File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9e/6aff8c2c8e7f1a44f181c744972f3a/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:36:44
                             Started mapping on |	Jun 08 10:43:29
                                    Finished on |	Jun 08 11:46:56
       Mapping speed, Million of reads per hour |	280.46

                          Number of input reads |	296584083
                      Average input read length |	259
                                    UNIQUE READS:
                   Uniquely mapped reads number |	285064715
                        Uniquely mapped reads % |	96.12%
                          Average mapped length |	258.32
                       Number of splices: Total |	321720458
            Number of splices: Annotated (sjdb) |	316764172
                       Number of splices: GT/AG |	317821333
                       Number of splices: GC/AG |	2640526
                       Number of splices: AT/AC |	255163
               Number of splices: Non-canonical |	1003436
                      Mismatch rate per base, % |	0.18%
                         Deletion rate per base |	0.02%
                        Deletion average length |	1.94
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.75
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	8048542
             % of reads mapped to multiple loci |	2.71%
        Number of reads mapped to too many loci |	516768
             % of reads mapped to too many loci |	0.17%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	2474706
                 % of reads unmapped: too short |	0.83%
                Number of reads unmapped: other |	479352
                     % of reads unmapped: other |	0.16%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%