File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4d/9effa8004a26d09d443ed63454c683/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:19:05
                             Started mapping on |	Jun 08 10:25:41
                                    Finished on |	Jun 08 11:33:58
       Mapping speed, Million of reads per hour |	260.50

                          Number of input reads |	296467196
                      Average input read length |	246
                                    UNIQUE READS:
                   Uniquely mapped reads number |	282656388
                        Uniquely mapped reads % |	95.34%
                          Average mapped length |	245.69
                       Number of splices: Total |	285769118
            Number of splices: Annotated (sjdb) |	281695286
                       Number of splices: GT/AG |	282410897
                       Number of splices: GC/AG |	1918451
                       Number of splices: AT/AC |	234039
               Number of splices: Non-canonical |	1205731
                      Mismatch rate per base, % |	0.26%
                         Deletion rate per base |	0.02%
                        Deletion average length |	1.82
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.76
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	10803706
             % of reads mapped to multiple loci |	3.64%
        Number of reads mapped to too many loci |	592003
             % of reads mapped to too many loci |	0.20%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	1990708
                 % of reads unmapped: too short |	0.67%
                Number of reads unmapped: other |	424391
                     % of reads unmapped: other |	0.14%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%