Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f3/9a890fec653b90975bbac1c1c44fa9/aih-tih-sc-69be7e-R1_A23YTGFLT4_1.starfusion.starfusion.fusion_predictions.filtered_pass_only.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-eb5d3959-7137-45a9-9f26-41f9201dcf7f/9d/27ef28c083f97facc14cc8364be994/dummy_file_fusioncatcher.txt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2f/eac86bd6124128510049d58bddceeb/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2f/eac86bd6124128510049d58bddceeb/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/fusion_report_db
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c6/a2ae17e1b8fa102a00604afd5236f0/aih-tih-sc-69be7e-R1_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
==> STAGING COMPLETE (6 inputs)

Running application...
SLBP--LETM1
starfusion
arriba
HNRNPR--TCEA3
starfusion
arriba
ANO6--ARID2
starfusion
VOPP1--TNS3
starfusion
arriba
MAP4K3--CRHR2
starfusion
arriba
TLK2P1--AC110079.1
starfusion
TLK2--FAM157A
starfusion
arriba
DHRS2--GSTM2
starfusion
WWTR1--AC079841.2
starfusion
ARID1B--AFDN
starfusion
BRPF1--ATG7
starfusion
arriba
SPPL2B--PSPN
starfusion
FBXO25--AC240565.1
starfusion
STX16--NPEPL1
arriba
AC005993.1--RGS6
arriba
TVP23C--CDRT4
arriba
AP000347.1--IGLL1
arriba
CCDC169--SOHLH2
arriba
SLBP--NSD2
arriba

  0%|          | 0/19 [00:00<?, ?it/s]
Processing SLBP--LETM1:   0%|          | 0/19 [00:00<?, ?it/s]
Processing SLBP--LETM1:   5%|▌         | 1/19 [00:00<00:01,  9.19it/s]
Processing HNRNPR--TCEA3:   5%|▌         | 1/19 [00:00<00:01,  9.19it/s]
Processing HNRNPR--TCEA3:  11%|█         | 2/19 [00:00<00:01,  9.43it/s]
Processing ANO6--ARID2:  11%|█         | 2/19 [00:00<00:01,  9.43it/s]  
Processing ANO6--ARID2:  16%|█▌        | 3/19 [00:00<00:01,  9.52it/s]
Processing VOPP1--TNS3:  16%|█▌        | 3/19 [00:00<00:01,  9.52it/s]
Processing VOPP1--TNS3:  21%|██        | 4/19 [00:00<00:01,  9.55it/s]
Processing MAP4K3--CRHR2:  21%|██        | 4/19 [00:00<00:01,  9.55it/s]
Processing MAP4K3--CRHR2:  26%|██▋       | 5/19 [00:00<00:01,  9.57it/s]
Processing TLK2P1--AC110079.1:  26%|██▋       | 5/19 [00:00<00:01,  9.57it/s]
Processing TLK2P1--AC110079.1:  32%|███▏      | 6/19 [00:00<00:01,  9.58it/s]
Processing TLK2--FAM157A:  32%|███▏      | 6/19 [00:00<00:01,  9.58it/s]     
Processing TLK2--FAM157A:  37%|███▋      | 7/19 [00:00<00:01,  9.60it/s]
Processing DHRS2--GSTM2:  37%|███▋      | 7/19 [00:00<00:01,  9.60it/s] 
Processing DHRS2--GSTM2:  42%|████▏     | 8/19 [00:00<00:01,  9.60it/s]
Processing WWTR1--AC079841.2:  42%|████▏     | 8/19 [00:00<00:01,  9.60it/s]
Processing WWTR1--AC079841.2:  47%|████▋     | 9/19 [00:00<00:01,  9.61it/s]
Processing ARID1B--AFDN:  47%|████▋     | 9/19 [00:00<00:01,  9.61it/s]     
Processing ARID1B--AFDN:  53%|█████▎    | 10/19 [00:01<00:00,  9.61it/s]
Processing BRPF1--ATG7:  53%|█████▎    | 10/19 [00:01<00:00,  9.61it/s] 
Processing BRPF1--ATG7:  58%|█████▊    | 11/19 [00:01<00:00,  9.61it/s]
Processing SPPL2B--PSPN:  58%|█████▊    | 11/19 [00:01<00:00,  9.61it/s]
Processing SPPL2B--PSPN:  63%|██████▎   | 12/19 [00:01<00:00,  9.61it/s]
Processing FBXO25--AC240565.1:  63%|██████▎   | 12/19 [00:01<00:00,  9.61it/s]
Processing FBXO25--AC240565.1:  68%|██████▊   | 13/19 [00:01<00:00,  9.61it/s]
Processing STX16--NPEPL1:  68%|██████▊   | 13/19 [00:01<00:00,  9.61it/s]     
Processing STX16--NPEPL1:  74%|███████▎  | 14/19 [00:01<00:00,  9.61it/s]
Processing AC005993.1--RGS6:  74%|███████▎  | 14/19 [00:01<00:00,  9.61it/s]
Processing AC005993.1--RGS6:  79%|███████▉  | 15/19 [00:01<00:00,  9.62it/s]
Processing TVP23C--CDRT4:  79%|███████▉  | 15/19 [00:01<00:00,  9.62it/s]   
Processing TVP23C--CDRT4:  84%|████████▍ | 16/19 [00:01<00:00,  9.61it/s]
Processing AP000347.1--IGLL1:  84%|████████▍ | 16/19 [00:01<00:00,  9.61it/s]
Processing AP000347.1--IGLL1:  89%|████████▉ | 17/19 [00:01<00:00,  9.62it/s]
Processing CCDC169--SOHLH2:  89%|████████▉ | 17/19 [00:01<00:00,  9.62it/s]  
Processing CCDC169--SOHLH2:  95%|█████████▍| 18/19 [00:01<00:00,  9.62it/s]
Processing SLBP--NSD2:  95%|█████████▍| 18/19 [00:01<00:00,  9.62it/s]     
Processing SLBP--NSD2: 100%|██████████| 19/19 [00:01<00:00,  9.62it/s]
Processing SLBP--NSD2: 100%|██████████| 19/19 [00:01<00:00,  9.59it/s]
cat: fusion_report_db/DB-timestamp.txt: No such file or directory