Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6c/eb15a89c9640d08800fc5a8123d2ae/aih-tih-sc-816ec7-R1_A23YTGFLT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/83/e657762d8eb3926e4e5b8dfcb1bfd5/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/83/e657762d8eb3926e4e5b8dfcb1bfd5/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory