File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b1/09c2fef803c8ca02952ce38d9f1199/.command.err
Size
96.0 KB
Attempt
Error, chr discrepancy in gtf info for chr20	ENSEMBL	exon	29297095	29297246	.	-	.	gene_id "5_8S_rRNA^ENSG00000283568.1"; transcript_id "ENST00000637374.1"; gene_type "rRNA"; gene_name "5_8S_rRNA"; transcript_type "rRNA"; transcript_name "5_8S_rRNA.9-201"; exon_number 1; exon_id "ENSE00003799614.1"; level 3; transcript_support_level "NA"; tag "basic"; FI_gene_label "5_8S_rRNA^ENSG00000283568.1"; orig_coord_info "chr20,29297095,29297246,-";
Error, chr discrepancy in gtf info for chr20	ENSEMBL	exon	29741510	29741661	.	-	.	gene_id "5_8S_rRNA^ENSG00000283291.1"; transcript_id "ENST00000638132.1"; gene_type "rRNA"; gene_name "5_8S_rRNA"; transcript_type "rRNA"; transcript_name "5_8S_rRNA.8-201"; exon_number 1; exon_id "ENSE00003794628.1"; level 3; transcript_support_level "NA"; tag "basic"; FI_gene_label "5_8S_rRNA^ENSG00000283291.1"; orig_coord_info "chr20,29741510,29741661,-";
Error, chr discrepancy in gtf info for chr20	ENSEMBL	exon	30484925	30485076	.	-	.	gene_id "5_8S_rRNA^ENSG00000275877.1"; transcript_id "ENST00000614365.1"; gene_type "rRNA"; gene_name "5_8S_rRNA"; transcript_type "rRNA"; transcript_name "5_8S_rRNA.3-201"; exon_number 1; exon_id "ENSE00003742842.1"; level 3; transcript_support_level "NA"; tag "basic"; FI_gene_label "5_8S_rRNA^ENSG00000275877.1"; orig_coord_info "chr20,30484925,30485076,-";
Error, chr discrepancy in gtf info for chr21	ENSEMBL	exon	8256781	8256933	.	+	.	gene_id "5_8S_rRNA^ENSG00000277739.1"; transcript_id "ENST00000610460.1"; gene_type "rRNA"; gene_name "5_8S_rRNA"; transcript_type "rRNA"; transcript_name "5_8S_rRNA.5-201"; exon_number 1; exon_id "ENSE00003746458.1"; level 3; transcript_support_level "NA"; tag "basic"; FI_gene_label "5_8S_rRNA^ENSG00000277739.1"; orig_coord_info "chr21,8256781,8256933,+";
Error, chr discrepancy in gtf info for chr22	ENSEMBL	exon	11249809	11249959	.	-	.	gene_id "5_8S_rRNA^ENSG00000276871.1"; transcript_id "ENST00000612732.1"; gene_type "rRNA"; gene_name "5_8S_rRNA"; transcript_type "rRNA"; transcript_name "5_8S_rRNA.4-201"; exon_number 1; exon_id "ENSE00003735240.1"; level 3; transcript_support_level "NA"; tag "basic"; FI_gene_label "5_8S_rRNA^ENSG00000276871.1"; orig_coord_info "chr22,11249809,11249959,-";
Done.
-parsing GTF file: /tmp/nxf.2o2Rfz1nfN/aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1.gtf
* Running CMD: /usr/local/bin/STAR  --runThreadN 8  --genomeDir /tmp/nxf.2o2Rfz1nfN/ctat_genome_lib_build_dir/ref_genome.fa.star.idx  --outSAMtype BAM SortedByCoordinate  --twopassMode None  --alignSJDBoverhangMin 10  --genomeSuffixLengthMax 10000 --limitBAMsortRAM 47271261705  --alignInsertionFlush Right   --alignMatesGapMax 100000  --alignIntronMax 100000  --outSAMattributes All  --readFilesIn /tmp/nxf.2o2Rfz1nfN/aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1_1.fastp.fastq.gz /tmp/nxf.2o2Rfz1nfN/aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1_2.fastp.fastq.gz  --genomeFastaFiles /tmp/nxf.2o2Rfz1nfN/fi_workdir/aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1.fa  --outSAMfilter KeepAllAddedReferences  --sjdbGTFfile /tmp/nxf.2o2Rfz1nfN/fi_workdir/aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1.gtf  --alignSJstitchMismatchNmax 5 -1 5 5  --scoreGapNoncan -6  --readFilesCommand 'gunzip -c' 
* Running CMD: mv Aligned.sortedByCoord.out.bam aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1.star.sortedByCoord.out.bam
* Running CMD: samtools index aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1.star.sortedByCoord.out.bam
11:10:31 : INFO : Done.
-parsing GTF file: /tmp/nxf.2o2Rfz1nfN/fi_workdir/aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1.gtf
-parsing /tmp/nxf.2o2Rfz1nfN/fi_workdir/aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1.star.cSorted.dupsMarked.bam

