Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/90/0b3c454d7de66c4a5d97950b94a1a2/aih-tih-sc-816ec7-R1_A23YTGFLT4_1.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/68/12bf36179b5cd07ac24612864199a9/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/68/12bf36179b5cd07ac24612864199a9/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory