AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
================================================================================
ARRIBA FILTERING SUMMARY
================================================================================
Total fusions: 233
Pass (FILTER=PASS): 9 (3.9%)
Fail (FILTER=FAIL): 224 (96.1%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 37
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 31
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 26
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 21
confidence_below_min(low<high): 19
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 18
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 17
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 4
total_reads_below_min(6.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 4
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 3
total_reads_below_min(4.0<8.0): 2
Breakdown by confidence:
high: 9 pass, 9 fail (total: 18)
low: 0 pass, 128 fail (total: 128)
medium: 0 pass, 87 fail (total: 87)
Arriba filter: 233 rows -> 9 PASS; wrote aih-tih-sc-184b05-R1_A23YTGFLT4_1.arriba.fusions.filtered.tsv and aih-tih-sc-184b05-R1_A23YTGFLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: aih-tih-sc-184b05-R1_A23YTGFLT4_1.arriba.fusions.filter_summary.txt