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[4660000]   -done parsing /tmp/nxf.2o2Rfz1nfN/fi_workdir/aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1.star.cSorted.dupsMarked.bam.  Extracting junction info.
junction read elimination tally: $VAR1 = {
          'num genes matched < 2' => 90,
          'num_hits: 3 != num_counted_on_fusion_contigs 2 ' => 202,
          'num_hits: 4 != num_counted_on_fusion_contigs 3 ' => 12,
          'low complexity anchor region' => 8,
          'excessive soft clipping' => 33751,
          'exons hit < 2' => 2,
          'small anchor length' => 16,
          'num_hits: 4 != num_counted_on_fusion_contigs 2 ' => 52,
          'num_hits: 2 != num_counted_on_fusion_contigs 1 ' => 258,
          'num_hits: 3 != num_counted_on_fusion_contigs 1 ' => 71,
          'seq-similar region overlap' => 304,
          ' ** passed ** ' => 6748,
          'num_hits: 6 != num_counted_on_fusion_contigs 3 ' => 42,
          'num_hits: 4 != num_counted_on_fusion_contigs 1 ' => 1,
          'per_id < 96' => 17061
        };
-writing fusion junction support info.
-outputting the spanning read info: /tmp/nxf.2o2Rfz1nfN/fi_workdir/aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1.star.cSorted.dupsMarked.bam.fusion_spanning_info.
 - counting read alignments among fusion contigs.

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[78000]   -fusion SPANNING read extraction for scaff: AATF--AC243830.2

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[78000]   -fusion SPANNING read extraction for scaff: AATF--AC243830.3

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[80000]   -fusion SPANNING read extraction for scaff: AKAP7--PTPRK

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[90000]   -fusion SPANNING read extraction for scaff: AMOTL2--ME1

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[12000]   -fusion SPANNING read extraction for scaff: ATXN8OS--KLHL1

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[14000]   -fusion SPANNING read extraction for scaff: C1QTNF3--AMACR

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[38000]   -fusion SPANNING read extraction for scaff: CACNB1--ADAP2

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[20000]   -fusion SPANNING read extraction for scaff: CILK1--AL033504.1

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[108000]   -fusion SPANNING read extraction for scaff: ERBB4--AL020994.1

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[32000]   -fusion SPANNING read extraction for scaff: EXT1--AC084114.1

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[36000]   -fusion SPANNING read extraction for scaff: EXT1--MED30

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[57000]   -fusion SPANNING read extraction for scaff: FBXL20--LRRC37A11P

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[46000]   
[47000]   -fusion SPANNING read extraction for scaff: FLACC1--TRAK2

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[52000]   -fusion SPANNING read extraction for scaff: FSIP1--AC013652.1

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[11000]   -fusion SPANNING read extraction for scaff: KLRC4--KLRK1

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[79000]   -fusion SPANNING read extraction for scaff: LINC02693--AATF

