Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f4/ea7e1bfd07612c80b138d796182949/aih-tih-sc-01eb49-R1_A23YTGFLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e3/e18e7faa417fcf27aed7f62fac831b/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e3/e18e7faa417fcf27aed7f62fac831b/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory