File Info
- Filename
- aih-tih-sc-ecc0bc-R1_A23YTGFLT4_1.fusions.csv
- Full Path
- s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1f/d09cec8bb124a53f0c7a2478723025/aih-tih-sc-ecc0bc-R1_A23YTGFLT4_1.fusions.csv
- Size
- 4.5 KB
- Task
- NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (aih-tih-sc-ecc0bc-R1_A23YTGFLT4_1)
- Attempt
Content
View in new tab| Fusion | Databases | Score | Explained score | arriba | starfusion |
| DAPK2--IGF1R | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr15:63924816#chr15:98707562,reading-frame: out-of-frame,type: inversion,split_reads1: 150,split_reads2: 90,discordant_mates: 0,coverage1: 858,coverage2: 16034,confidence: high | position: chr15:63924816:-#chr15:98707562:+,junction_reads: 251,spanning_reads: 0,ffmp: 1.0404 | |
| TRIP4--SLTM | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr15:64425631#chr15:58880107,reading-frame: out-of-frame,type: inversion,split_reads1: 22,split_reads2: 34,discordant_mates: 1,coverage1: 405,coverage2: 979,confidence: high | position: chr15:64425631:+#chr15:58880107:-,junction_reads: 58,spanning_reads: 1,ffmp: 0.2445 | |
| SEMA4B--MCTP2 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr15:90201735#chr15:94440176,reading-frame: out-of-frame,type: deletion,split_reads1: 16,split_reads2: 24,discordant_mates: 0,coverage1: 1714,coverage2: 309,confidence: high | position: chr15:90201735:+#chr15:94440176:+,junction_reads: 40,spanning_reads: 0,ffmp: 0.1658 | |
| RORA--AC026523.1 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr15:61229053#chr15:97559098,reading-frame: out-of-frame,type: duplication,split_reads1: 17,split_reads2: 18,discordant_mates: 0,coverage1: 2096,coverage2: 41,confidence: high | position: chr15:61229053:-#chr15:97559098:-,junction_reads: 36,spanning_reads: 0,ffmp: 0.1492 | |
| RORA--LINC00923 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr15:61229053#chr15:97576594,reading-frame: out-of-frame,type: duplication,split_reads1: 16,split_reads2: 10,discordant_mates: 1,coverage1: 2096,coverage2: 21,confidence: high | position: chr15:61229053:-#chr15:97576594:-,junction_reads: 26,spanning_reads: 1,ffmp: 0.1119 | |
| TLK2P1--AC110079.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:34039043:-#chr4:118595912:+,junction_reads: 19,spanning_reads: 0,ffmp: 0.0715 | ||
| TLK2--AC240565.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:62560126:+#chr17:106864:-,junction_reads: 16,spanning_reads: 0,ffmp: 0.0137 | ||
| RORA--LINC02254 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr15:61229053#chr15:97427952,reading-frame: out-of-frame,type: duplication,split_reads1: 8,split_reads2: 2,discordant_mates: 0,coverage1: 2096,coverage2: 4,confidence: high | position: chr15:61229053:-#chr15:97427952:-,junction_reads: 12,spanning_reads: 0,ffmp: 0.0497 | |
| MOCOS--KIAA1328 | 0.125 | 0.5 * (0.125 + 0.125) + 0.5 * () | position: chr18:36260175#chr18:36946249,reading-frame: out-of-frame,type: deletion,split_reads1: 9,split_reads2: 1,discordant_mates: 0,coverage1: 93,coverage2: 1,confidence: high | position: chr18:36260175:+#chr18:36946249:+,junction_reads: 11,spanning_reads: 0,ffmp: 0.0456 | |
| CDH3--TANGO6 | Mitelman,FusionGDB2 | 0.312 | 0.5 * (0.125) + 0.5 * (0.500 + 0.000) | position: chr16:68695923:+#chr16:68859884:+,junction_reads: 10,spanning_reads: 0,ffmp: 0.0415 | |
| TVP23C--CDRT4 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr17:15503098#chr17:15440285,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 18,split_reads2: 12,discordant_mates: 1,coverage1: 531,coverage2: 210,confidence: high | |
| FANCI--AC015660.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr15:89285218#chr15:99452777,reading-frame: out-of-frame,type: deletion,split_reads1: 15,split_reads2: 3,discordant_mates: 0,coverage1: 754,coverage2: 8,confidence: high | ||
| FANCI--AC015660.5 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr15:89285218#chr15:99452777,reading-frame: out-of-frame,type: deletion,split_reads1: 15,split_reads2: 3,discordant_mates: 0,coverage1: 754,coverage2: 8,confidence: high | ||
| PCDHA10--PCDHAC1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140858436#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 8,split_reads2: 7,discordant_mates: 0,coverage1: 196,coverage2: 523,confidence: high | ||
| PCDHA10--PCDHAC2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140858436#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 8,split_reads2: 7,discordant_mates: 0,coverage1: 196,coverage2: 523,confidence: high | ||
| PCDHA10--PCDHA13 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140858436#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 8,split_reads2: 7,discordant_mates: 0,coverage1: 196,coverage2: 523,confidence: high | ||
| DTNBP1--LARP4B | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr6:15651313#chr10:825282,reading-frame: out-of-frame,type: translocation/5'-5',split_reads1: 9,split_reads2: 1,discordant_mates: 0,coverage1: 426,coverage2: 455,confidence: high |
18 rows