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[427000]   -fusion SPANNING read extraction for scaff: NF1--IKZF3

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[92000]   -fusion SPANNING read extraction for scaff: NFKB2--DENND10

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[57000]   -fusion SPANNING read extraction for scaff: NPEPPSP1--AC003101.1

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[57000]   -fusion SPANNING read extraction for scaff: NPEPPSP1--MIR4725

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[211000]   
[212000]   -fusion SPANNING read extraction for scaff: NSD3--5_8S_rRNA

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[211000]   
[212000]   -fusion SPANNING read extraction for scaff: NSD3--CR383658.1

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[55000]   
[56000]   -fusion SPANNING read extraction for scaff: PAPSS1--HADH

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[27000]   
[28000]   -fusion SPANNING read extraction for scaff: PCDHA10--PCDHAC1

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[27000]   
[28000]   -fusion SPANNING read extraction for scaff: PCDHA10--PCDHAC2

[1000]   
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[28000]   
[29000]   -fusion SPANNING read extraction for scaff: PCDHA10--PCDHA13

[1000]   
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[19000]   -fusion SPANNING read extraction for scaff: PCDHA4--PCDHAC1

[1000]   
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[19000]   -fusion SPANNING read extraction for scaff: PCDHA4--PCDHAC2

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[19000]   
[20000]   -fusion SPANNING read extraction for scaff: PCDHA4--PCDHA13

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[423000]   
[424000]   -fusion SPANNING read extraction for scaff: PGAP3--MED1

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[127000]   
[128000]   -fusion SPANNING read extraction for scaff: PHF12--HSPA4L

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[115000]   -fusion SPANNING read extraction for scaff: PHF12--LINC02693

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[118000]   
[119000]   -fusion SPANNING read extraction for scaff: PHF12--RPL21P120

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[150000]   -fusion SPANNING read extraction for scaff: PREX1--MAP1LC3A

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[74000]   -fusion SPANNING read extraction for scaff: PTPRK--TRDN

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[46000]   -fusion SPANNING read extraction for scaff: RANBP9--AKAP7

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[20000]   -fusion SPANNING read extraction for scaff: RAPGEF5--UNC5D

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[159000]   
[160000]   -fusion SPANNING read extraction for scaff: RAPGEF5--EGFR

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[248000]   -fusion SPANNING read extraction for scaff: RERE--SHANK2

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[6000]   -fusion SPANNING read extraction for scaff: RIMS1--TRDN

[1000]   -fusion SPANNING read extraction for scaff: RNU4-66P--TRDN

[1000]   
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[8000]   -fusion SPANNING read extraction for scaff: RNU6-54P--KLHL1

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[148000]   
[149000]   -fusion SPANNING read extraction for scaff: RPL23A--GOSR1

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[65000]   
[66000]   -fusion SPANNING read extraction for scaff: SMG7--CACNA1E

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[82000]   -fusion SPANNING read extraction for scaff: STK4--ARHGEF3

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[13000]   -fusion SPANNING read extraction for scaff: STON1--GTF2A1L

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[96000]   
[97000]   -fusion SPANNING read extraction for scaff: STX16--NPEPL1

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[41000]   -fusion SPANNING read extraction for scaff: TLK2--AC240565.1

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[41000]   
[42000]   -fusion SPANNING read extraction for scaff: TLK2--FAM157A

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[8000]   -fusion SPANNING read extraction for scaff: TLK2P1--AC110079.1

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[41000]   -fusion SPANNING read extraction for scaff: TMTC2--ACSS3

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[88000]   
[89000]   -fusion SPANNING read extraction for scaff: TRAK1--ULK4

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[372000]   -fusion SPANNING read extraction for scaff: TRPS1--LINC00824

