AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 198
Pass (FILTER=PASS): 5 (2.5%)
Fail (FILTER=FAIL): 193 (97.5%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 56
confidence_below_min(low<high): 23
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 21
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 20
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 12
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 7
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 6
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 2
Breakdown by confidence:
high: 5 pass, 3 fail (total: 8)
low: 0 pass, 87 fail (total: 87)
medium: 0 pass, 103 fail (total: 103)
Arriba filter: 198 rows -> 5 PASS; wrote aih-tih-sc-cece97-R1_A23YTGFLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-cece97-R1_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-cece97-R1_A23YTGFLT4_1.arriba.fusions.filter_summary.txt