Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5d/8362b024c3f762c6c892d0f8e4dac5/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5c/dd5d99888ae13a0a4fbaa48ada1a6d/aih-tih-sc-f2fa3a-R1_A23YTGFLT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5d/8362b024c3f762c6c892d0f8e4dac5/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory