File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6a/8b46c54d17c8f62e8972c9c0ad74ca/.command.err
Size
35.1 KB
Attempt
-ctat genome lib [/tmp/nxf.laFn224CnS/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.laFn224CnS/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.laFn224CnS/./star-fusion.preliminary
-sample contains 52859459 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.laFn224CnS/ctat_genome_lib_build_dir  -J /tmp/nxf.laFn224CnS/aih-tih-sc-fba77b-R1_A23YTGFLT4_1.Chimeric.out.junction  -O /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.laFn224CnS/aih-tih-sc-fba77b-R1_A23YTGFLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.laFn224CnS/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[750000], rate=72000.00/min -building interval tree based on /tmp/nxf.laFn224CnS/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[750000], rate=72115.38/min 
[760000], rate=71924.29/min -building interval tree based on /tmp/nxf.laFn224CnS/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes

[10000], rate=85714.29/min 
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[740000], rate=62623.41/min 
[750000], rate=62326.87/min -building interval tree based on /tmp/nxf.laFn224CnS/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

[10000], rate=50000.00/min 
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[750000], rate=60321.72/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.laFn224CnS/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 6000000.00 reads per min processed...  
 12000000.00 reads per min processed...  
 6000000.00 reads per min processed...  
 4800000.00 reads per min processed...  
 4285714.29 reads per min processed...  
 4500000.00 reads per min processed...  
 4200000.00 reads per min processed...  
 4363636.36 reads per min processed...  
 4153846.15 reads per min processed...  
 3750000.00 reads per min processed...  
 3666666.67 reads per min processed...  
 3789473.68 reads per min processed...  
 3714285.71 reads per min processed...  
 3652173.91 reads per min processed...  
 3600000.00 reads per min processed...  
 3692307.69 reads per min processed...  
 3923076.92 reads per min processed...  
 4000000.00 reads per min processed...  
 3931034.48 reads per min processed...  
 4000000.00 reads per min processed...  
 3937500.00 reads per min processed...  
 3882352.94 reads per min processed...  
 3942857.14 reads per min processed...  
 3789473.68 reads per min processed...  
 3846153.85 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.laFn224CnS/aih-tih-sc-fba77b-R1_A23YTGFLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.laFn224CnS/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -81624.851373
EM: Round [1] log likelihood: -81550.551294
EM: Round [2] log likelihood: -81518.760833
EM: Round [3] log likelihood: -81502.107109
EM: Round [4] log likelihood: -81492.794146
EM: Round [5] log likelihood: -81487.450211
EM: Round [6] log likelihood: -81484.315972
EM: Round [7] log likelihood: -81482.428723
EM: Round [8] log likelihood: -81481.257402
EM: Round [9] log likelihood: -81480.507095
EM: Round [10] log likelihood: -81480.011582
EM: Round [11] log likelihood: -81479.675039
EM: Round [12] log likelihood: -81479.440691
EM: Round [13] log likelihood: -81479.273897
EM: Round [14] log likelihood: -81479.152889
EM: Round [15] log likelihood: -81479.063604
EM: Round [16] log likelihood: -81478.996724
EM: Round [17] log likelihood: -81478.945933
EM: Round [18] log likelihood: -81478.906866
EM: Round [19] log likelihood: -81478.876453
EM: Round [20] log likelihood: -81478.852502
EM: Round [21] log likelihood: -81478.833429
EM: Round [22] log likelihood: -81478.818074
EM: Round [23] log likelihood: -81478.805582
EM: Round [24] log likelihood: -81478.795312
EM: Round [25] log likelihood: -81478.786782
EM: Round [26] log likelihood: -81478.779628
EM: Round [27] log likelihood: -81478.773570
EM: Round [28] log likelihood: -81478.768392
EM: Round [29] log likelihood: -81478.763926
EM: Round [30] log likelihood: -81478.760041
EM: Round [31] log likelihood: -81478.756635
EM: Round [32] log likelihood: -81478.753624
EM: Round [33] log likelihood: -81478.750945
EM: Round [34] log likelihood: -81478.748543
EM: Round [35] log likelihood: -81478.746377
EM: Round [36] log likelihood: -81478.744411
EM: Round [37] log likelihood: -81478.742619
EM: Round [38] log likelihood: -81478.740975
EM: Round [39] log likelihood: -81478.739462
EM: Round [40] log likelihood: -81478.738062
EM: Round [41] log likelihood: -81478.736762
EM: Round [42] log likelihood: -81478.735552
EM: Round [43] log likelihood: -81478.734420
EM: Round [44] log likelihood: -81478.733360
EM: Round [45] log likelihood: -81478.732363
EM: Round [46] log likelihood: -81478.731424
EM: Round [47] log likelihood: -81478.730538
EM: Round [48] log likelihood: -81478.729699
EM: Round [49] log likelihood: -81478.728905
EM: Round [50] log likelihood: -81478.728151
EM: Round [51] log likelihood: -81478.727434
EM: Round [52] log likelihood: -81478.726752
EM: Round [53] log likelihood: -81478.726103
EM: Round [54] log likelihood: -81478.725483
EM: Round [55] log likelihood: -81478.724891
EM: Round [56] log likelihood: -81478.724325
EM: Round [57] log likelihood: -81478.723784
EM: Round [58] log likelihood: -81478.723266
EM: Round [59] log likelihood: -81478.722771
EM: Round [60] log likelihood: -81478.722295
EM: Round [61] log likelihood: -81478.721839
EM: Round [62] log likelihood: -81478.721402
EM: Round [63] log likelihood: -81478.720983
EM: Round [64] log likelihood: -81478.720580
EM: Round [65] log likelihood: -81478.720192
EM: Round [66] log likelihood: -81478.719820
EM: Round [67] log likelihood: -81478.719463
EM: Round [68] log likelihood: -81478.719119
EM: Round [69] log likelihood: -81478.718788
EM: Round [70] log likelihood: -81478.718470
EM: Round [71] log likelihood: -81478.718163
EM: Round [72] log likelihood: -81478.717869
EM: Round [73] log likelihood: -81478.717585
EM: Round [74] log likelihood: -81478.717311
EM: Round [75] log likelihood: -81478.717048
EM: Round [76] log likelihood: -81478.716795
EM: Round [77] log likelihood: -81478.716550
EM: Round [78] log likelihood: -81478.716315
EM: Round [79] log likelihood: -81478.716088
EM: Round [80] log likelihood: -81478.715869
EM: Round [81] log likelihood: -81478.715658
EM: Round [82] log likelihood: -81478.715455
EM: Round [83] log likelihood: -81478.715259
EM: Round [84] log likelihood: -81478.715070
EM: Round [85] log likelihood: -81478.714888
EM: Round [86] log likelihood: -81478.714712
EM: Round [87] log likelihood: -81478.714542
EM: Round [88] log likelihood: -81478.714379
EM: Round [89] log likelihood: -81478.714221
EM: Round [90] log likelihood: -81478.714068
EM: Round [91] log likelihood: -81478.713921
EM: Round [92] log likelihood: -81478.713779
EM: Round [93] log likelihood: -81478.713643
EM: Round [94] log likelihood: -81478.713510
EM: Round [95] log likelihood: -81478.713383
EM: Round [96] log likelihood: -81478.713260
EM: Round [97] log likelihood: -81478.713141
EM: Round [98] log likelihood: -81478.713026
EM: Round [99] log likelihood: -81478.712915
EM: Round [100] log likelihood: -81478.712808
EM: Round [101] log likelihood: -81478.712705
EM: Round [102] log likelihood: -81478.712605
EM: Stopping iterations at round 102 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -81599.261538
EM: Round [1] log likelihood: -81535.554597
EM: Round [2] log likelihood: -81509.845897
EM: Round [3] log likelihood: -81496.830430
EM: Round [4] log likelihood: -81489.661466
EM: Round [5] log likelihood: -81485.560227
EM: Round [6] log likelihood: -81483.146491
EM: Round [7] log likelihood: -81481.683688
EM: Round [8] log likelihood: -81480.768748
EM: Round [9] log likelihood: -81480.177756
EM: Round [10] log likelihood: -81479.784047
EM: Round [11] log likelihood: -81479.514245
EM: Round [12] log likelihood: -81479.324643
EM: Round [13] log likelihood: -81479.188429
EM: Round [14] log likelihood: -81479.088663
EM: Round [15] log likelihood: -81479.014340
EM: Round [16] log likelihood: -81478.958125
EM: Round [17] log likelihood: -81478.915021
EM: Round [18] log likelihood: -81478.881548
EM: Round [19] log likelihood: -81478.855247
EM: Round [20] log likelihood: -81478.834350
EM: Round [21] log likelihood: -81478.817570
EM: Round [22] log likelihood: -81478.803956
EM: Round [23] log likelihood: -81478.792802
EM: Round [24] log likelihood: -81478.783577
EM: Round [25] log likelihood: -81478.775877
EM: Round [26] log likelihood: -81478.769392
EM: Round [27] log likelihood: -81478.763884
EM: Round [28] log likelihood: -81478.759167
EM: Round [29] log likelihood: -81478.755095
EM: Round [30] log likelihood: -81478.751554
EM: Round [31] log likelihood: -81478.748453
EM: Round [32] log likelihood: -81478.745717
EM: Round [33] log likelihood: -81478.743289
EM: Round [34] log likelihood: -81478.741120
EM: Round [35] log likelihood: -81478.739173
EM: Round [36] log likelihood: -81478.737414
EM: Round [37] log likelihood: -81478.735818
EM: Round [38] log likelihood: -81478.734363
EM: Round [39] log likelihood: -81478.733031
EM: Round [40] log likelihood: -81478.731806
EM: Round [41] log likelihood: -81478.730676
EM: Round [42] log likelihood: -81478.729630
EM: Round [43] log likelihood: -81478.728658
EM: Round [44] log likelihood: -81478.727753
EM: Round [45] log likelihood: -81478.726908
EM: Round [46] log likelihood: -81478.726117
EM: Round [47] log likelihood: -81478.725375
EM: Round [48] log likelihood: -81478.724677
EM: Round [49] log likelihood: -81478.724020
EM: Round [50] log likelihood: -81478.723400
EM: Round [51] log likelihood: -81478.722815
EM: Round [52] log likelihood: -81478.722260
EM: Round [53] log likelihood: -81478.721735
EM: Round [54] log likelihood: -81478.721237
EM: Round [55] log likelihood: -81478.720764
EM: Round [56] log likelihood: -81478.720314
EM: Round [57] log likelihood: -81478.719886
EM: Round [58] log likelihood: -81478.719479
EM: Round [59] log likelihood: -81478.719090
EM: Round [60] log likelihood: -81478.718720
EM: Round [61] log likelihood: -81478.718366
EM: Round [62] log likelihood: -81478.718029
EM: Round [63] log likelihood: -81478.717706
EM: Round [64] log likelihood: -81478.717398
EM: Round [65] log likelihood: -81478.717103
EM: Round [66] log likelihood: -81478.716820
EM: Round [67] log likelihood: -81478.716550
EM: Round [68] log likelihood: -81478.716291
EM: Round [69] log likelihood: -81478.716044
EM: Round [70] log likelihood: -81478.715806
EM: Round [71] log likelihood: -81478.715578
EM: Round [72] log likelihood: -81478.715360
EM: Round [73] log likelihood: -81478.715150
EM: Round [74] log likelihood: -81478.714949
EM: Round [75] log likelihood: -81478.714757
EM: Round [76] log likelihood: -81478.714571
EM: Round [77] log likelihood: -81478.714394
EM: Round [78] log likelihood: -81478.714223
EM: Round [79] log likelihood: -81478.714059
EM: Round [80] log likelihood: -81478.713901
EM: Round [81] log likelihood: -81478.713750
EM: Round [82] log likelihood: -81478.713604
EM: Round [83] log likelihood: -81478.713464
EM: Round [84] log likelihood: -81478.713330
EM: Round [85] log likelihood: -81478.713201
EM: Round [86] log likelihood: -81478.713076
EM: Round [87] log likelihood: -81478.712957
EM: Round [88] log likelihood: -81478.712841
EM: Round [89] log likelihood: -81478.712731
EM: Round [90] log likelihood: -81478.712624
EM: Round [91] log likelihood: -81478.712521
EM: Round [92] log likelihood: -81478.712423
EM: Stopping iterations at round 92 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.laFn224CnS/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.laFn224CnS/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.laFn224CnS/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 52859459 > /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.laFn224CnS/ctat_genome_lib_build_dir > /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.laFn224CnS/ctat_genome_lib_build_dir --annotate /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.laFn224CnS/ctat_genome_lib_build_dir
-done, see /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.laFn224CnS/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 552, filtered: 5806)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.laFn224CnS/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.laFn224CnS/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000220685.3]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000224078.15]
