Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/72/cfbd8f319276e6e4b8f0223a40c959/aih-tih-sc-ecc0bc-R1_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-eb5d3959-7137-45a9-9f26-41f9201dcf7f/9d/27ef28c083f97facc14cc8364be994/dummy_file_fusioncatcher.txt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1f/d09cec8bb124a53f0c7a2478723025/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1f/d09cec8bb124a53f0c7a2478723025/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/fusion_report_db
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8e/f0d8b730bfffc35345a1c24debb1f7/aih-tih-sc-ecc0bc-R1_A23YTGFLT4_1.starfusion.starfusion.fusion_predictions.filtered_pass_only.tsv
==> STAGING COMPLETE (6 inputs)

Running application...
DAPK2--IGF1R
starfusion
arriba
TRIP4--SLTM
starfusion
arriba
SEMA4B--MCTP2
starfusion
arriba
RORA--AC026523.1
starfusion
arriba
RORA--LINC00923
starfusion
arriba
TLK2P1--AC110079.1
starfusion
TLK2--AC240565.1
starfusion
RORA--LINC02254
starfusion
arriba
MOCOS--KIAA1328
starfusion
arriba
CDH3--TANGO6
starfusion
TVP23C--CDRT4
arriba
FANCI--AC015660.1
arriba
FANCI--AC015660.5
arriba
PCDHA10--PCDHAC1
arriba
PCDHA10--PCDHAC2
arriba
PCDHA10--PCDHA13
arriba
DTNBP1--LARP4B
arriba

  0%|          | 0/17 [00:00<?, ?it/s]
Processing DAPK2--IGF1R:   0%|          | 0/17 [00:00<?, ?it/s]
Processing DAPK2--IGF1R:   6%|▌         | 1/17 [00:00<00:01,  9.23it/s]
Processing TRIP4--SLTM:   6%|▌         | 1/17 [00:00<00:01,  9.23it/s] 
Processing TRIP4--SLTM:  12%|█▏        | 2/17 [00:00<00:01,  9.47it/s]
Processing SEMA4B--MCTP2:  12%|█▏        | 2/17 [00:00<00:01,  9.47it/s]
Processing SEMA4B--MCTP2:  18%|█▊        | 3/17 [00:00<00:01,  9.55it/s]
Processing RORA--AC026523.1:  18%|█▊        | 3/17 [00:00<00:01,  9.55it/s]
Processing RORA--AC026523.1:  24%|██▎       | 4/17 [00:00<00:01,  9.58it/s]
Processing RORA--LINC00923:  24%|██▎       | 4/17 [00:00<00:01,  9.58it/s] 
Processing RORA--LINC00923:  29%|██▉       | 5/17 [00:00<00:01,  9.61it/s]
Processing TLK2P1--AC110079.1:  29%|██▉       | 5/17 [00:00<00:01,  9.61it/s]
Processing TLK2P1--AC110079.1:  35%|███▌      | 6/17 [00:00<00:01,  9.62it/s]
Processing TLK2--AC240565.1:  35%|███▌      | 6/17 [00:00<00:01,  9.62it/s]  
Processing TLK2--AC240565.1:  41%|████      | 7/17 [00:00<00:01,  9.63it/s]
Processing RORA--LINC02254:  41%|████      | 7/17 [00:00<00:01,  9.63it/s] 
Processing RORA--LINC02254:  47%|████▋     | 8/17 [00:00<00:00,  9.63it/s]
Processing MOCOS--KIAA1328:  47%|████▋     | 8/17 [00:00<00:00,  9.63it/s]
Processing MOCOS--KIAA1328:  53%|█████▎    | 9/17 [00:00<00:00,  9.64it/s]
Processing CDH3--TANGO6:  53%|█████▎    | 9/17 [00:00<00:00,  9.64it/s]   
Processing CDH3--TANGO6:  59%|█████▉    | 10/17 [00:01<00:00,  9.64it/s]
Processing TVP23C--CDRT4:  59%|█████▉    | 10/17 [00:01<00:00,  9.64it/s]
Processing TVP23C--CDRT4:  65%|██████▍   | 11/17 [00:01<00:00,  9.64it/s]
Processing FANCI--AC015660.1:  65%|██████▍   | 11/17 [00:01<00:00,  9.64it/s]
Processing FANCI--AC015660.1:  71%|███████   | 12/17 [00:01<00:00,  9.64it/s]
Processing FANCI--AC015660.5:  71%|███████   | 12/17 [00:01<00:00,  9.64it/s]
Processing FANCI--AC015660.5:  76%|███████▋  | 13/17 [00:01<00:00,  9.64it/s]
Processing PCDHA10--PCDHAC1:  76%|███████▋  | 13/17 [00:01<00:00,  9.64it/s] 
Processing PCDHA10--PCDHAC1:  82%|████████▏ | 14/17 [00:01<00:00,  9.64it/s]
Processing PCDHA10--PCDHAC2:  82%|████████▏ | 14/17 [00:01<00:00,  9.64it/s]
Processing PCDHA10--PCDHAC2:  88%|████████▊ | 15/17 [00:01<00:00,  9.65it/s]
Processing PCDHA10--PCDHA13:  88%|████████▊ | 15/17 [00:01<00:00,  9.65it/s]
Processing PCDHA10--PCDHA13:  94%|█████████▍| 16/17 [00:01<00:00,  9.65it/s]
Processing DTNBP1--LARP4B:  94%|█████████▍| 16/17 [00:01<00:00,  9.65it/s]  
Processing DTNBP1--LARP4B: 100%|██████████| 17/17 [00:01<00:00,  9.65it/s]
Processing DTNBP1--LARP4B: 100%|██████████| 17/17 [00:01<00:00,  9.62it/s]
cat: fusion_report_db/DB-timestamp.txt: No such file or directory