AIH curated blacklist: matched 16 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 214
Pass (FILTER=PASS): 27 (12.6%)
Fail (FILTER=FAIL): 187 (87.4%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 16
All 16 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 69
confidence_below_min(low<high): 15
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 14
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 14
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 9
confidence_below_min(medium<high);aih_curated_blacklist: 7
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 6
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 3
confidence_below_min(low<high);aih_curated_blacklist: 3
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0);aih_curated_blacklist: 3
Breakdown by confidence:
high: 27 pass, 2 fail (total: 29)
low: 0 pass, 85 fail (total: 85)
medium: 0 pass, 100 fail (total: 100)
Arriba filter: 214 rows -> 27 PASS; wrote aih-tih-sc-13d441-R1_A23YTGFLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-13d441-R1_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-13d441-R1_A23YTGFLT4_1.arriba.fusions.filter_summary.txt