WARNING, no entry stored in dbm for [ENSG00000124097.7]
WARNING, no entry stored in dbm for [ENSG00000259203.2]
WARNING, no entry stored in dbm for [ENSG00000224310.1]
WARNING, no entry stored in dbm for [ENSG00000264985.4]
WARNING, no entry stored in dbm for [ENSG00000236229.1]
WARNING, no entry stored in dbm for [ENSG00000278969.1]
WARNING, no entry stored in dbm for [ENSG00000234996.4]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000272933.1]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000260236.1]
WARNING, no entry stored in dbm for [ENSG00000279713.1]
WARNING, no entry stored in dbm for [ENSG00000239791.2]
WARNING, no entry stored in dbm for [ENSG00000269540.1]
WARNING, no entry stored in dbm for [ENSG00000253559.1]
WARNING, no entry stored in dbm for [ENSG00000282458.1]
WARNING, no entry stored in dbm for [ENSG00000214892.4]
WARNING, no entry stored in dbm for [ENSG00000207113.1]
WARNING, no entry stored in dbm for [ENSG00000234996.4]
WARNING, no entry stored in dbm for [ENSG00000247556.6]
WARNING, no entry stored in dbm for [ENSG00000261713.6]
WARNING, no entry stored in dbm for [ENSG00000248791.1]
WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [ENSG00000287356.1]
WARNING, no entry stored in dbm for [ENSG00000224081.9]
WARNING, no entry stored in dbm for [ENSG00000244265.2]
WARNING, no entry stored in dbm for [ENSG00000243273.1]
WARNING, no entry stored in dbm for [ENSG00000251532.1]
WARNING, no entry stored in dbm for [ENSG00000253618.1]
WARNING, no entry stored in dbm for [ENSG00000250284.3]
WARNING, no entry stored in dbm for [ENSG00000224897.8]
WARNING, no entry stored in dbm for [ENSG00000272995.1]
WARNING, no entry stored in dbm for [ENSG00000176054.6]
WARNING, no entry stored in dbm for [ENSG00000232383.1]
WARNING, no entry stored in dbm for [ENSG00000283095.1]
WARNING, no entry stored in dbm for [ENSG00000265735.2]
WARNING, no entry stored in dbm for [ENSG00000278771.1]
WARNING, no entry stored in dbm for [ENSG00000206944.1]
WARNING, no entry stored in dbm for [ENSG00000261233.2]
WARNING, no entry stored in dbm for [ENSG00000277270.2]
WARNING, no entry stored in dbm for [ENSG00000233290.3]
WARNING, no entry stored in dbm for [ENSG00000256116.1]
WARNING, no entry stored in dbm for [ENSG00000224870.7]
WARNING, no entry stored in dbm for [ENSG00000237782.3]
WARNING, no entry stored in dbm for [ENSG00000189223.15]
WARNING, no entry stored in dbm for [ENSG00000241562.2]
WARNING, no entry stored in dbm for [ENSG00000258592.1]
WARNING, no entry stored in dbm for [ENSG00000259411.1]
WARNING, no entry stored in dbm for [ENSG00000232729.8]
WARNING, no entry stored in dbm for [ENSG00000245532.9]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000249464.6]
WARNING, no entry stored in dbm for [ENSG00000226337.3]
WARNING, no entry stored in dbm for [ENSG00000237298.10]
WARNING, no entry stored in dbm for [ENSG00000226313.1]
WARNING, no entry stored in dbm for [ENSG00000162840.4]
WARNING, no entry stored in dbm for [ENSG00000275691.2]
WARNING, no entry stored in dbm for [ENSG00000254055.2]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000229619.4]
WARNING, no entry stored in dbm for [ENSG00000273356.1]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000229539.1]
WARNING, no entry stored in dbm for [ENSG00000232164.1]
WARNING, no entry stored in dbm for [ENSG00000255050.1]
WARNING, no entry stored in dbm for [ENSG00000232527.8]
WARNING, no entry stored in dbm for [ENSG00000272779.1]
WARNING, no entry stored in dbm for [ENSG00000275852.1]
WARNING, no entry stored in dbm for [ENSG00000224559.2]
WARNING, no entry stored in dbm for [ENSG00000232471.3]
WARNING, no entry stored in dbm for [ENSG00000282508.2]
WARNING, no entry stored in dbm for [ENSG00000282508.2]
WARNING, no entry stored in dbm for [ENSG00000224316.1]
WARNING, no entry stored in dbm for [ENSG00000249669.10]
WARNING, no entry stored in dbm for [ENSG00000233446.2]
WARNING, no entry stored in dbm for [ENSG00000217159.2]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000186082.9]
WARNING, no entry stored in dbm for [ENSG00000230426.4]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000270903.1]
WARNING, no entry stored in dbm for [ENSG00000281344.1]
WARNING, no entry stored in dbm for [ENSG00000281344.1]
WARNING, no entry stored in dbm for [ENSG00000211459.2]
WARNING, no entry stored in dbm for [ENSG00000241549.8]
WARNING, no entry stored in dbm for [ENSG00000183666.17]
WARNING, no entry stored in dbm for [ENSG00000231013.2]
WARNING, no entry stored in dbm for [ENSG00000250427.1]
WARNING, no entry stored in dbm for [ENSG00000196295.12]
WARNING, no entry stored in dbm for [ENSG00000257252.6]
WARNING, no entry stored in dbm for [ENSG00000236991.6]
WARNING, no entry stored in dbm for [ENSG00000248539.1]
WARNING, no entry stored in dbm for [ENSG00000287597.1]
WARNING, no entry stored in dbm for [ENSG00000231793.5]
WARNING, no entry stored in dbm for [ENSG00000235123.5]
WARNING, no entry stored in dbm for [ENSG00000266733.7]
WARNING, no entry stored in dbm for [ENSG00000241743.4]
WARNING, no entry stored in dbm for [ENSG00000233025.1]
WARNING, no entry stored in dbm for [ENSG00000223959.8]
WARNING, no entry stored in dbm for [ENSG00000251623.2]
WARNING, no entry stored in dbm for [ENSG00000232229.6]
WARNING, no entry stored in dbm for [ENSG00000244161.1]
WARNING, no entry stored in dbm for [ENSG00000259217.2]
WARNING, no entry stored in dbm for [ENSG00000251842.1]
WARNING, no entry stored in dbm for [ENSG00000201852.1]
WARNING, no entry stored in dbm for [ENSG00000184224.3]
WARNING, no entry stored in dbm for [ENSG00000283662.1]
WARNING, no entry stored in dbm for [ENSG00000283326.1]
WARNING, no entry stored in dbm for [ENSG00000278428.1]
WARNING, no entry stored in dbm for [ENSG00000205634.7]
WARNING, no entry stored in dbm for [ENSG00000231028.9]
WARNING, no entry stored in dbm for [ENSG00000244723.3]
WARNING, no entry stored in dbm for [ENSG00000206066.3]
WARNING, no entry stored in dbm for [ENSG00000255108.1]
WARNING, no entry stored in dbm for [ENSG00000279147.1]
WARNING, no entry stored in dbm for [ENSG00000232512.6]
WARNING, no entry stored in dbm for [ENSG00000200131.1]
WARNING, no entry stored in dbm for [ENSG00000226476.6]
WARNING, no entry stored in dbm for [ENSG00000226476.6]
WARNING, no entry stored in dbm for [ENSG00000226476.6]
WARNING, no entry stored in dbm for [ENSG00000228044.3]
WARNING, no entry stored in dbm for [ENSG00000232576.2]
WARNING, no entry stored in dbm for [ENSG00000235020.5]
WARNING, no entry stored in dbm for [ENSG00000279609.1]
WARNING, no entry stored in dbm for [ENSG00000236777.1]
WARNING, no entry stored in dbm for [ENSG00000279032.1]
WARNING, no entry stored in dbm for [ENSG00000228274.4]
WARNING, no entry stored in dbm for [ENSG00000272734.1]
WARNING, no entry stored in dbm for [ENSG00000245532.9]
WARNING, no entry stored in dbm for [ENSG00000264112.1]
WARNING, no entry stored in dbm for [ENSG00000230576.1]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000286279.1]
WARNING, no entry stored in dbm for [ENSG00000251314.2]
WARNING, no entry stored in dbm for [ENSG00000282375.1]
WARNING, no entry stored in dbm for [ENSG00000287431.1]
WARNING, no entry stored in dbm for [ENSG00000260236.1]
WARNING, no entry stored in dbm for [ENSG00000285569.2]
WARNING, no entry stored in dbm for [ENSG00000259848.9]
WARNING, no entry stored in dbm for [ENSG00000235027.1]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000287677.2]
WARNING, no entry stored in dbm for [ENSG00000215263.2]
WARNING, no entry stored in dbm for [ENSG00000240674.1]
WARNING, no entry stored in dbm for [ENSG00000259603.1]
WARNING, no entry stored in dbm for [ENSG00000258017.2]
WARNING, no entry stored in dbm for [ENSG00000282051.1]
WARNING, no entry stored in dbm for [ENSG00000268120.1]
WARNING, no entry stored in dbm for [ENSG00000287859.1]
WARNING, no entry stored in dbm for [ENSG00000244161.1]
WARNING, no entry stored in dbm for [ENSG00000286125.1]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000264067.1]
WARNING, no entry stored in dbm for [ENSG00000214970.8]


	* STAR-Fusion complete.  See output: /tmp/nxf.laFn224CnS/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)