Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c7/82826de78a5e407e46d9c93e207f77/aih-tih-sc-5b8b4a-R1_A23YTGFLT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e1/c1e83b113b0338e6c24fbdedc13009/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e1/c1e83b113b0338e6c24fbdedc13009/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory