no entry stored in dbm for [ENSG00000277128.2]
WARNING, no entry stored in dbm for [ENSG00000232499.2]
WARNING, no entry stored in dbm for [ENSG00000285700.1]
WARNING, no entry stored in dbm for [ENSG00000237936.1]
WARNING, no entry stored in dbm for [ENSG00000275741.1]
WARNING, no entry stored in dbm for [ENSG00000233727.1]
WARNING, no entry stored in dbm for [ENSG00000275834.1]
WARNING, no entry stored in dbm for [ENSG00000286162.2]
WARNING, no entry stored in dbm for [ENSG00000284977.2]
WARNING, no entry stored in dbm for [ENSG00000197670.6]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000262619.2]
WARNING, no entry stored in dbm for [ENSG00000224691.1]
WARNING, no entry stored in dbm for [ENSG00000227220.1]
WARNING, no entry stored in dbm for [ENSG00000236166.1]
WARNING, no entry stored in dbm for [ENSG00000258744.2]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000261505.1]
WARNING, no entry stored in dbm for [ENSG00000249642.2]
WARNING, no entry stored in dbm for [ENSG00000259926.1]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000236532.6]
WARNING, no entry stored in dbm for [ENSG00000259683.1]
WARNING, no entry stored in dbm for [ENSG00000238105.7]
WARNING, no entry stored in dbm for [ENSG00000275557.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000277702.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000254609.1]
WARNING, no entry stored in dbm for [ENSG00000277895.1]
WARNING, no entry stored in dbm for [ENSG00000257252.6]
WARNING, no entry stored in dbm for [ENSG00000225705.2]
WARNING, no entry stored in dbm for [ENSG00000260261.2]
WARNING, no entry stored in dbm for [ENSG00000214900.11]
WARNING, no entry stored in dbm for [ENSG00000260971.4]
WARNING, no entry stored in dbm for [ENSG00000277332.1]
WARNING, no entry stored in dbm for [ENSG00000249706.1]
WARNING, no entry stored in dbm for [ENSG00000260037.5]
WARNING, no entry stored in dbm for [ENSG00000224479.6]
WARNING, no entry stored in dbm for [ENSG00000224738.1]
WARNING, no entry stored in dbm for [ENSG00000251378.1]
WARNING, no entry stored in dbm for [ENSG00000287101.1]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000276538.1]
WARNING, no entry stored in dbm for [ENSG00000262136.1]
WARNING, no entry stored in dbm for [ENSG00000224365.1]
WARNING, no entry stored in dbm for [ENSG00000234686.1]
WARNING, no entry stored in dbm for [ENSG00000254001.5]
WARNING, no entry stored in dbm for [ENSG00000284627.1]
WARNING, no entry stored in dbm for [ENSG00000248618.1]
WARNING, no entry stored in dbm for [ENSG00000273151.1]
WARNING, no entry stored in dbm for [ENSG00000224365.1]
WARNING, no entry stored in dbm for [ENSG00000263368.1]
WARNING, no entry stored in dbm for [ENSG00000280407.2]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000254859.1]
WARNING, no entry stored in dbm for [ENSG00000201395.1]
WARNING, no entry stored in dbm for [ENSG00000254859.1]
WARNING, no entry stored in dbm for [ENSG00000286011.1]
WARNING, no entry stored in dbm for [ENSG00000254951.7]
WARNING, no entry stored in dbm for [ENSG00000213862.4]
WARNING, no entry stored in dbm for [ENSG00000253671.3]
WARNING, no entry stored in dbm for [ENSG00000267040.6]
WARNING, no entry stored in dbm for [ENSG00000263766.5]
WARNING, no entry stored in dbm for [ENSG00000228782.7]
WARNING, no entry stored in dbm for [ENSG00000251131.2]
WARNING, no entry stored in dbm for [ENSG00000259429.5]
WARNING, no entry stored in dbm for [ENSG00000267277.1]
WARNING, no entry stored in dbm for [ENSG00000253636.1]
WARNING, no entry stored in dbm for [ENSG00000259404.5]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000250379.1]
WARNING, no entry stored in dbm for [ENSG00000279502.1]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000250090.1]
WARNING, no entry stored in dbm for [ENSG00000270799.1]
WARNING, no entry stored in dbm for [ENSG00000213866.3]
WARNING, no entry stored in dbm for [ENSG00000254208.1]
WARNING, no entry stored in dbm for [ENSG00000254019.1]
WARNING, no entry stored in dbm for [ENSG00000287814.1]
WARNING, no entry stored in dbm for [ENSG00000254363.6]
WARNING, no entry stored in dbm for [ENSG00000267532.5]
WARNING, no entry stored in dbm for [ENSG00000250237.1]
WARNING, no entry stored in dbm for [ENSG00000249335.2]
WARNING, no entry stored in dbm for [ENSG00000287115.1]
WARNING, no entry stored in dbm for [ENSG00000262791.1]
WARNING, no entry stored in dbm for [ENSG00000111788.10]
WARNING, no entry stored in dbm for [ENSG00000257612.2]
WARNING, no entry stored in dbm for [ENSG00000286797.1]
WARNING, no entry stored in dbm for [ENSG00000286797.1]
WARNING, no entry stored in dbm for [ENSG00000286797.1]
WARNING, no entry stored in dbm for [ENSG00000260719.1]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000260905.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000267727.1]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000228509.6]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000270182.1]
WARNING, no entry stored in dbm for [ENSG00000213362.3]
WARNING, no entry stored in dbm for [ENSG00000269504.3]
WARNING, no entry stored in dbm for [ENSG00000248636.7]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000277125.1]


	* STAR-Fusion complete.  See output: /tmp/nxf.PIzTXzsDjx/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)