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[22000]   -fusion SPANNING read extraction for scaff: TVP23C--CDRT4
-filtered reads reasons: $VAR1 = {
          'seq similar region alignment' => 30276,
          'lacks exon overlap' => 64288
        };
EM: Starting log likelihood: -11266.373384
EM: Round [1] log likelihood: -11264.432884
EM: Round [2] log likelihood: -11264.017460
EM: Round [3] log likelihood: -11263.650587
EM: Round [4] log likelihood: -11263.323048
EM: Round [5] log likelihood: -11263.029602
EM: Round [6] log likelihood: -11262.765881
EM: Round [7] log likelihood: -11262.528204
EM: Round [8] log likelihood: -11262.313450
EM: Round [9] log likelihood: -11262.118951
EM: Round [10] log likelihood: -11261.942415
EM: Round [11] log likelihood: -11261.781863
EM: Round [12] log likelihood: -11261.635575
EM: Round [13] log likelihood: -11261.502051
EM: Round [14] log likelihood: -11261.379976
EM: Round [15] log likelihood: -11261.268195
EM: Round [16] log likelihood: -11261.165687
EM: Round [17] log likelihood: -11261.071549
EM: Round [18] log likelihood: -11260.984978
EM: Round [19] log likelihood: -11260.905261
EM: Round [20] log likelihood: -11260.831759
EM: Round [21] log likelihood: -11260.763900
EM: Round [22] log likelihood: -11260.701171
EM: Round [23] log likelihood: -11260.643113
EM: Round [24] log likelihood: -11260.589310
EM: Round [25] log likelihood: -11260.539387
EM: Round [26] log likelihood: -11260.493007
EM: Round [27] log likelihood: -11260.449863
EM: Round [28] log likelihood: -11260.409678
EM: Round [29] log likelihood: -11260.372201
EM: Round [30] log likelihood: -11260.337202
EM: Round [31] log likelihood: -11260.304474
EM: Round [32] log likelihood: -11260.273828
EM: Round [33] log likelihood: -11260.245092
EM: Round [34] log likelihood: -11260.218109
EM: Round [35] log likelihood: -11260.192736
EM: Round [36] log likelihood: -11260.168842
EM: Round [37] log likelihood: -11260.146309
EM: Round [38] log likelihood: -11260.125027
EM: Round [39] log likelihood: -11260.104896
EM: Round [40] log likelihood: -11260.085826
EM: Round [41] log likelihood: -11260.067734
EM: Round [42] log likelihood: -11260.050543
EM: Round [43] log likelihood: -11260.034184
EM: Round [44] log likelihood: -11260.018592
EM: Round [45] log likelihood: -11260.003709
EM: Round [46] log likelihood: -11259.989481
EM: Round [47] log likelihood: -11259.975860
EM: Round [48] log likelihood: -11259.962800
EM: Round [49] log likelihood: -11259.950260
EM: Round [50] log likelihood: -11259.938202
EM: Round [51] log likelihood: -11259.926591
EM: Round [52] log likelihood: -11259.915396
EM: Round [53] log likelihood: -11259.904587
EM: Round [54] log likelihood: -11259.894136
EM: Round [55] log likelihood: -11259.884021
EM: Round [56] log likelihood: -11259.874216
EM: Round [57] log likelihood: -11259.864703
EM: Round [58] log likelihood: -11259.855462
EM: Round [59] log likelihood: -11259.846475
EM: Round [60] log likelihood: -11259.837726
EM: Round [61] log likelihood: -11259.829200
EM: Round [62] log likelihood: -11259.820883
EM: Round [63] log likelihood: -11259.812763
EM: Round [64] log likelihood: -11259.804829
EM: Round [65] log likelihood: -11259.797068
EM: Round [66] log likelihood: -11259.789473
EM: Round [67] log likelihood: -11259.782033
EM: Round [68] log likelihood: -11259.774740
EM: Round [69] log likelihood: -11259.767587
EM: Round [70] log likelihood: -11259.760566
EM: Round [71] log likelihood: -11259.753671
EM: Round [72] log likelihood: -11259.746896
