AIH curated blacklist: matched 3 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 220
Pass (FILTER=PASS): 32 (14.5%)
Fail (FILTER=FAIL): 188 (85.5%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 3
All 3 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 42
confidence_below_min(low<high): 28
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 17
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 15
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 14
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 5
total_reads_below_min(5.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 3
total_reads_below_min(3.0<8.0): 3
Breakdown by confidence:
high: 32 pass, 12 fail (total: 44)
low: 0 pass, 78 fail (total: 78)
medium: 0 pass, 98 fail (total: 98)
Arriba filter: 220 rows -> 32 PASS; wrote aih-tih-sc-8c7069-R1_A23YTGFLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-8c7069-R1_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-8c7069-R1_A23YTGFLT4_1.arriba.fusions.filter_summary.txt