.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_INDEX_ALIGNMENT_CRAM (NTC_0001_0001_A23YTGFLT4_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/be/20559b063b5c00ffb2df376ac3adea/.command.log
Size: 502 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_INDEX_ALIGNMENT_CRAM (NTC_0001_0001_A23YTGFLT4_1)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/83/7dfd8e453dd4d8ebf0dc8ac097ef9d/NTC_0001_0001_A23YTGFLT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/be/20559b063b5c00ffb2df376ac3adea/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/be/20559b063b5c00ffb2df376ac3adea/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory