File Info
- Filename
- aih-tih-sc-d1f1a3-R1_A23YTGFLT4_1.fusions.csv
- Full Path
- s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9d/13e09fc7cafcd21771ec686a90bdf2/aih-tih-sc-d1f1a3-R1_A23YTGFLT4_1.fusions.csv
- Size
- 4.8 KB
- Task
- NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (aih-tih-sc-d1f1a3-R1_A23YTGFLT4_1)
- Attempt
Content
View in new tab| Fusion | Databases | Score | Explained score | arriba | starfusion |
| TLK2P1--AC110079.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:34039043:-#chr4:118595912:+,junction_reads: 17,spanning_reads: 0,ffmp: 0.0481 | ||
| TLK2--AC240565.1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr17:62560126:+#chr17:106864:-,junction_reads: 15,spanning_reads: 0,ffmp: 0.0131 | ||
| PRSS27--TPSB2 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr16:2713529:-#chr16:1228814:-,junction_reads: 10,spanning_reads: 0,ffmp: 0.0275 | |
| AC013268.1--MALL | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr2:109947845:+#chr2:110091770:-,junction_reads: 9,spanning_reads: 0,ffmp: 0.0101 | ||
| PCDHGB2--PCDHGC3 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 66,split_reads2: 36,discordant_mates: 1,coverage1: 1014,coverage2: 9370,confidence: high | ||
| PCDHGB2--PCDHGC4 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 66,split_reads2: 36,discordant_mates: 1,coverage1: 1014,coverage2: 9370,confidence: high | ||
| PCDHGB2--PCDHGC5 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 66,split_reads2: 36,discordant_mates: 1,coverage1: 1014,coverage2: 9370,confidence: high | ||
| PCDHGB2--PCDHGA10 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 66,split_reads2: 36,discordant_mates: 1,coverage1: 1014,coverage2: 9370,confidence: high | ||
| PCDHGB2--PCDHGA8 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 66,split_reads2: 36,discordant_mates: 1,coverage1: 1014,coverage2: 9370,confidence: high | ||
| PCDHGB2--PCDHGB6 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 66,split_reads2: 36,discordant_mates: 1,coverage1: 1014,coverage2: 9370,confidence: high | ||
| PCDHGB2--PCDHGA11 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 66,split_reads2: 36,discordant_mates: 1,coverage1: 1014,coverage2: 9370,confidence: high | ||
| PCDHGB2--PCDHGB7 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 66,split_reads2: 36,discordant_mates: 1,coverage1: 1014,coverage2: 9370,confidence: high | ||
| PCDHGB2--PCDHGA12 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 66,split_reads2: 36,discordant_mates: 1,coverage1: 1014,coverage2: 9370,confidence: high | ||
| PCDHGB2--PCDHGA9 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:141362556#chr5:141494807,reading-frame: in-frame,type: deletion/read-through,split_reads1: 66,split_reads2: 36,discordant_mates: 1,coverage1: 1014,coverage2: 9370,confidence: high | ||
| TVP23C--CDRT4 | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr17:15503098#chr17:15440285,reading-frame: out-of-frame,type: deletion/read-through,split_reads1: 32,split_reads2: 42,discordant_mates: 0,coverage1: 697,coverage2: 266,confidence: high | |
| AC092807.3--DDAH1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr1:85496166#chr1:85358847,reading-frame: .,type: deletion/read-through,split_reads1: 27,split_reads2: 42,discordant_mates: 0,coverage1: 147,coverage2: 742,confidence: high | ||
| STON1--GTF2A1L | FusionGDB2 | 0.062 | 0.5 * (0.125) + 0.5 * (0.000) | position: chr2:48591855#chr2:48620851,reading-frame: in-frame,type: deletion/read-through,split_reads1: 15,split_reads2: 34,discordant_mates: 0,coverage1: 1101,coverage2: 149,confidence: high | |
| PCDHA10--PCDHAC1 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140858436#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 11,split_reads2: 10,discordant_mates: 1,coverage1: 195,coverage2: 687,confidence: high | ||
| PCDHA10--PCDHAC2 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140858436#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 11,split_reads2: 10,discordant_mates: 1,coverage1: 195,coverage2: 687,confidence: high | ||
| PCDHA10--PCDHA13 | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr5:140858436#chr5:140978949,reading-frame: in-frame,type: deletion/read-through,split_reads1: 11,split_reads2: 10,discordant_mates: 1,coverage1: 195,coverage2: 687,confidence: high | ||
| GTF2A1L--STON1-GTF2A1L | 0.062 | 0.5 * (0.125) + 0.5 * () | position: chr2:48671680#chr2:48776280,reading-frame: .,type: deletion/read-through,split_reads1: 8,split_reads2: 5,discordant_mates: 0,coverage1: 183,coverage2: 63,confidence: high |
22 rows