EM: Round [73] log likelihood: -11259.740235
EM: Round [74] log likelihood: -11259.733682
EM: Round [75] log likelihood: -11259.727234
EM: Round [76] log likelihood: -11259.720885
EM: Round [77] log likelihood: -11259.714632
EM: Round [78] log likelihood: -11259.708470
EM: Round [79] log likelihood: -11259.702397
EM: Round [80] log likelihood: -11259.696408
EM: Round [81] log likelihood: -11259.690501
EM: Round [82] log likelihood: -11259.684673
EM: Round [83] log likelihood: -11259.678920
EM: Round [84] log likelihood: -11259.673242
EM: Round [85] log likelihood: -11259.667635
EM: Round [86] log likelihood: -11259.662097
EM: Round [87] log likelihood: -11259.656626
EM: Round [88] log likelihood: -11259.651220
EM: Round [89] log likelihood: -11259.645878
EM: Round [90] log likelihood: -11259.640597
EM: Round [91] log likelihood: -11259.635377
EM: Round [92] log likelihood: -11259.630215
EM: Round [93] log likelihood: -11259.625110
EM: Round [94] log likelihood: -11259.620062
EM: Round [95] log likelihood: -11259.615068
EM: Round [96] log likelihood: -11259.610128
EM: Round [97] log likelihood: -11259.605240
EM: Round [98] log likelihood: -11259.600404
EM: Round [99] log likelihood: -11259.595617
EM: Round [100] log likelihood: -11259.590880
EM: Round [101] log likelihood: -11259.586192
EM: Round [102] log likelihood: -11259.581551
EM: Round [103] log likelihood: -11259.576957
EM: Round [104] log likelihood: -11259.572409
EM: Round [105] log likelihood: -11259.567906
EM: Round [106] log likelihood: -11259.563447
EM: Round [107] log likelihood: -11259.559032
EM: Round [108] log likelihood: -11259.554660
EM: Round [109] log likelihood: -11259.550331
EM: Round [110] log likelihood: -11259.546043
EM: Round [111] log likelihood: -11259.541796
EM: Round [112] log likelihood: -11259.537590
EM: Round [113] log likelihood: -11259.533424
EM: Round [114] log likelihood: -11259.529297
EM: Round [115] log likelihood: -11259.525209
EM: Round [116] log likelihood: -11259.521159
EM: Round [117] log likelihood: -11259.517147
EM: Round [118] log likelihood: -11259.513173
EM: Round [119] log likelihood: -11259.509235
EM: Round [120] log likelihood: -11259.505334
EM: Round [121] log likelihood: -11259.501469
EM: Round [122] log likelihood: -11259.497639
EM: Round [123] log likelihood: -11259.493844
EM: Round [124] log likelihood: -11259.490084
EM: Round [125] log likelihood: -11259.486358
EM: Round [126] log likelihood: -11259.482666
EM: Round [127] log likelihood: -11259.479007
EM: Round [128] log likelihood: -11259.475382
EM: Round [129] log likelihood: -11259.471788
EM: Round [130] log likelihood: -11259.468228
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EM: Round [591] log likelihood: -11259.040794
EM: Round [592] log likelihood: -11259.040689
EM: Round [593] log likelihood: -11259.040585
EM: Round [594] log likelihood: -11259.040481
EM: Round [595] log likelihood: -11259.040378
EM: Round [596] log likelihood: -11259.040276
EM: Round [597] log likelihood: -11259.040174
EM: Round [598] log likelihood: -11259.040073
EM: Round [599] log likelihood: -11259.039973
EM: Round [600] log likelihood: -11259.039874
EM: Stopping iterations at round 600 due to insufficient improvement in likelihood.
[bam_sort_core] merging from 0 files and 8 in-memory blocks...
-extracting read coordinates from /tmp/nxf.2o2Rfz1nfN/aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1.consolidated.bam into /tmp/nxf.2o2Rfz1nfN/aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1.consolidated.bam.read_coords

