Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2d/9f6f13d722d2308258e1088e309efc/aih-tih-sc-ffabe0-R1_A23YTGFLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir/ref_genome.fa
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b0/713e21250df1c7c965dbb90d70ecde/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b0/713e21250df1c7c965dbb90d70ecde/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b3/06eebbe3e192e9e38205c418e02a82/aih-tih-sc-ffabe0-R1_A23YTGFLT4_1.Aligned.sortedByCoord.out.bam.bai
==> STAGING COMPLETE (5 inputs)

ls: *.sam: No such file or directory
ls: *.csi: No such file or directory
ls: *.crai: No such file or directory