File Info
- Filename
- aih-tih-sc-e08fa3-R1_A23YTGFLT4_1.fusions.csv
- Full Path
- s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/95/6bde636fb306a24f5e46963305dc44/aih-tih-sc-e08fa3-R1_A23YTGFLT4_1.fusions.csv
- Size
- 5.8 KB
- Task
- NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (aih-tih-sc-e08fa3-R1_A23YTGFLT4_1)
- Attempt
Content
View in new tab| Fusion | Databases | Score | Explained score | arriba | starfusion |
| IGL-@-ext--SNTA1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr22:22895372:-#chr20:33443486:-,junction_reads: 46,spanning_reads: 0,ffmp: 0.1526 | ||
| LINC00381--NKAIN2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr13:74426418:+#chr6:124355267:+,junction_reads: 29,spanning_reads: 0,ffmp: 0.0795 | ||
| GUCY1B2--NKAIN2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr13:51080751:-#chr6:124355267:+,junction_reads: 23,spanning_reads: 0,ffmp: 0.0454 | ||
| TLK2P1--AC110079.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:34039043:-#chr4:118595912:+,junction_reads: 22,spanning_reads: 0,ffmp: 0.0667 | ||
| TLK2--AC240565.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:62560126:+#chr17:106864:-,junction_reads: 16,spanning_reads: 0,ffmp: 0.0217 | ||
| AL049555.1--LLGL2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr6:54943178:+#chr17:75543397:+,junction_reads: 11,spanning_reads: 0,ffmp: 0.0371 | ||
| MET--GCC2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr7:116724249:+#chr2:108468980:+,junction_reads: 10,spanning_reads: 0,ffmp: 0.0338 | ||
| UBE2Q2P1--GOLGA6L10 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr15:84526781:-#chr15:82347629:-,junction_reads: 9,spanning_reads: 0,ffmp: 0.0152 | ||
| KCNMB2-AS1--ADGRL3 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr3:178860294:-#chr4:61676826:+,junction_reads: 9,spanning_reads: 0,ffmp: 0.0152 | ||
| BBOX1-AS1--ADGRL3 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr11:27220047:-#chr4:61676826:+,junction_reads: 9,spanning_reads: 0,ffmp: 0.0152 | ||
| TVP23C--CDRT4 | FusionGDB2 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * (0.000) | position: chr17:15503098#chr17:15440285,reading-frame: stop-codon,type: deletion/read-through,split_reads1: 87,split_reads2: 67,discordant_mates: 2,coverage1: 773,coverage2: 496,confidence: high | position: chr17:15503098:-#chr17:15440285:-,junction_reads: 7,spanning_reads: 1,ffmp: 0.027 |
| PDXDC1--NPIPB5 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr16:15030056:+#chr16:22513522:+,junction_reads: 7,spanning_reads: 2,ffmp: 0.0271 | ||
| PCDHA4--PCDHAC2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140809572#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 60,split_reads2: 87,discordant_mates: 3,coverage1: 987,coverage2: 587,confidence: high | ||
| PCDHA4--PCDHAC1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140809572#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 60,split_reads2: 87,discordant_mates: 3,coverage1: 987,coverage2: 587,confidence: high | ||
| PCDHA4--PCDHA13 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140809572#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 60,split_reads2: 87,discordant_mates: 3,coverage1: 987,coverage2: 587,confidence: high | ||
| PCDHGB2--PCDHGC4 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 43,split_reads2: 39,discordant_mates: 2,coverage1: 281,coverage2: 4723,confidence: high | ||
| PCDHGB2--PCDHGA11 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 43,split_reads2: 39,discordant_mates: 2,coverage1: 281,coverage2: 4723,confidence: high | ||
| PCDHGB2--PCDHGC5 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 43,split_reads2: 39,discordant_mates: 2,coverage1: 281,coverage2: 4723,confidence: high | ||
| PCDHGB2--PCDHGB7 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 43,split_reads2: 39,discordant_mates: 2,coverage1: 281,coverage2: 4723,confidence: high | ||
| PCDHGB2--PCDHGA8 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 43,split_reads2: 39,discordant_mates: 2,coverage1: 281,coverage2: 4723,confidence: high | ||
| PCDHGB2--PCDHGA10 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 43,split_reads2: 39,discordant_mates: 2,coverage1: 281,coverage2: 4723,confidence: high | ||
| PCDHGB2--PCDHGA9 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 43,split_reads2: 39,discordant_mates: 2,coverage1: 281,coverage2: 4723,confidence: high | ||
| PCDHGB2--PCDHGB6 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 43,split_reads2: 39,discordant_mates: 2,coverage1: 281,coverage2: 4723,confidence: high | ||
| PCDHGB2--PCDHGA12 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 43,split_reads2: 39,discordant_mates: 2,coverage1: 281,coverage2: 4723,confidence: high | ||
| PCDHGB2--PCDHGC3 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 43,split_reads2: 39,discordant_mates: 2,coverage1: 281,coverage2: 4723,confidence: high | ||
| STX16--NPEPL1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr20:58673711#chr20:58691724,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 32,split_reads2: 37,discordant_mates: 3,coverage1: 2802,coverage2: 242,confidence: high | ||
| CRYZL2P--SEC16B | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr1:178026155#chr1:177968039,reading-frame: .,type: deletion/read-through,split_reads1: 1,split_reads2: 20,discordant_mates: 0,coverage1: 37,coverage2: 318,confidence: high | ||
| KANSL1--ARL17B | Mitelman,FusionGDB2 | 0.312 | 0.5 * (0.125) + 0.5 * (0.500 + 0.000) | position: chr17:46094558#chr17:46352927,reading-frame: .,type: duplication,split_reads1: 0,split_reads2: 1,discordant_mates: 20,coverage1: 2078,coverage2: 2190,confidence: high |
29 rows