CMD: touch /tmp/nxf.2o2Rfz1nfN/aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1.consolidated.bam.read_coords.ok
CMD: /usr/bin/sort --parallel=1 -S10G -T . -k1,1 -k2,2 -k4,4n /tmp/nxf.2o2Rfz1nfN/aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1.consolidated.bam.read_coords > /tmp/nxf.2o2Rfz1nfN/aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1.consolidated.bam.read_coords.sort_by_readname
CMD: /usr/bin/sort --parallel=1 -S10G -T . -k1,1 -k3,3n /tmp/nxf.2o2Rfz1nfN/aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1.consolidated.bam.frag_coords > /tmp/nxf.2o2Rfz1nfN/aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1.consolidated.bam.frag_coords.coord_sorted
CMD: /usr/local/src/STAR-Fusion/FusionInspector/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.2o2Rfz1nfN/fi_workdir/aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1.fusion_preds.coalesced.summary.EMadj.min_frag_thresh.wSpliceInfo --genome_lib_dir ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionInspector/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.2o2Rfz1nfN/fi_workdir/aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1.fusion_preds.coalesced.summary.EMadj.min_frag_thresh.wSpliceInfo.post_blast_filter  --genome_lib_dir ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 50 
CMD: cp /tmp/nxf.2o2Rfz1nfN/fi_workdir/aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1.fusion_preds.coalesced.summary.EMadj.min_frag_thresh.wSpliceInfo.post_blast_filter.post_promisc_filter /tmp/nxf.2o2Rfz1nfN/aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1.post_blast_and_promiscuity_filter
-done, see /tmp/nxf.2o2Rfz1nfN/aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1.post_blast_and_promiscuity_filter.annot_filter.pass
EM: Starting log likelihood: -10731.030005
EM: Round [1] log likelihood: -10730.368708
EM: Round [2] log likelihood: -10730.368272
EM: Round [3] log likelihood: -10730.368271
EM: Stopping iterations at round 3 due to insufficient improvement in likelihood.
-total frags in /tmp/nxf.2o2Rfz1nfN/aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1_1.fastp.fastq.gz: 296397279
Warning - not locating file: /tmp/nxf.2o2Rfz1nfN/aih-tih-sc-6d9e6f-R1_A23YTGFLT4_1.gmap_trinity_GG.fusions.gff3.bed
WARNING, no entry stored in dbm for [ENSG00000212719.13]
WARNING, no entry stored in dbm for [ENSG00000212719.13]
WARNING, no entry stored in dbm for [ENSG00000212719.13]
WARNING, no entry stored in dbm for [ENSG00000212719.13]
WARNING, no entry stored in dbm for [ENSG00000212719.13]
WARNING, no entry stored in dbm for [ENSG00000212719.13]
WARNING, no entry stored in dbm for [ENSG00000212719.13]
WARNING, no entry stored in dbm for [ENSG00000212719.13]
WARNING, no entry stored in dbm for [ENSG00000212719.13]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000259345.7]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000212719.13]
WARNING, no entry stored in dbm for [ENSG00000212719.13]
WARNING, no entry stored in dbm for [ENSG00000223726.1]
WARNING, no entry stored in dbm for [ENSG00000214553.10]
WARNING, no entry stored in dbm for [ENSG00000214553.10]
WARNING, no entry stored in dbm for [ENSG00000214553.10]
WARNING, no entry stored in dbm for [ENSG00000214553.10]
WARNING, no entry stored in dbm for [ENSG00000267198.1]
WARNING, no entry stored in dbm for [ENSG00000272134.1]
WARNING, no entry stored in dbm for [ENSG00000267198.1]
WARNING, no entry stored in dbm for [ENSG00000272134.1]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000254275.6]
WARNING, no entry stored in dbm for [ENSG00000274487.2]
WARNING, no entry stored in dbm for [ENSG00000228768.3]
ls: cannot access 'IGV_inputs': No such file or directory