[W::hts_idx_load3] The index file is older than the data file: aih-tih-sc-13d441-R1_A23YTGFLT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	268991144
Known Splicing Events:	265976736
Partial Novel Splicing Events:	1601095
Novel Splicing Events:	1311887
Filtered Splicing Events:	101426

Total splicing  Junctions:	582341
Known Splicing Junctions:	283332
Partial Novel Splicing Junctions:	167267
Novel Splicing Junctions:	131742

===================================================================
Create BED file ...
Create Interact file ...